Click here to switch to the map view.

The map label for this gene is yagT [H]

Identifier: 108797419

GI number: 108797419

Start: 487094

End: 487615

Strand: Reverse

Name: yagT [H]

Synonym: Mmcs_0439

Alternate gene names: 108797419

Gene position: 487615-487094 (Counterclockwise)

Preceding gene: 108797420

Following gene: 108797418

Centisome position: 8.55

GC content: 67.24

Gene sequence:

>522_bases
ATGACCCAGCCCACCGGTCATCGTGAAGTGACCCTCGAGGTCGACGGCCGGCCACACACACTGCACCTCGACAACCGCGT
CACCCTTCTCGACGCGCTGCGCGAACACCTCGGCGTGACCGCACCCAAAAAGGGATGCGACCACGGGCAGTGCGGTTCGT
GCACCGTGCTGCGCGACGGACGGCGGGTCACCACCTGCCTGACGTTCGCGGTCGCCGCCGACGGTGCGCACATCACCACC
GCCGCCGGTCTCGGCGACGGCGACGATCTGCACCCCGTCGCGCAGGCGTTCTCCGACGAGGACGGCTTCCAGTGCGGGTA
CTGCACACCGGGCCAGATCTGTTCGGCTGTCGGCATGCTCGACGAAGTCAAGTCCGGCGCACCGAGTTTCGTGTCCGACG
ATCTCGAGGCGGTACCGGAACTGACCGACGACGAGATCCGGGAACGGATGAGCGGCAACCTGTGCCGCTGCGCGGCGTAC
CCGAACATCGTCGCCGCGATCGAACGGGCTTCAGTTCAGTGA

Upstream 100 bases:

>100_bases
CGGTCCCGTTGACGACGGGGATCGCCGCTGTCCTGGCGACACCGCGGGCGGACAACCACCCGCGACGTTTCGCGGTCAGG
CCCTGGGGTATCCGCCCGCC

Downstream 100 bases:

>100_bases
GGCGGGTTCAGTGAGGGCGTTCGACTACCACCTGGCTGAGAGCCCGGCCGATGCGGTGGCAACACTGACCGCGCATCCCG
ACGCCGCCTATCTCGCCGGC

Product: (2Fe-2S)-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTQPTGHREVTLEVDGRPHTLHLDNRVTLLDALREHLGVTAPKKGCDHGQCGSCTVLRDGRRVTTCLTFAVAADGAHITT
AAGLGDGDDLHPVAQAFSDEDGFQCGYCTPGQICSAVGMLDEVKSGAPSFVSDDLEAVPELTDDEIRERMSGNLCRCAAY
PNIVAAIERASVQ

Sequences:

>Translated_173_residues
MTQPTGHREVTLEVDGRPHTLHLDNRVTLLDALREHLGVTAPKKGCDHGQCGSCTVLRDGRRVTTCLTFAVAADGAHITT
AAGLGDGDDLHPVAQAFSDEDGFQCGYCTPGQICSAVGMLDEVKSGAPSFVSDDLEAVPELTDDEIRERMSGNLCRCAAY
PNIVAAIERASVQ
>Mature_172_residues
TQPTGHREVTLEVDGRPHTLHLDNRVTLLDALREHLGVTAPKKGCDHGQCGSCTVLRDGRRVTTCLTFAVAADGAHITTA
AGLGDGDDLHPVAQAFSDEDGFQCGYCTPGQICSAVGMLDEVKSGAPSFVSDDLEAVPELTDDEIRERMSGNLCRCAAYP
NIVAAIERASVQ

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786480, Length=162, Percent_Identity=61.1111111111111, Blast_Score=207, Evalue=2e-55,
Organism=Escherichia coli, GI1789232, Length=164, Percent_Identity=37.8048780487805, Blast_Score=102, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17540638, Length=154, Percent_Identity=31.1688311688312, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32566215, Length=156, Percent_Identity=29.4871794871795, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17539860, Length=175, Percent_Identity=29.1428571428571, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24647199, Length=169, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24647197, Length=177, Percent_Identity=30.5084745762712, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24647195, Length=177, Percent_Identity=30.5084745762712, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24647201, Length=170, Percent_Identity=28.2352941176471, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI17737937, Length=152, Percent_Identity=35.5263157894737, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24647193, Length=175, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 18351; Mature: 18219

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPTGHREVTLEVDGRPHTLHLDNRVTLLDALREHLGVTAPKKGCDHGQCGSCTVLRDG
CCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
RRVTTCLTFAVAADGAHITTAAGLGDGDDLHPVAQAFSDEDGFQCGYCTPGQICSAVGML
CEEHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
DEVKSGAPSFVSDDLEAVPELTDDEIRERMSGNLCRCAAYPNIVAAIERASVQ
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TQPTGHREVTLEVDGRPHTLHLDNRVTLLDALREHLGVTAPKKGCDHGQCGSCTVLRDG
CCCCCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
RRVTTCLTFAVAADGAHITTAAGLGDGDDLHPVAQAFSDEDGFQCGYCTPGQICSAVGML
CEEHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH
DEVKSGAPSFVSDDLEAVPELTDDEIRERMSGNLCRCAAYPNIVAAIERASVQ
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]