Click here to switch to the map view.

The map label for this gene is 108811204

Identifier: 108811204

GI number: 108811204

Start: 1198154

End: 1198684

Strand: Reverse

Name: 108811204

Synonym: YPN_1039

Alternate gene names: NA

Gene position: 1198684-1198154 (Counterclockwise)

Preceding gene: 108811205

Following gene: 108811203

Centisome position: 26.43

GC content: 45.57

Gene sequence:

>531_bases
ATGCTTAAGAGAAAATGGCTCAGCATCGCGGTTATTATCGTTGCCCTGATCATGGTGAATATCTCTATTTATCAGAAACA
ACATTTGTTGGCTAAAGGTGACATCATTATTCTGGAACTGGCCCCGGTGGATCCCCGCTCATTGATGCAGGGTGATTATA
TGGCGCTGAGTTATGCCCTTGTAGCGCCATTCAATGAACAATTCAATGCAGAACAAGAAAAATGCAGAGAAGAGCCTTTA
CTACTTTGTCCTGAGTCCAAAAGGCGGCTAATTGTTGAACTCGACGATCGCCAGCGGGCCACAGCGGCCAGAATTGATCA
GGGCGAGCCTCTGGCAGATAACCAACATTATTTACAATACCGCTTTAAAGGCAGGTCTATTCAGATAGGAACGGATGCCT
ATTTTTTCCAGGAAGGACATGCAGAAGATTACGTCAATGCACGCTACGGTGAGTTTCGTGTTGCTAAAGATGGTTCGGCG
TTGCTGACCCATTTACTGGATGCCGATTTGCAGCGCATAGAGAATAAGTAA

Upstream 100 bases:

>100_bases
TTGTTGTATAAATCATTGTTATTAATTGGGGGGGGTGTCTTGCTGCTGGTTTTGGCCGGCGTATTGAATCGAGTACTCTC
TGCTGGGGAGGTCAATCAAC

Downstream 100 bases:

>100_bases
TCCTTAAACAATAAAAAAGAACCGTCTGGCCCCATGCCAACCCGTTATCGCGCTTATATTCACGGATGGTATACCCCCGT
ATTGATGGGGGTATACCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPL
LLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA
LLTHLLDADLQRIENK

Sequences:

>Translated_176_residues
MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPL
LLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA
LLTHLLDADLQRIENK
>Mature_176_residues
MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYALVAPFNEQFNAEQEKCREEPL
LLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQYRFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSA
LLTHLLDADLQRIENK

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20237; Mature: 20237

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHCCCHHHEEEEE
VAPFNEQFNAEQEKCREEPLLLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQY
ECCCCHHCCCHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEE
RFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLTHLLDADLQRIENK
EECCCEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKRKWLSIAVIIVALIMVNISIYQKQHLLAKGDIIILELAPVDPRSLMQGDYMALSYAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHCCCHHHEEEEE
VAPFNEQFNAEQEKCREEPLLLCPESKRRLIVELDDRQRATAARIDQGEPLADNQHYLQY
ECCCCHHCCCHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEEE
RFKGRSIQIGTDAYFFQEGHAEDYVNARYGEFRVAKDGSALLTHLLDADLQRIENK
EECCCEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA