| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797461
Identifier: 108797461
GI number: 108797461
Start: 536000
End: 536896
Strand: Direct
Name: 108797461
Synonym: Mmcs_0481
Alternate gene names: NA
Gene position: 536000-536896 (Clockwise)
Preceding gene: 108797460
Following gene: 108797462
Centisome position: 9.39
GC content: 69.68
Gene sequence:
>897_bases GTGCGCGCGCTCGTCGCCGTCGTCGTGACGGTTCTGCTCGTTGCGGTCACCGGCTGCTCGAAGGCCGAGGGCCGGTCCGA CACCTACTCCGCGCCGACGGCGAAAGTCGGTGAGTCCCTGGCAGTCTCGGGATGGAACATCTCGGTGTCGAATCTGCGCT TCGAGGCCGATCACGTCCTCGTCGACGTCGACGCCTCGCATTCGGGCGAGGGCGAATCGGTCGCGCCGGAGTCGCTGCGG TTCGGCCTCTACGGCGCGCTGGTGCACCCGATCGAGGCGAACGGGCTCGGCAGCTGCCAGAACGTCGACGCGCTCAACGT CAACCCGATGTCCGCGCCGAGCCCCGACCGGCTCAGCGGCACAGTGTGTCTGGGTCCGCAGCGTGACCAGAGCCAGGTGC GTGGCATCTACGCGTACTCACCGCAGGACCGGATGGCCGGGACCACGGTCGCCTACGCCGCGGCGTTCCCCGTCGGCCTG CTGCCCACCCGTGACACCGAAACCGGCCTCACGCTCACGACGACCAGCCTCGATGCGTTCCGCGCCGACGGCGCACAGCT GAACCAGGCCGCGCTGGGTGACCCGGAAGCCTTCAGCGGCAACGGTTACATGCTGCTCGGCCTCCAGATCGACGGGCTGG CGAGCCGATACCGCGAGGACTCGATGCGCCGGGGTGGCCCGCTGATGGTCGTCGTGGCGCCGACGTTGCCGGGTAAGGGA CTGAGCTACGCGTGTGCGGCGTACGGGGCATCGGTGCTGGTGCTCCCGGAGGCGTCCCGCGAGGCGGTGAACATGCGCGC CTCCCTGTGTACGCAGGGTGAGATCAACCGCGCGCTGCTGTTCGCCTCGGTGTCGGTGGTCGGGACCCACGCCGCACTGT GGACCACCGGTGACTGA
Upstream 100 bases:
>100_bases GTACAAGGCCATGACCACCGTCAGCCGCCTGGTCCCGCGCCACCTCGTGCGCGCCATGACGAGGACCGTGGGCCGCGGCC GCGGCCGCACCTGATCGCCG
Downstream 100 bases:
>100_bases GGCGCCGGGTCCCACCGAATGGGGTGAGGCCCCCGGCGTGGGACCGTGGCCGGGGGACTTGCCCGACGATCCGCGGTACG ACCCGGAACTGTTGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRALVAVVVTVLLVAVTGCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVLVDVDASHSGEGESVAPESLR FGLYGALVHPIEANGLGSCQNVDALNVNPMSAPSPDRLSGTVCLGPQRDQSQVRGIYAYSPQDRMAGTTVAYAAAFPVGL LPTRDTETGLTLTTTSLDAFRADGAQLNQAALGDPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKG LSYACAAYGASVLVLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTTGD
Sequences:
>Translated_298_residues MRALVAVVVTVLLVAVTGCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVLVDVDASHSGEGESVAPESLR FGLYGALVHPIEANGLGSCQNVDALNVNPMSAPSPDRLSGTVCLGPQRDQSQVRGIYAYSPQDRMAGTTVAYAAAFPVGL LPTRDTETGLTLTTTSLDAFRADGAQLNQAALGDPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKG LSYACAAYGASVLVLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTTGD >Mature_298_residues MRALVAVVVTVLLVAVTGCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVLVDVDASHSGEGESVAPESLR FGLYGALVHPIEANGLGSCQNVDALNVNPMSAPSPDRLSGTVCLGPQRDQSQVRGIYAYSPQDRMAGTTVAYAAAFPVGL LPTRDTETGLTLTTTSLDAFRADGAQLNQAALGDPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKG LSYACAAYGASVLVLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTTGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30950; Mature: 30950
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVAVVVTVLLVAVTGCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCEEECCCEEEEEEEEEECCEEE VDVDASHSGEGESVAPESLRFGLYGALVHPIEANGLGSCQNVDALNVNPMSAPSPDRLSG EEECCCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCE TVCLGPQRDQSQVRGIYAYSPQDRMAGTTVAYAAAFPVGLLPTRDTETGLTLTTTSLDAF EEEECCCCCHHHCCEEEEECCCCCCCCCCEEHHHHCCCCCCCCCCCCCCEEEEEECCHHH RADGAQLNQAALGDPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKG HCCCCCCCHHHCCCCCEECCCCEEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCC LSYACAAYGASVLVLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTTGD CCHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECEEEEEECCC >Mature Secondary Structure MRALVAVVVTVLLVAVTGCSKAEGRSDTYSAPTAKVGESLAVSGWNISVSNLRFEADHVL CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCEEECCCEEEEEEEEEECCEEE VDVDASHSGEGESVAPESLRFGLYGALVHPIEANGLGSCQNVDALNVNPMSAPSPDRLSG EEECCCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCE TVCLGPQRDQSQVRGIYAYSPQDRMAGTTVAYAAAFPVGLLPTRDTETGLTLTTTSLDAF EEEECCCCCHHHCCEEEEECCCCCCCCCCEEHHHHCCCCCCCCCCCCCCEEEEEECCHHH RADGAQLNQAALGDPEAFSGNGYMLLGLQIDGLASRYREDSMRRGGPLMVVVAPTLPGKG HCCCCCCCHHHCCCCCEECCCCEEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCC LSYACAAYGASVLVLPEASREAVNMRASLCTQGEINRALLFASVSVVGTHAALWTTGD CCHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA