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The map label for this gene is 108797401

Identifier: 108797401

GI number: 108797401

Start: 466715

End: 467242

Strand: Reverse

Name: 108797401

Synonym: Mmcs_0421

Alternate gene names: NA

Gene position: 467242-466715 (Counterclockwise)

Preceding gene: 108797404

Following gene: 108797400

Centisome position: 8.19

GC content: 66.1

Gene sequence:

>528_bases
ATGAACGCACGCTCGACGTACCCTGGCGACGTGGCCGTCACCATCCCCGAGGTGCACCCCGACCTGACCGCGCTGGCACC
CCTGCTCGGCACGTGGTCCGGCAAGGGTTCGGGTGAGTATCCGACGATCGAACCGTTCGACTACACCGAGGAGATCACGT
TCGGCCACACCGGCAAGCCGTTCCTCACCTACGTCCAGCGCACGCGCGCTGCAGACGACGGTCGGCCGCTACACGCCGAG
ACCGGCTACCTGCGCGCGCCCACGCCGAACAACGTCGAGTGGATCCTCGCGCATCCGACCGGCATCACCGAGATCCAAGA
GGGGCCGTTGACCGCTGACGGTGACACGTTGCGGATGGACCTCATCTCGACCGACATCGGCCGAAGCGAGTCCGCGAAAG
AGGTTATGGCCGTTGGCCGGTCGATGCAGATCAGCGGCGACACCCTGACATACACCTTGCGGATGGCAGCGGTGGGACGG
CCACTGCAGCACCATTTGTCGGCCGTCCTGCACCGGGTGTCGAGCTAG

Upstream 100 bases:

>100_bases
AGGCTCTGCTGTCATGGCGTCCGTTCTCGTCGGATGACGCCGCTTACCCGTGGCGAGGTCCACCAAACCTCGGCGGGCGC
CGTCGGTAATCGGCGCCACG

Downstream 100 bases:

>100_bases
CGTACTGACCACGTCCTGGTCGCACCGCCGTCCCATAACAGCCCGTAAGAGCAACTTCGGCCGGTTAACGATGTTGCCCC
CTTTGCAATTTGCTGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNARSTYPGDVAVTIPEVHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHTGKPFLTYVQRTRAADDGRPLHAE
TGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVGR
PLQHHLSAVLHRVSS

Sequences:

>Translated_175_residues
MNARSTYPGDVAVTIPEVHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHTGKPFLTYVQRTRAADDGRPLHAE
TGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVGR
PLQHHLSAVLHRVSS
>Mature_175_residues
MNARSTYPGDVAVTIPEVHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHTGKPFLTYVQRTRAADDGRPLHAE
TGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVGR
PLQHHLSAVLHRVSS

Specific function: May play a role in the intracellular transport of hydrophobic ligands (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0678 family

Homologues:

Organism=Homo sapiens, GI256818827, Length=165, Percent_Identity=32.7272727272727, Blast_Score=77, Evalue=7e-15,
Organism=Homo sapiens, GI256818825, Length=165, Percent_Identity=31.5151515151515, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y408_MYCSJ (A3PTJ4)

Other databases:

- EMBL:   CP000580
- RefSeq:   YP_001068712.1
- ProteinModelPortal:   A3PTJ4
- SMR:   A3PTJ4
- STRING:   A3PTJ4
- EnsemblBacteria:   EBMYCT00000052161
- GeneID:   4876154
- GenomeReviews:   CP000580_GR
- KEGG:   mjl:Mjls_0408
- eggNOG:   NOG83928
- GeneTree:   EBGT00050000017663
- HOGENOM:   HBG445899
- OMA:   WADEPRD
- ProtClustDB:   CLSK792029
- BioCyc:   MSP164757:MJLS_0408-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01297
- InterPro:   IPR011038
- InterPro:   IPR014878
- InterPro:   IPR022939

Pfam domain/function: PF08768 DUF1794; SSF50814 Calycin

EC number: NA

Molecular weight: Translated: 18998; Mature: 18998

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: BINDING 140-140

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARSTYPGDVAVTIPEVHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHTGKP
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCH
FLTYVQRTRAADDGRPLHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMD
HHHHHHHHHCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCCEECCCCCCCCCCEEEEE
LISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVGRPLQHHLSAVLHRVSS
EECCCCCCCCHHHHHHHCCCCEEECCCEEEEEEEEHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNARSTYPGDVAVTIPEVHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHTGKP
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCH
FLTYVQRTRAADDGRPLHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMD
HHHHHHHHHCCCCCCEEECCCCEEECCCCCCCEEEEECCCCCCEECCCCCCCCCCEEEEE
LISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVGRPLQHHLSAVLHRVSS
EECCCCCCCCHHHHHHHCCCCEEECCCEEEEEEEEHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA