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The map label for this gene is allB [C]

Identifier: 108797589

GI number: 108797589

Start: 672103

End: 673824

Strand: Reverse

Name: allB [C]

Synonym: Mmcs_0609

Alternate gene names: 108797589

Gene position: 673824-672103 (Counterclockwise)

Preceding gene: 108797595

Following gene: 108797585

Centisome position: 11.81

GC content: 69.98

Gene sequence:

>1722_bases
ATGACATTCGAACTCGTCATTCGCAACGGCACCATCGTCGACGGCCTCGGTGGTGAACCGTATGCGGGTGACGTGGCGGT
CAGCGGCGGGGCGATCGCCGCGGTCGGCGCGGTCACCGAACGCGGTGACCGCGAGATCGACGCCACCGGCCTGCTCGTCA
CCCCCGGTTTCGTCGACCTGCACACCCACTACGACGGGCAGGCCATCTGGTCGGACCGGATGACGCCGTCGTCGGCGCAC
GGCGTGACCACGGCGGTGATGGGGAACTGCGGTGTCGGTTTCGCGCCGTGCCGCCCGCAGGACCACGACGTGCTCGTCGA
CGTGATGGCCGGCGTGGAGGACATCCCCGGGGTGGTGATGGTCGACGGGCTGCCGTGGGACTGGGAGACGTTCCCGGAGT
ACCTGGACGCCGTCGACTCGCGGTCCCGGGACATCGACGTGGCGGCGTATCTGCCGCATTCGCCGCTGCGGGTGTACACG
ATGGGTCAGCGGGGCGCCGACCGGGAACCCGCCACCGGCGAGGACCTCGCGCGGATGCGGGCGCTGGCCAAGGAGGCGGT
CGAGGCGGGTGCGCTGGGATTCGCCTCGTCGCGCTTCGCACTGCACAAGACCTCCAGCGGATCGCCGATCCCGACCTACG
ATGCGGCGCAGGCCGAGATCGCCGCGATCGCCGCCGGGGTGGCCGACGGCGGCGGCGGGCTGCTCCAATTCGTCCCCGAC
ATCCCGGCCGGCGGTTACGAGACGGTGTTGCGGCAGGTGTTCGAGGTCGCCGCGGACGTCGGCCTGCCGGTGACGTTCTC
CCTCCTCACCGGCAACACCGGTGATCCGGTGTGGCCGCAGGCGATGAACCTCGTCGAGAAGTTCAACGCCGCCGGCGGTT
CGATCACCGCGCAGATGTTCCCCCGGCCGATCGGCATGGTGATCGGCCTCGAGGTGAGCGGTAACCCGTTCATCATGTAC
CCGAGCTACCAGGAGATCGCCGACCTGCCGCTGGCCGAGCGGGTCGCGGAGATGCGCAAACCCGAAGTGCGCGAACGCAT
CCTGAACGACACACCGTCGGCTCCCGGTCACCCGCTGATGTTCATGGTGCAGGCGTGGAACTGGATCTTCCCGCTCGGCG
AGAACCCCGACTACGAACCGGCGGCCTCGACGTCGATCGCGGCCCGCGCCGCGGCGCGCGGCGTGAGCCCACTGGAGGAG
GCCTACGACCGGCTGCTCGACGAGGACGGGCACGCCATGATGCTGGTGGCCCTGGGCAACTACGAGAACAACTCGCTCGA
CACCGTCGGAGAGCTGATGCACCGCGACGATGTGGTGCTCGGCCTCGGTGACGGCGGTGCCCATTACGGGATGATCTGCG
ACGCAAGCTTTCCCACGTTCATGCTGACGCACTGGACGCGCGACCGGGCCACCGGCCGGCTGTCGGTCGCCGAGGCGGTG
CGTGAGCTGACGTCGGTACCGGCGGGCGTCGCCGGACTGGCCGACCGCGGCCGTATCGCCGTCGGCTACAAGGCCGACCT
CAACGTCATCGACCACGCCGCCCTGCACCTGCACAAACCCGTCGTCGTCCACGATCTGCCCGCCGGCGGTAAACGGCTCG
ACCAGACGGCGGACGGTTATGTCGCCACCGTCGTCAGCGGTGTCGTGATCGCCGAACGCGGGGTTCCGACGGCCGCCCGC
CCCGGCAAGCTGGTGCGCGGACGGCAACCGGCGCCGGCCTAG

Upstream 100 bases:

>100_bases
CAGCACGCCGAGCACCTTGTCGTAGAACTCTTTTGACCTGTCAAGGTCGGCGCAGTTGATTCCGAAGTGATCGATCACCC
GGCCACCGTACATTCGGGGC

Downstream 100 bases:

>100_bases
TGGGTGCCGCGCCACCCGACTGTGCGGTTTCATACGCGACGCGCCGGGGTGGGCGTATCGATCCGCACACTCACCACGTC
TTCGGGCATCGACGCGACTC

Product: amidohydrolase 3

Products: Allantoate; H+ [C]

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTFELVIRNGTIVDGLGGEPYAGDVAVSGGAIAAVGAVTERGDREIDATGLLVTPGFVDLHTHYDGQAIWSDRMTPSSAH
GVTTAVMGNCGVGFAPCRPQDHDVLVDVMAGVEDIPGVVMVDGLPWDWETFPEYLDAVDSRSRDIDVAAYLPHSPLRVYT
MGQRGADREPATGEDLARMRALAKEAVEAGALGFASSRFALHKTSSGSPIPTYDAAQAEIAAIAAGVADGGGGLLQFVPD
IPAGGYETVLRQVFEVAADVGLPVTFSLLTGNTGDPVWPQAMNLVEKFNAAGGSITAQMFPRPIGMVIGLEVSGNPFIMY
PSYQEIADLPLAERVAEMRKPEVRERILNDTPSAPGHPLMFMVQAWNWIFPLGENPDYEPAASTSIAARAAARGVSPLEE
AYDRLLDEDGHAMMLVALGNYENNSLDTVGELMHRDDVVLGLGDGGAHYGMICDASFPTFMLTHWTRDRATGRLSVAEAV
RELTSVPAGVAGLADRGRIAVGYKADLNVIDHAALHLHKPVVVHDLPAGGKRLDQTADGYVATVVSGVVIAERGVPTAAR
PGKLVRGRQPAPA

Sequences:

>Translated_573_residues
MTFELVIRNGTIVDGLGGEPYAGDVAVSGGAIAAVGAVTERGDREIDATGLLVTPGFVDLHTHYDGQAIWSDRMTPSSAH
GVTTAVMGNCGVGFAPCRPQDHDVLVDVMAGVEDIPGVVMVDGLPWDWETFPEYLDAVDSRSRDIDVAAYLPHSPLRVYT
MGQRGADREPATGEDLARMRALAKEAVEAGALGFASSRFALHKTSSGSPIPTYDAAQAEIAAIAAGVADGGGGLLQFVPD
IPAGGYETVLRQVFEVAADVGLPVTFSLLTGNTGDPVWPQAMNLVEKFNAAGGSITAQMFPRPIGMVIGLEVSGNPFIMY
PSYQEIADLPLAERVAEMRKPEVRERILNDTPSAPGHPLMFMVQAWNWIFPLGENPDYEPAASTSIAARAAARGVSPLEE
AYDRLLDEDGHAMMLVALGNYENNSLDTVGELMHRDDVVLGLGDGGAHYGMICDASFPTFMLTHWTRDRATGRLSVAEAV
RELTSVPAGVAGLADRGRIAVGYKADLNVIDHAALHLHKPVVVHDLPAGGKRLDQTADGYVATVVSGVVIAERGVPTAAR
PGKLVRGRQPAPA
>Mature_572_residues
TFELVIRNGTIVDGLGGEPYAGDVAVSGGAIAAVGAVTERGDREIDATGLLVTPGFVDLHTHYDGQAIWSDRMTPSSAHG
VTTAVMGNCGVGFAPCRPQDHDVLVDVMAGVEDIPGVVMVDGLPWDWETFPEYLDAVDSRSRDIDVAAYLPHSPLRVYTM
GQRGADREPATGEDLARMRALAKEAVEAGALGFASSRFALHKTSSGSPIPTYDAAQAEIAAIAAGVADGGGGLLQFVPDI
PAGGYETVLRQVFEVAADVGLPVTFSLLTGNTGDPVWPQAMNLVEKFNAAGGSITAQMFPRPIGMVIGLEVSGNPFIMYP
SYQEIADLPLAERVAEMRKPEVRERILNDTPSAPGHPLMFMVQAWNWIFPLGENPDYEPAASTSIAARAAARGVSPLEEA
YDRLLDEDGHAMMLVALGNYENNSLDTVGELMHRDDVVLGLGDGGAHYGMICDASFPTFMLTHWTRDRATGRLSVAEAVR
ELTSVPAGVAGLADRGRIAVGYKADLNVIDHAALHLHKPVVVHDLPAGGKRLDQTADGYVATVVSGVVIAERGVPTAARP
GKLVRGRQPAPA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

Organism=Escherichia coli, GI1786722, Length=91, Percent_Identity=40.6593406593407, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: 3.5.2.5 [C]

Molecular weight: Translated: 60558; Mature: 60427

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFELVIRNGTIVDGLGGEPYAGDVAVSGGAIAAVGAVTERGDREIDATGLLVTPGFVDL
CEEEEEEECCEEEECCCCCCCCCCEEECCCCEEEEHHHHCCCCCCCCCCEEEECCCEEEE
HTHYDGQAIWSDRMTPSSAHGVTTAVMGNCGVGFAPCRPQDHDVLVDVMAGVEDIPGVVM
EECCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHCCCEEE
VDGLPWDWETFPEYLDAVDSRSRDIDVAAYLPHSPLRVYTMGQRGADREPATGEDLARMR
ECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHH
ALAKEAVEAGALGFASSRFALHKTSSGSPIPTYDAAQAEIAAIAAGVADGGGGLLQFVPD
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCC
IPAGGYETVLRQVFEVAADVGLPVTFSLLTGNTGDPVWPQAMNLVEKFNAAGGSITAQMF
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECC
PRPIGMVIGLEVSGNPFIMYPSYQEIADLPLAERVAEMRKPEVRERILNDTPSAPGHPLM
CCCCCEEEEEEECCCEEEECCCHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCEE
FMVQAWNWIFPLGENPDYEPAASTSIAARAAARGVSPLEEAYDRLLDEDGHAMMLVALGN
EEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECC
YENNSLDTVGELMHRDDVVLGLGDGGAHYGMICDASFPTFMLTHWTRDRATGRLSVAEAV
CCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCEEEEEECHHCCCCCCHHHHHHH
RELTSVPAGVAGLADRGRIAVGYKADLNVIDHAALHLHKPVVVHDLPAGGKRLDQTADGY
HHHHHCCCCHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCH
VATVVSGVVIAERGVPTAARPGKLVRGRQPAPA
HHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFELVIRNGTIVDGLGGEPYAGDVAVSGGAIAAVGAVTERGDREIDATGLLVTPGFVDL
EEEEEEECCEEEECCCCCCCCCCEEECCCCEEEEHHHHCCCCCCCCCCEEEECCCEEEE
HTHYDGQAIWSDRMTPSSAHGVTTAVMGNCGVGFAPCRPQDHDVLVDVMAGVEDIPGVVM
EECCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHCCCEEE
VDGLPWDWETFPEYLDAVDSRSRDIDVAAYLPHSPLRVYTMGQRGADREPATGEDLARMR
ECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHH
ALAKEAVEAGALGFASSRFALHKTSSGSPIPTYDAAQAEIAAIAAGVADGGGGLLQFVPD
HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCC
IPAGGYETVLRQVFEVAADVGLPVTFSLLTGNTGDPVWPQAMNLVEKFNAAGGSITAQMF
CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECC
PRPIGMVIGLEVSGNPFIMYPSYQEIADLPLAERVAEMRKPEVRERILNDTPSAPGHPLM
CCCCCEEEEEEECCCEEEECCCHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCEE
FMVQAWNWIFPLGENPDYEPAASTSIAARAAARGVSPLEEAYDRLLDEDGHAMMLVALGN
EEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECC
YENNSLDTVGELMHRDDVVLGLGDGGAHYGMICDASFPTFMLTHWTRDRATGRLSVAEAV
CCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCEEEEEECHHCCCCCCHHHHHHH
RELTSVPAGVAGLADRGRIAVGYKADLNVIDHAALHLHKPVVVHDLPAGGKRLDQTADGY
HHHHHCCCCHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCH
VATVVSGVVIAERGVPTAARPGKLVRGRQPAPA
HHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Allantoin; H2O [C]

Specific reaction: Allantoin + H2O --> Allantoate + H+ [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: Dithiothreitol; p-Chloromercuribenzene-sulphonic acid [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]