| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797818
Identifier: 108797818
GI number: 108797818
Start: 930824
End: 932011
Strand: Direct
Name: 108797818
Synonym: Mmcs_0842
Alternate gene names: NA
Gene position: 930824-932011 (Clockwise)
Preceding gene: 108797817
Following gene: 108797821
Centisome position: 16.31
GC content: 55.64
Gene sequence:
>1188_bases TTGCCGAGACACCCTCTCAAACGCAGGGGCCGTCAAGGCACTGATCTCCACCACGGACTTCGGGCACCGGTTCCTGATCC CTGCATCGGTAACGACCGAAGACCACTCAGTGTGCGCAACCGTTTTGCTCGTCCGTCAGCGGCGAGCCGACGTCTTTCCG CTGCCCGCGACATGCATAATTCTGATCGCGTTGTCACCGCCATATCGGCGGATGGACGGCTGATCACCGGGGTTGTGGGG GTGATGAAGGGAATGTTCGAGAACTTTCTCGATTGGGTTCTAGCGGCGCTCGTATTGGTGACGCTTGGTCTGATCGCAGT GAAGGTTATCTCCTACAAGAAGGCTCGGCCGAGACCGCTCAGCTTCATCGACGACGGCCGTGGAGTTGCAGTGGGCGTAG ACGCCCCGTCAGCTTTTGCCGGATTTCGGTTCGCCGAGCTCCATCCCCCGACTTTTCGCTTCGAAATACACGGCAACTTT TCCTGGACGATTTGGTTCACAATGGCTGTTCACGTTCCCGATCGATTCTTTGACTTAACACTCTTACCTCCGGTCATCCT ATGCGTACCACGGGGGTCGACCACGTTCGTGCCAGGAGAGCTCATTGGTTTTAATAGTCGAGGGCAAATGACGGGCCCCG CAGGAGCAAAATACTTCTCCGCAATTGAACGCCGAGCGCCTACACAGAAGAGCTTGGTCTACGCGATAAGGCCGATAGTC ATCTCGACAAACCGTGATGGGTACTCGCCAATGGCTAGATACGAGCTCCGTTGCCATTCCACAGCCCCAAACACGGACTC GGCGGGGCTCCTTTCGACGCATTTCGAGCTGGCCTATCAACCGAGAAACTCGCAACTTGCCGGACTAGTACCTGGTCTTG GACAACTCCAGCCGCCGCCGCAATACGGAGCGTCCGGGATTCCCCTTATCCGTTTGCAATATCAGGCGCGGTCGAACAGA GAGAACCAACGCGATAGCGTCACGCTGCATCCTGATGAATTAGCGCCTGCGCCGGACGCAAGAGATGGCGAAGTCTACAG GTTCACCTTTCGCGCCGATCAGTCTTATTGCGTACAAGGAAAAGCTACTCGCCACTTGATGACATTGGTCAATAGAACTA CTCCATGGTTAATCGGCGCTATGGTCGCGGCCTTTATTGGAGCCGTTATACAAAGATACGTTAACTAG
Upstream 100 bases:
>100_bases CGGCTGCCGCCAGCAACATCAATCTGACCCACATGCGTCCCAAATGTACAAACTCTCGCCAGTCGATGGGCGATCATGTC GCAATCACACGGAGTGATTC
Downstream 100 bases:
>100_bases AACGCGGCCCTACCGGGCGGCGTGCCGCCAGAAATACTATTAAAAGGTCGGTGCAGTCAACCCGCCGATTTCGACGATGG ACTTCGGGTAGCGCGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MPRHPLKRRGRQGTDLHHGLRAPVPDPCIGNDRRPLSVRNRFARPSAASRRLSAARDMHNSDRVVTAISADGRLITGVVG VMKGMFENFLDWVLAALVLVTLGLIAVKVISYKKARPRPLSFIDDGRGVAVGVDAPSAFAGFRFAELHPPTFRFEIHGNF SWTIWFTMAVHVPDRFFDLTLLPPVILCVPRGSTTFVPGELIGFNSRGQMTGPAGAKYFSAIERRAPTQKSLVYAIRPIV ISTNRDGYSPMARYELRCHSTAPNTDSAGLLSTHFELAYQPRNSQLAGLVPGLGQLQPPPQYGASGIPLIRLQYQARSNR ENQRDSVTLHPDELAPAPDARDGEVYRFTFRADQSYCVQGKATRHLMTLVNRTTPWLIGAMVAAFIGAVIQRYVN
Sequences:
>Translated_395_residues MPRHPLKRRGRQGTDLHHGLRAPVPDPCIGNDRRPLSVRNRFARPSAASRRLSAARDMHNSDRVVTAISADGRLITGVVG VMKGMFENFLDWVLAALVLVTLGLIAVKVISYKKARPRPLSFIDDGRGVAVGVDAPSAFAGFRFAELHPPTFRFEIHGNF SWTIWFTMAVHVPDRFFDLTLLPPVILCVPRGSTTFVPGELIGFNSRGQMTGPAGAKYFSAIERRAPTQKSLVYAIRPIV ISTNRDGYSPMARYELRCHSTAPNTDSAGLLSTHFELAYQPRNSQLAGLVPGLGQLQPPPQYGASGIPLIRLQYQARSNR ENQRDSVTLHPDELAPAPDARDGEVYRFTFRADQSYCVQGKATRHLMTLVNRTTPWLIGAMVAAFIGAVIQRYVN >Mature_394_residues PRHPLKRRGRQGTDLHHGLRAPVPDPCIGNDRRPLSVRNRFARPSAASRRLSAARDMHNSDRVVTAISADGRLITGVVGV MKGMFENFLDWVLAALVLVTLGLIAVKVISYKKARPRPLSFIDDGRGVAVGVDAPSAFAGFRFAELHPPTFRFEIHGNFS WTIWFTMAVHVPDRFFDLTLLPPVILCVPRGSTTFVPGELIGFNSRGQMTGPAGAKYFSAIERRAPTQKSLVYAIRPIVI STNRDGYSPMARYELRCHSTAPNTDSAGLLSTHFELAYQPRNSQLAGLVPGLGQLQPPPQYGASGIPLIRLQYQARSNRE NQRDSVTLHPDELAPAPDARDGEVYRFTFRADQSYCVQGKATRHLMTLVNRTTPWLIGAMVAAFIGAVIQRYVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43679; Mature: 43548
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHPLKRRGRQGTDLHHGLRAPVPDPCIGNDRRPLSVRNRFARPSAASRRLSAARDMHN CCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC SDRVVTAISADGRLITGVVGVMKGMFENFLDWVLAALVLVTLGLIAVKVISYKKARPRPL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SFIDDGRGVAVGVDAPSAFAGFRFAELHPPTFRFEIHGNFSWTIWFTMAVHVPDRFFDLT CEEECCCEEEEECCCCCHHHCCEEEECCCCEEEEEEECCEEEEEEEEEEEECCCHHEEEE LLPPVILCVPRGSTTFVPGELIGFNSRGQMTGPAGAKYFSAIERRAPTQKSLVYAIRPIV ECCCEEEEECCCCCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEEEE ISTNRDGYSPMARYELRCHSTAPNTDSAGLLSTHFELAYQPRNSQLAGLVPGLGQLQPPP EECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCC QYGASGIPLIRLQYQARSNRENQRDSVTLHPDELAPAPDARDGEVYRFTFRADQSYCVQG CCCCCCCCEEEEEECHHCCCCCCCCEEEECHHHCCCCCCCCCCCEEEEEEECCCCEEECC KATRHLMTLVNRTTPWLIGAMVAAFIGAVIQRYVN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRHPLKRRGRQGTDLHHGLRAPVPDPCIGNDRRPLSVRNRFARPSAASRRLSAARDMHN CCCCHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCC SDRVVTAISADGRLITGVVGVMKGMFENFLDWVLAALVLVTLGLIAVKVISYKKARPRPL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SFIDDGRGVAVGVDAPSAFAGFRFAELHPPTFRFEIHGNFSWTIWFTMAVHVPDRFFDLT CEEECCCEEEEECCCCCHHHCCEEEECCCCEEEEEEECCEEEEEEEEEEEECCCHHEEEE LLPPVILCVPRGSTTFVPGELIGFNSRGQMTGPAGAKYFSAIERRAPTQKSLVYAIRPIV ECCCEEEEECCCCCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEEEE ISTNRDGYSPMARYELRCHSTAPNTDSAGLLSTHFELAYQPRNSQLAGLVPGLGQLQPPP EECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCC QYGASGIPLIRLQYQARSNRENQRDSVTLHPDELAPAPDARDGEVYRFTFRADQSYCVQG CCCCCCCCEEEEEECHHCCCCCCCCEEEECHHHCCCCCCCCCCCEEEEEEECCCCEEECC KATRHLMTLVNRTTPWLIGAMVAAFIGAVIQRYVN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA