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The map label for this gene is yagR [H]

Identifier: 108797417

GI number: 108797417

Start: 484004

End: 486094

Strand: Reverse

Name: yagR [H]

Synonym: Mmcs_0437

Alternate gene names: 108797417

Gene position: 486094-484004 (Counterclockwise)

Preceding gene: 108797418

Following gene: 108797406

Centisome position: 8.52

GC content: 69.63

Gene sequence:

>2091_bases
ATGACACTCCTCGACCCGCAGGCGATCGGCGCCCCGATGGCACGGCTGGACGGCCGCGCCAAGGTCACCGGCGCCGCGCC
GTACGCCTTCGAACAGCGCGTCGACGATCCGGCGTATCTGCATCCGATCCAGTCGACGATCGCCCGTGGTCGGGTCGCGG
CCGTCGACACCGACGCCGCCAGGGCGATCGACGGTGTGCTCGATGTGCTGACGGTGTTCGACGCCCCGGAACTCGCCGAC
ACCTCCGATGGTGAGCTGTCGATCCTGCAGGACGACCGCGTGCACTTCCGCGGTCAGATCATCGGCGGGGTCGTCGCGGA
GACGGCCGAGATCGCCCGGCACGCAGCAGGTCTCGTGCAGGTGAGGTACACCGAGGAATCGCACGACGTGGAGCTGACCG
CCGACCACCCCGGGCTCTACACCCCTGAGCAGGTCAACGCGGGGTATCCGTCGGACACCGACGAGGGTGACGTGGAGGCG
GCGCTGGCCTCGGCCGAGGTCACCGTCGACCAGACCTATTCGACACCGATCGAGCACAACAACCCGATGGAGCCACACGC
CGCGATCGCGATATGGACCGCTGACGGGGTGACGATGTTCGACTCCACACAGGGTGTGCACGCCGCGCGGAAGGCACTGG
CACCGCTCTTCGGACTCGAACCCGACCAGTTGCGGGTCATCGCACCGCATGTCGGCGGCGGCTTCGGCTCGAAGGGGGCC
CCGCACGCGCACGACGTCCTGGCCCTGCTGGCCGCCCAGCGCAGCGGTGGGCGGCCGGTGAAGCTGGCGCTGACCCGTCA
GCAGATGTTCGCCCTGGTGGGCTATCGGACACCGACCATCCAGCGCATCCGGCTCGGCGCGAACCAGGACGGCACCCTGA
CCGCACTGGCGCACGAGGTCGTCGAACAGACCTCGGCCGTCAAGGAATACGCCGAACAGACGGCGGTGACGTCACGCAAG
ATGTACGCCGCACCGAACCGGCGCACCGCCCACCGACTCGCCGCCCTCGACGTGCCGGTACCGTTCTGGTTCCGCGCCCC
GGGTGAGTGTCCCGGCGCCTACGCCGCCGAGGTGGCGATGGACGAACTGGCGGCGGCCTGCGGGGTCGACCCGATCGAAC
TGCGGGTGCGCAACGATCCCGAGGTCGACCCCGAGACCGGCAACCCGTGGTCGGGCCGCCACCTCGTGGAATGCCTGCGG
CTGGGGGCCGAGCGGTTCGGCTGGTCGTCGCGTGATCCTGTTCCCGCACAACGTTTTTCCGGTGACTGGTACGTCGGGCT
CGGTGTCGCGTCGGCGACCTATCCGGCCATGCAGATGCCGGGTAACTCCGCGCGGATCACCTACGCCGACGAGGGCCGCT
ACCTGGTGCAGATCGGCGCCGCCGACATCGGCACCGGCACCTGGACGACGCTGACGCAGATCGCCGCCGACGCGTTGGGT
TGCGATGTGGCCGCGGTCGACCTGCAGATCGGCGACAGCGCGCTGCCGGAGGCATCGGTGGCCGGCGGATCGTCGGGCAT
CAACTCGTGGGGACGGGCGATCGTCACGGCCGCACGGCAGTTCCGTCGCGACCACGGCGATCCCCCGGCGATCGGCGCGA
CCACGGTGGCCGAGGCACCCGAGAACCCCGAGTCCGAGAAGTTCACCATGCAGTCCTTCGGCGCCCACTTCGTCGAGGCG
AGGGTCAACCGGGACACCGGGGAGATCCGCGTGCCGCGGATGTTGGGCGTCTTCTCCATCGGCCGGGCGATCAACGCCCG
TACGCTGCGCTCGCAGCTCATCGGCGGAATGACGATGGGCCTGTCGATGGCGTTGCACGAGGAGAGCGTGCGCGATCCGC
GGTTCGGCCACGTCGTCACACAGGATTTCGCGACCTACCACATCAGCGCGCACGCCGACGTGGCCGACATCGACGCGATC
TGGCTCGACGAGGCCGACGAACACGCCAACCCGATGGGATCGCGCGGCGCCGGGGAGATCGGCATCGTCGGATCGGCCGC
CGCGGTGGTCAACGCCGTCTACAACGCGACCGGTGTGCGCGTGCGCGATCTGCCGGTCACCCTCGACAAGGTGCTGTCCG
GGCTGCCCTGA

Upstream 100 bases:

>100_bases
TGTCGGCCGCGGACCCGCAACCGGGCAACGAGTTCAAGGTTGCGCTGGCCCGCCGCACGCTGATCGCCGAACTGCGCGCG
CTGACCGGACGGGGACGGCC

Downstream 100 bases:

>100_bases
TCAGCGGTCGAGCAACTCCAGCAGATAGGCGCCGTACCCGGATTTGAGCAGGCTGTGCCCGCGGGCGGCCAACTGCTCGT
CGTCGATGAACCCGACGCGC

Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 696; Mature: 695

Protein sequence:

>696_residues
MTLLDPQAIGAPMARLDGRAKVTGAAPYAFEQRVDDPAYLHPIQSTIARGRVAAVDTDAARAIDGVLDVLTVFDAPELAD
TSDGELSILQDDRVHFRGQIIGGVVAETAEIARHAAGLVQVRYTEESHDVELTADHPGLYTPEQVNAGYPSDTDEGDVEA
ALASAEVTVDQTYSTPIEHNNPMEPHAAIAIWTADGVTMFDSTQGVHAARKALAPLFGLEPDQLRVIAPHVGGGFGSKGA
PHAHDVLALLAAQRSGGRPVKLALTRQQMFALVGYRTPTIQRIRLGANQDGTLTALAHEVVEQTSAVKEYAEQTAVTSRK
MYAAPNRRTAHRLAALDVPVPFWFRAPGECPGAYAAEVAMDELAAACGVDPIELRVRNDPEVDPETGNPWSGRHLVECLR
LGAERFGWSSRDPVPAQRFSGDWYVGLGVASATYPAMQMPGNSARITYADEGRYLVQIGAADIGTGTWTTLTQIAADALG
CDVAAVDLQIGDSALPEASVAGGSSGINSWGRAIVTAARQFRRDHGDPPAIGATTVAEAPENPESEKFTMQSFGAHFVEA
RVNRDTGEIRVPRMLGVFSIGRAINARTLRSQLIGGMTMGLSMALHEESVRDPRFGHVVTQDFATYHISAHADVADIDAI
WLDEADEHANPMGSRGAGEIGIVGSAAAVVNAVYNATGVRVRDLPVTLDKVLSGLP

Sequences:

>Translated_696_residues
MTLLDPQAIGAPMARLDGRAKVTGAAPYAFEQRVDDPAYLHPIQSTIARGRVAAVDTDAARAIDGVLDVLTVFDAPELAD
TSDGELSILQDDRVHFRGQIIGGVVAETAEIARHAAGLVQVRYTEESHDVELTADHPGLYTPEQVNAGYPSDTDEGDVEA
ALASAEVTVDQTYSTPIEHNNPMEPHAAIAIWTADGVTMFDSTQGVHAARKALAPLFGLEPDQLRVIAPHVGGGFGSKGA
PHAHDVLALLAAQRSGGRPVKLALTRQQMFALVGYRTPTIQRIRLGANQDGTLTALAHEVVEQTSAVKEYAEQTAVTSRK
MYAAPNRRTAHRLAALDVPVPFWFRAPGECPGAYAAEVAMDELAAACGVDPIELRVRNDPEVDPETGNPWSGRHLVECLR
LGAERFGWSSRDPVPAQRFSGDWYVGLGVASATYPAMQMPGNSARITYADEGRYLVQIGAADIGTGTWTTLTQIAADALG
CDVAAVDLQIGDSALPEASVAGGSSGINSWGRAIVTAARQFRRDHGDPPAIGATTVAEAPENPESEKFTMQSFGAHFVEA
RVNRDTGEIRVPRMLGVFSIGRAINARTLRSQLIGGMTMGLSMALHEESVRDPRFGHVVTQDFATYHISAHADVADIDAI
WLDEADEHANPMGSRGAGEIGIVGSAAAVVNAVYNATGVRVRDLPVTLDKVLSGLP
>Mature_695_residues
TLLDPQAIGAPMARLDGRAKVTGAAPYAFEQRVDDPAYLHPIQSTIARGRVAAVDTDAARAIDGVLDVLTVFDAPELADT
SDGELSILQDDRVHFRGQIIGGVVAETAEIARHAAGLVQVRYTEESHDVELTADHPGLYTPEQVNAGYPSDTDEGDVEAA
LASAEVTVDQTYSTPIEHNNPMEPHAAIAIWTADGVTMFDSTQGVHAARKALAPLFGLEPDQLRVIAPHVGGGFGSKGAP
HAHDVLALLAAQRSGGRPVKLALTRQQMFALVGYRTPTIQRIRLGANQDGTLTALAHEVVEQTSAVKEYAEQTAVTSRKM
YAAPNRRTAHRLAALDVPVPFWFRAPGECPGAYAAEVAMDELAAACGVDPIELRVRNDPEVDPETGNPWSGRHLVECLRL
GAERFGWSSRDPVPAQRFSGDWYVGLGVASATYPAMQMPGNSARITYADEGRYLVQIGAADIGTGTWTTLTQIAADALGC
DVAAVDLQIGDSALPEASVAGGSSGINSWGRAIVTAARQFRRDHGDPPAIGATTVAEAPENPESEKFTMQSFGAHFVEAR
VNRDTGEIRVPRMLGVFSIGRAINARTLRSQLIGGMTMGLSMALHEESVRDPRFGHVVTQDFATYHISAHADVADIDAIW
LDEADEHANPMGSRGAGEIGIVGSAAAVVNAVYNATGVRVRDLPVTLDKVLSGLP

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=747, Percent_Identity=23.6947791164659, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI71773480, Length=746, Percent_Identity=23.3243967828418, Blast_Score=125, Evalue=1e-28,
Organism=Escherichia coli, GI1786478, Length=722, Percent_Identity=38.781163434903, Blast_Score=439, Evalue=1e-124,
Organism=Escherichia coli, GI1789230, Length=755, Percent_Identity=27.5496688741722, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1789246, Length=802, Percent_Identity=25.6857855361596, Blast_Score=183, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17540638, Length=659, Percent_Identity=23.5204855842185, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI17737937, Length=686, Percent_Identity=24.4897959183673, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24647199, Length=685, Percent_Identity=21.8978102189781, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24647195, Length=709, Percent_Identity=21.8617771509168, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24647201, Length=649, Percent_Identity=21.1093990755008, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24647197, Length=664, Percent_Identity=21.8373493975904, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24647193, Length=669, Percent_Identity=21.3751868460389, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 73961; Mature: 73829

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLDPQAIGAPMARLDGRAKVTGAAPYAFEQRVDDPAYLHPIQSTIARGRVAAVDTDAA
CCCCCCHHHCCCHHHCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHH
RAIDGVLDVLTVFDAPELADTSDGELSILQDDRVHFRGQIIGGVVAETAEIARHAAGLVQ
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCEEE
VRYTEESHDVELTADHPGLYTPEQVNAGYPSDTDEGDVEAALASAEVTVDQTYSTPIEHN
EEEECCCCCEEEEECCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCCCCCC
NPMEPHAAIAIWTADGVTMFDSTQGVHAARKALAPLFGLEPDQLRVIAPHVGGGFGSKGA
CCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
PHAHDVLALLAAQRSGGRPVKLALTRQQMFALVGYRTPTIQRIRLGANQDGTLTALAHEV
CHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
VEQTSAVKEYAEQTAVTSRKMYAAPNRRTAHRLAALDVPVPFWFRAPGECPGAYAAEVAM
HHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHEEECCCCCCEECCCCCCCCHHHHHHHH
DELAAACGVDPIELRVRNDPEVDPETGNPWSGRHLVECLRLGAERFGWSSRDPVPAQRFS
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
GDWYVGLGVASATYPAMQMPGNSARITYADEGRYLVQIGAADIGTGTWTTLTQIAADALG
CCEEEEEEECCCCCCHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHC
CDVAAVDLQIGDSALPEASVAGGSSGINSWGRAIVTAARQFRRDHGDPPAIGATTVAEAP
CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
ENPESEKFTMQSFGAHFVEARVNRDTGEIRVPRMLGVFSIGRAINARTLRSQLIGGMTMG
CCCCCCCEEHHHHCCEEEEHEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LSMALHEESVRDPRFGHVVTQDFATYHISAHADVADIDAIWLDEADEHANPMGSRGAGEI
HHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCHHCCEEECCCCHHHCCCCCCCCCCCE
GIVGSAAAVVNAVYNATGVRVRDLPVTLDKVLSGLP
EEECHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCC
>Mature Secondary Structure 
TLLDPQAIGAPMARLDGRAKVTGAAPYAFEQRVDDPAYLHPIQSTIARGRVAAVDTDAA
CCCCCHHHCCCHHHCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHH
RAIDGVLDVLTVFDAPELADTSDGELSILQDDRVHFRGQIIGGVVAETAEIARHAAGLVQ
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCEEE
VRYTEESHDVELTADHPGLYTPEQVNAGYPSDTDEGDVEAALASAEVTVDQTYSTPIEHN
EEEECCCCCEEEEECCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCCCCCC
NPMEPHAAIAIWTADGVTMFDSTQGVHAARKALAPLFGLEPDQLRVIAPHVGGGFGSKGA
CCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
PHAHDVLALLAAQRSGGRPVKLALTRQQMFALVGYRTPTIQRIRLGANQDGTLTALAHEV
CHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
VEQTSAVKEYAEQTAVTSRKMYAAPNRRTAHRLAALDVPVPFWFRAPGECPGAYAAEVAM
HHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHEEECCCCCCEECCCCCCCCHHHHHHHH
DELAAACGVDPIELRVRNDPEVDPETGNPWSGRHLVECLRLGAERFGWSSRDPVPAQRFS
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
GDWYVGLGVASATYPAMQMPGNSARITYADEGRYLVQIGAADIGTGTWTTLTQIAADALG
CCEEEEEEECCCCCCHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHC
CDVAAVDLQIGDSALPEASVAGGSSGINSWGRAIVTAARQFRRDHGDPPAIGATTVAEAP
CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
ENPESEKFTMQSFGAHFVEARVNRDTGEIRVPRMLGVFSIGRAINARTLRSQLIGGMTMG
CCCCCCCEEHHHHCCEEEEHEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LSMALHEESVRDPRFGHVVTQDFATYHISAHADVADIDAIWLDEADEHANPMGSRGAGEI
HHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCHHCCEEECCCCHHHCCCCCCCCCCCE
GIVGSAAAVVNAVYNATGVRVRDLPVTLDKVLSGLP
EEECHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]