Click here to switch to the map view.

The map label for this gene is yagS [H]

Identifier: 108797418

GI number: 108797418

Start: 486091

End: 487083

Strand: Reverse

Name: yagS [H]

Synonym: Mmcs_0438

Alternate gene names: 108797418

Gene position: 487083-486091 (Counterclockwise)

Preceding gene: 108797419

Following gene: 108797417

Centisome position: 8.54

GC content: 69.99

Gene sequence:

>993_bases
GTGAGGGCGTTCGACTACCACCTGGCTGAGAGCCCGGCCGATGCGGTGGCAACACTGACCGCGCATCCCGACGCCGCCTA
TCTCGCCGGCGGCACCAACCTCGTCGACCACATGAAGCTCGGGGTCGCCACCCCCGACCTGCTGGTCGACGTGAGCCGCC
TGCCCCTCGACGAGGTGACGGCCACCGACGACGGGGGTGTGCGCATCGGCGCCACCGTTCGCAACAGCGACCTCGCCGCC
CATCCGGTGATCCGGTCACGTTATCCCGTCCTGTCGCGGGCGATGCTGTCCGCGGCGTCGGGTCAGCTGCGCAACTCCGC
CACGACGGCGGGAAATCTGTTGCAGCGCACCCGTTGTGTGTACTTCCAGGACGTCACCACACCGTGCAACAAGCGCAGCC
CGGGAAGCGGGTGCTCGGCGATCGGCGGCTACGTGCGCTACCACGCGATTCTCGGCGCGTCTGAACACTGCATCGCCGTG
CATCCGTCCGATATGGCGGTCGCGATGAGCGCGCTGGACGGTGTGGTGGTCGTCGAGGGCTCCGACGGCGAGCGCCGCAT
TCCGATCGACGAGTTCTACCGGCTGCCCGTCGACGAACCTCACCGCGACACCGTGCTGCGCCACGGCGAGCTGATCACCG
CGGTGGAACTGCCCGCACCGCCTCCCGGGGCGGTGTCCGAATACCGCAAGGTCCGCGACCGGGCGTCGTTCGCGTTCGCG
CTGGTATCGGTCGCTGCCGAGCTCAGCCTCTCCGACGACCGGATCGGTTCGGCGCGAATCGCTTTCGGCGGTGTCGCGCA
CAAGCCGTGGCGGGCCCGCCGCGCCGAGGAGGTGCTGACCGGTGCACCACCCACCGACAACACGTTCGCAGCGGCCGCCG
ACGCCGAGTTGTCGGCCGCGGACCCGCAACCGGGCAACGAGTTCAAGGTTGCGCTGGCCCGCCGCACGCTGATCGCCGAA
CTGCGCGCGCTGACCGGACGGGGACGGCCATGA

Upstream 100 bases:

>100_bases
GAGATCCGGGAACGGATGAGCGGCAACCTGTGCCGCTGCGCGGCGTACCCGAACATCGTCGCCGCGATCGAACGGGCTTC
AGTTCAGTGAGGCGGGTTCA

Downstream 100 bases:

>100_bases
CACTCCTCGACCCGCAGGCGATCGGCGCCCCGATGGCACGGCTGGACGGCCGCGCCAAGGTCACCGGCGCCGCGCCGTAC
GCCTTCGAACAGCGCGTCGA

Product: molybdopterin dehydrogenase, FAD-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRAFDYHLAESPADAVATLTAHPDAAYLAGGTNLVDHMKLGVATPDLLVDVSRLPLDEVTATDDGGVRIGATVRNSDLAA
HPVIRSRYPVLSRAMLSAASGQLRNSATTAGNLLQRTRCVYFQDVTTPCNKRSPGSGCSAIGGYVRYHAILGASEHCIAV
HPSDMAVAMSALDGVVVVEGSDGERRIPIDEFYRLPVDEPHRDTVLRHGELITAVELPAPPPGAVSEYRKVRDRASFAFA
LVSVAAELSLSDDRIGSARIAFGGVAHKPWRARRAEEVLTGAPPTDNTFAAAADAELSAADPQPGNEFKVALARRTLIAE
LRALTGRGRP

Sequences:

>Translated_330_residues
MRAFDYHLAESPADAVATLTAHPDAAYLAGGTNLVDHMKLGVATPDLLVDVSRLPLDEVTATDDGGVRIGATVRNSDLAA
HPVIRSRYPVLSRAMLSAASGQLRNSATTAGNLLQRTRCVYFQDVTTPCNKRSPGSGCSAIGGYVRYHAILGASEHCIAV
HPSDMAVAMSALDGVVVVEGSDGERRIPIDEFYRLPVDEPHRDTVLRHGELITAVELPAPPPGAVSEYRKVRDRASFAFA
LVSVAAELSLSDDRIGSARIAFGGVAHKPWRARRAEEVLTGAPPTDNTFAAAADAELSAADPQPGNEFKVALARRTLIAE
LRALTGRGRP
>Mature_330_residues
MRAFDYHLAESPADAVATLTAHPDAAYLAGGTNLVDHMKLGVATPDLLVDVSRLPLDEVTATDDGGVRIGATVRNSDLAA
HPVIRSRYPVLSRAMLSAASGQLRNSATTAGNLLQRTRCVYFQDVTTPCNKRSPGSGCSAIGGYVRYHAILGASEHCIAV
HPSDMAVAMSALDGVVVVEGSDGERRIPIDEFYRLPVDEPHRDTVLRHGELITAVELPAPPPGAVSEYRKVRDRASFAFA
LVSVAAELSLSDDRIGSARIAFGGVAHKPWRARRAEEVLTGAPPTDNTFAAAADAELSAADPQPGNEFKVALARRTLIAE
LRALTGRGRP

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=327, Percent_Identity=54.434250764526, Blast_Score=319, Evalue=2e-88,
Organism=Escherichia coli, GI1789231, Length=330, Percent_Identity=26.0606060606061, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 35017; Mature: 35017

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFDYHLAESPADAVATLTAHPDAAYLAGGTNLVDHMKLGVATPDLLVDVSRLPLDEVT
CCCCCCCCCCCCCHHEEEEECCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHCCHHHCC
ATDDGGVRIGATVRNSDLAAHPVIRSRYPVLSRAMLSAASGQLRNSATTAGNLLQRTRCV
CCCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHEE
YFQDVTTPCNKRSPGSGCSAIGGYVRYHAILGASEHCIAVHPSDMAVAMSALDGVVVVEG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCEEEEEC
SDGERRIPIDEFYRLPVDEPHRDTVLRHGELITAVELPAPPPGAVSEYRKVRDRASFAFA
CCCCCCCCHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
LVSVAAELSLSDDRIGSARIAFGGVAHKPWRARRAEEVLTGAPPTDNTFAAAADAELSAA
HHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
DPQPGNEFKVALARRTLIAELRALTGRGRP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRAFDYHLAESPADAVATLTAHPDAAYLAGGTNLVDHMKLGVATPDLLVDVSRLPLDEVT
CCCCCCCCCCCCCHHEEEEECCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHCCHHHCC
ATDDGGVRIGATVRNSDLAAHPVIRSRYPVLSRAMLSAASGQLRNSATTAGNLLQRTRCV
CCCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHEE
YFQDVTTPCNKRSPGSGCSAIGGYVRYHAILGASEHCIAVHPSDMAVAMSALDGVVVVEG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCEEEEEC
SDGERRIPIDEFYRLPVDEPHRDTVLRHGELITAVELPAPPPGAVSEYRKVRDRASFAFA
CCCCCCCCHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
LVSVAAELSLSDDRIGSARIAFGGVAHKPWRARRAEEVLTGAPPTDNTFAAAADAELSAA
HHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
DPQPGNEFKVALARRTLIAELRALTGRGRP
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]