Definition | Mycobacterium sp. MCS chromosome, complete genome. |
---|---|
Accession | NC_008146 |
Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797404
Identifier: 108797404
GI number: 108797404
Start: 469625
End: 470968
Strand: Reverse
Name: 108797404
Synonym: Mmcs_0424
Alternate gene names: NA
Gene position: 470968-469625 (Counterclockwise)
Preceding gene: 108797405
Following gene: 108797401
Centisome position: 8.25
GC content: 66.22
Gene sequence:
>1344_bases ATGGATGACTATTCCGCGACGCAAGTACGAGCCGCACACGCCCCGCACGACGAGCTGCGGCGCGGCGAACGTCCGATCCC GCCCGACCACGACCCGTTCTACCGGGCCCCGGAGGGCTACGAGCACGCGGAACCGGGCACGGTGTTGCGTTCGCGCGACG TGGAGATCGGATTCCTCGGTCTCGTCGGCCAGCCCGTGAAAGCCGTCCAGCTGCTGTACCGCACCACGAATCTGCACGAA GAACCGGAAGTCGCCGTGACGACCGTGCTCGTCCCGGCGCAGCGCGAGCCAGACGTCGCTTATCCGATGCTCTCTTATCA GTGCGCGATCGACGCCGTGGCGTCACGCTGTTTCCCCTCGTTCGCCATGCGGCGCGGCGCGGGACCGATCGGTGCGTTCA CACAAGCGGAGTACTTGTTGGTGACCGCCGCGCTGGCCGAAGGCTGGGCGGTTTGCGTACCGGATCACGAAGGCTGCCAT GGCATGTGGGGCGCTCCCGTCGAGCCCGGCTACCGCATCCTGGACGGGCTGCGCGCCGCTCAACAATGCGAGCGCTTGGA TTTGTCGCCGTCTGCGCCGGTGGGTCTGTGGGGATACTCCGGCGGAGGCTTGGCCTCGGCGTGGGCGGCCGAACTGTGTG AGCGATATGCACCGGAGCTCAATATCGTTGGCGCCGTGCTGGGTTCACCTGTCGGCGACCCGGGGAGTGTGGCGCGCCGC CTCAACGGCAGCTTCTTCGCCGGCCTCGCCGCGCTGATGATCTCCGCACTGACGCAAGTCTTCCCCGGCGCGCAGAACGT CGTCGACGAGCACGCGACCGACGAGGGTAAGGCGCTACTCGAGAAGTTGCAGACGATGACGACGGCCCAGGCGGTCTGGC AGTTGCGCAACGTCGACATCGGGTCCTACGTCGACATGACGGCCGACGAACTGTGGGACCTGCCCGAAGTGCGCCACATC TTCGACGAGACCAAGCTCGGCAAATCCACGCCCAAGCCCCCCGTGCTGGTCATCCAGGCGGTGCACGACGGAATCATCAG CGTCGACGATGTCGATGCACTGGTGGCCGAGTATGAACGCATCGGTGCCGCGGTCACCTACCACCGCGACCGGTTCTGCG GTCATCTGCTGTTGCATCCGCTGTCGGCGCCCATGACGCTGAGGTGGCTGCGCGACCGGTTCACCGACCGGCCGGTCTAC GAGCACAAAACACGCACGGTGTGGCCGACGATGTTCAACCCGTCGACGTACTTGGGCATGGTCAAGTTGGGCGTCATCAC GGCGAAGGTCGTCCTGGGGCGCTCCGTCGAACGCCAACCGCTGTCGACGACGGATGCCCCGTAA
Upstream 100 bases:
>100_bases CGGCTGACCGAGGGTTGACCTCCCGGTACCGCGGGTAATGGCTACTTCGGATGGCGTGGCGTGCGCGCCGTCAGCAATAC GCCGAGGAGGCACCACACCG
Downstream 100 bases:
>100_bases CCAGGCTCCGCTCAATCCGCTTTCGGATGACGATCCCGCGCGAAAGCGTTGCCGTGGGTCGGCTCCGTCGACTCGGACGT GAAGCCGAAGGTCCGCAGAA
Product: triacylglycerol lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MDDYSATQVRAAHAPHDELRRGERPIPPDHDPFYRAPEGYEHAEPGTVLRSRDVEIGFLGLVGQPVKAVQLLYRTTNLHE EPEVAVTTVLVPAQREPDVAYPMLSYQCAIDAVASRCFPSFAMRRGAGPIGAFTQAEYLLVTAALAEGWAVCVPDHEGCH GMWGAPVEPGYRILDGLRAAQQCERLDLSPSAPVGLWGYSGGGLASAWAAELCERYAPELNIVGAVLGSPVGDPGSVARR LNGSFFAGLAALMISALTQVFPGAQNVVDEHATDEGKALLEKLQTMTTAQAVWQLRNVDIGSYVDMTADELWDLPEVRHI FDETKLGKSTPKPPVLVIQAVHDGIISVDDVDALVAEYERIGAAVTYHRDRFCGHLLLHPLSAPMTLRWLRDRFTDRPVY EHKTRTVWPTMFNPSTYLGMVKLGVITAKVVLGRSVERQPLSTTDAP
Sequences:
>Translated_447_residues MDDYSATQVRAAHAPHDELRRGERPIPPDHDPFYRAPEGYEHAEPGTVLRSRDVEIGFLGLVGQPVKAVQLLYRTTNLHE EPEVAVTTVLVPAQREPDVAYPMLSYQCAIDAVASRCFPSFAMRRGAGPIGAFTQAEYLLVTAALAEGWAVCVPDHEGCH GMWGAPVEPGYRILDGLRAAQQCERLDLSPSAPVGLWGYSGGGLASAWAAELCERYAPELNIVGAVLGSPVGDPGSVARR LNGSFFAGLAALMISALTQVFPGAQNVVDEHATDEGKALLEKLQTMTTAQAVWQLRNVDIGSYVDMTADELWDLPEVRHI FDETKLGKSTPKPPVLVIQAVHDGIISVDDVDALVAEYERIGAAVTYHRDRFCGHLLLHPLSAPMTLRWLRDRFTDRPVY EHKTRTVWPTMFNPSTYLGMVKLGVITAKVVLGRSVERQPLSTTDAP >Mature_447_residues MDDYSATQVRAAHAPHDELRRGERPIPPDHDPFYRAPEGYEHAEPGTVLRSRDVEIGFLGLVGQPVKAVQLLYRTTNLHE EPEVAVTTVLVPAQREPDVAYPMLSYQCAIDAVASRCFPSFAMRRGAGPIGAFTQAEYLLVTAALAEGWAVCVPDHEGCH GMWGAPVEPGYRILDGLRAAQQCERLDLSPSAPVGLWGYSGGGLASAWAAELCERYAPELNIVGAVLGSPVGDPGSVARR LNGSFFAGLAALMISALTQVFPGAQNVVDEHATDEGKALLEKLQTMTTAQAVWQLRNVDIGSYVDMTADELWDLPEVRHI FDETKLGKSTPKPPVLVIQAVHDGIISVDDVDALVAEYERIGAAVTYHRDRFCGHLLLHPLSAPMTLRWLRDRFTDRPVY EHKTRTVWPTMFNPSTYLGMVKLGVITAKVVLGRSVERQPLSTTDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: NA
Molecular weight: Translated: 48851; Mature: 48851
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYSATQVRAAHAPHDELRRGERPIPPDHDPFYRAPEGYEHAEPGTVLRSRDVEIGFLG CCCCCCHHEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEC LVGQPVKAVQLLYRTTNLHEEPEVAVTTVLVPAQREPDVAYPMLSYQCAIDAVASRCFPS CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH FAMRRGAGPIGAFTQAEYLLVTAALAEGWAVCVPDHEGCHGMWGAPVEPGYRILDGLRAA HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH QQCERLDLSPSAPVGLWGYSGGGLASAWAAELCERYAPELNIVGAVLGSPVGDPGSVARR HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHH LNGSFFAGLAALMISALTQVFPGAQNVVDEHATDEGKALLEKLQTMTTAQAVWQLRNVDI HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC GSYVDMTADELWDLPEVRHIFDETKLGKSTPKPPVLVIQAVHDGIISVDDVDALVAEYER CCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHH IGAAVTYHRDRFCGHLLLHPLSAPMTLRWLRDRFTDRPVYEHKTRTVWPTMFNPSTYLGM HHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCEECCCCCCCHHHHHH VKLGVITAKVVLGRSVERQPLSTTDAP HHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDDYSATQVRAAHAPHDELRRGERPIPPDHDPFYRAPEGYEHAEPGTVLRSRDVEIGFLG CCCCCCHHEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEC LVGQPVKAVQLLYRTTNLHEEPEVAVTTVLVPAQREPDVAYPMLSYQCAIDAVASRCFPS CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH FAMRRGAGPIGAFTQAEYLLVTAALAEGWAVCVPDHEGCHGMWGAPVEPGYRILDGLRAA HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH QQCERLDLSPSAPVGLWGYSGGGLASAWAAELCERYAPELNIVGAVLGSPVGDPGSVARR HHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHH LNGSFFAGLAALMISALTQVFPGAQNVVDEHATDEGKALLEKLQTMTTAQAVWQLRNVDI HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC GSYVDMTADELWDLPEVRHIFDETKLGKSTPKPPVLVIQAVHDGIISVDDVDALVAEYER CCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHH IGAAVTYHRDRFCGHLLLHPLSAPMTLRWLRDRFTDRPVYEHKTRTVWPTMFNPSTYLGM HHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCEECCCCCCCHHHHHH VKLGVITAKVVLGRSVERQPLSTTDAP HHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]