| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797821
Identifier: 108797821
GI number: 108797821
Start: 933722
End: 934924
Strand: Direct
Name: 108797821
Synonym: Mmcs_0846
Alternate gene names: NA
Gene position: 933722-934924 (Clockwise)
Preceding gene: 108797818
Following gene: 108797822
Centisome position: 16.37
GC content: 64.59
Gene sequence:
>1203_bases GTGAACGCGCTGCACAGCGTCAGCGATAGCCGAGTAGATTCCTGCGGCGCTGTCGGCACCGACGGCGATCGTCGAGATGC CAGGGGTGCCACGGAGCCCCAGAACCTGTCCCGAGGTGCCCGAGCCGGCCAGGATCTACCGGTTTCGGACGGCTCGCACC TCTTGCTGACTCGCAAGCCGCCGCTGACACTGCTGGCCACGGTCAGCGCGGCGATCGCTGAGGCGACACCCGACCCGCGG GTTCGCAGGCGGGTTGGCCCGCAAGAGCCGCTTGATCTGAGTGAAGTAGTCGCCCGCCTCAGTGAGCAGCGGTCGCCGGA AATCACGGCAATCCTGGCAACGTTCGCCGAACTGCTGGCAGGGAACGAGCATCTGCAAGCCCGGTGCCGTCAGGAAGTCG CTGCGCGCAACGACCCGATCCCGGAGTGGATTTCCGGTCTTTCGAAGGCAGAGGTCTATCGGGTTGTTCGGGTGGCGCGC GTGCTCGGCGACCACAGCGAGCTGGTGATCGGAGCTCGCCTCGCGGGCGGAAAAGAATTGACCTGCGTGGTGTATCTCGA CCACGACTCGTGGTGCCGGGTGGGCAAGGGGCAATTCGGGGAGAAGTCCATCGACAGCGTGCTTTCCGACTGCAATCCCA CAGCCAACCCCGACCTCAGCGTCGTCGACATGAGCCTCGCCGATGTTCGTGCGTGGATTGAAGACGGGCTGCGGTACGCG ACGATCGTCGTCGACGCCGGCACGTGGCCGGCCTATCGGCCGCTTCTGAACTGGCTGATCGGGCTTATGCCCGAAGGCGG CGCCAGCTACCAGCGGCCCGAATGGGATCCGCACGACATCGATGACCTCCTCAGATCTTTCTTCGTGTCTGCCGAGGGCT TGGTGTTCAACGACTGGCACTACCGCTATCTCCTGCAGGAACTCCTGGAGACCGGCACGGGAGACCCACTCCGCTGGAGC ATGACGCGCATCCGGGAGACGCTCGGTGACCCCATGTTCTTCCACGAGTACATCCCGGTCGAATGCGTCCTCGACGTCCC GGACCTCCTGCGGGCCTTCATCCCCTTCGCCCACGCGAGAAGCGAAATACGTCAGGGACTCACCGCAGAAGCACTTGCCG TGATCGGCGAGATGCGGCTCGGTTACAAACGGACGGTGCTGCGCGAGGCAGGGTGGTGGGATACCGATTACGAAGGGGCG TGA
Upstream 100 bases:
>100_bases CACAACAACTGGACCACTACAGAGGGCTCACCTCACGGCAGCATCCATGCCCAACGACGCGGGTGCATAACAATCACAGT TGCGGCATGAACCGTCCGGT
Downstream 100 bases:
>100_bases GCTCGGCATTCTCAGTGCGCCATCATCGATTTGACGCCCGTGATAGGCCGATCGACCGCGACGGTGACAGCCGTCGCAAT GTGTGTCCCGGTGGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNALHSVSDSRVDSCGAVGTDGDRRDARGATEPQNLSRGARAGQDLPVSDGSHLLLTRKPPLTLLATVSAAIAEATPDPR VRRRVGPQEPLDLSEVVARLSEQRSPEITAILATFAELLAGNEHLQARCRQEVAARNDPIPEWISGLSKAEVYRVVRVAR VLGDHSELVIGARLAGGKELTCVVYLDHDSWCRVGKGQFGEKSIDSVLSDCNPTANPDLSVVDMSLADVRAWIEDGLRYA TIVVDAGTWPAYRPLLNWLIGLMPEGGASYQRPEWDPHDIDDLLRSFFVSAEGLVFNDWHYRYLLQELLETGTGDPLRWS MTRIRETLGDPMFFHEYIPVECVLDVPDLLRAFIPFAHARSEIRQGLTAEALAVIGEMRLGYKRTVLREAGWWDTDYEGA
Sequences:
>Translated_400_residues MNALHSVSDSRVDSCGAVGTDGDRRDARGATEPQNLSRGARAGQDLPVSDGSHLLLTRKPPLTLLATVSAAIAEATPDPR VRRRVGPQEPLDLSEVVARLSEQRSPEITAILATFAELLAGNEHLQARCRQEVAARNDPIPEWISGLSKAEVYRVVRVAR VLGDHSELVIGARLAGGKELTCVVYLDHDSWCRVGKGQFGEKSIDSVLSDCNPTANPDLSVVDMSLADVRAWIEDGLRYA TIVVDAGTWPAYRPLLNWLIGLMPEGGASYQRPEWDPHDIDDLLRSFFVSAEGLVFNDWHYRYLLQELLETGTGDPLRWS MTRIRETLGDPMFFHEYIPVECVLDVPDLLRAFIPFAHARSEIRQGLTAEALAVIGEMRLGYKRTVLREAGWWDTDYEGA >Mature_400_residues MNALHSVSDSRVDSCGAVGTDGDRRDARGATEPQNLSRGARAGQDLPVSDGSHLLLTRKPPLTLLATVSAAIAEATPDPR VRRRVGPQEPLDLSEVVARLSEQRSPEITAILATFAELLAGNEHLQARCRQEVAARNDPIPEWISGLSKAEVYRVVRVAR VLGDHSELVIGARLAGGKELTCVVYLDHDSWCRVGKGQFGEKSIDSVLSDCNPTANPDLSVVDMSLADVRAWIEDGLRYA TIVVDAGTWPAYRPLLNWLIGLMPEGGASYQRPEWDPHDIDDLLRSFFVSAEGLVFNDWHYRYLLQELLETGTGDPLRWS MTRIRETLGDPMFFHEYIPVECVLDVPDLLRAFIPFAHARSEIRQGLTAEALAVIGEMRLGYKRTVLREAGWWDTDYEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44307; Mature: 44307
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALHSVSDSRVDSCGAVGTDGDRRDARGATEPQNLSRGARAGQDLPVSDGSHLLLTRKP CCCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCC PLTLLATVSAAIAEATPDPRVRRRVGPQEPLDLSEVVARLSEQRSPEITAILATFAELLA CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC GNEHLQARCRQEVAARNDPIPEWISGLSKAEVYRVVRVARVLGDHSELVIGARLAGGKEL CCHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE TCVVYLDHDSWCRVGKGQFGEKSIDSVLSDCNPTANPDLSVVDMSLADVRAWIEDGLRYA EEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEE TIVVDAGTWPAYRPLLNWLIGLMPEGGASYQRPEWDPHDIDDLLRSFFVSAEGLVFNDWH EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHH YRYLLQELLETGTGDPLRWSMTRIRETLGDPMFFHEYIPVECVLDVPDLLRAFIPFAHAR HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHH SEIRQGLTAEALAVIGEMRLGYKRTVLREAGWWDTDYEGA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNALHSVSDSRVDSCGAVGTDGDRRDARGATEPQNLSRGARAGQDLPVSDGSHLLLTRKP CCCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCC PLTLLATVSAAIAEATPDPRVRRRVGPQEPLDLSEVVARLSEQRSPEITAILATFAELLA CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC GNEHLQARCRQEVAARNDPIPEWISGLSKAEVYRVVRVARVLGDHSELVIGARLAGGKEL CCHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE TCVVYLDHDSWCRVGKGQFGEKSIDSVLSDCNPTANPDLSVVDMSLADVRAWIEDGLRYA EEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEE TIVVDAGTWPAYRPLLNWLIGLMPEGGASYQRPEWDPHDIDDLLRSFFVSAEGLVFNDWH EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHH YRYLLQELLETGTGDPLRWSMTRIRETLGDPMFFHEYIPVECVLDVPDLLRAFIPFAHAR HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHH SEIRQGLTAEALAVIGEMRLGYKRTVLREAGWWDTDYEGA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA