Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797405
Identifier: 108797405
GI number: 108797405
Start: 471085
End: 472338
Strand: Reverse
Name: 108797405
Synonym: Mmcs_0425
Alternate gene names: NA
Gene position: 472338-471085 (Counterclockwise)
Preceding gene: 108797406
Following gene: 108797404
Centisome position: 8.28
GC content: 65.87
Gene sequence:
>1254_bases GTGCAGGACCATCTGCCCCCGCGCGCCGTCCCTCGATCGGTCCGCGTATGGGGGCCGATCGTCTTGTCGGTTGCCTTGGC GTTGTACGTCGCGGCGTACCTGCGGTGGCCCAGCCTGGCCAGCCAGGTCGACCTGTTGGTGTACCGGTTCGGGGCAGAGC GGGCCTGGGACGGCCAGGACCTGTACTCGGTGGGCCTGACCGGCAACCCAGACACGATGCTGTTCATATACACGCCGTTC TCCGCGCTGTGCTTCCTCCCGCTGATCGGGCTGAGCCAGCCTGGCGTTCTCGTCCTCGGTCTCCTGGTGAACGTCGCATG CATGGGCTACATCGTCAGCCGGATGCTCAGTGCCGCAGGAATCAGGACCGCAACGGGTCTGTGGGGTTTGACGGCGCTTC TGATGGCCCCGATCATCTGGCTCGAGCCGGTCCGGCTCTCACTACAGCTCGGTCAGATCAATGTGCTGATCATGGCCATC GTCGTCGCGGACCTGCTGGCGCAACCGTCGCGCAGGTGGACGGGGATGGGTATCGGGGTCGCCGCCGGGATCAAACTGAC TCCCGCGCTCTTCATCGTCTTCCTCGTCGCAACCGGGCGACGTCGCGAGGCACTCGTCGCCGGATTGACGTTCGTCTCCA CCATCGCCGTCGGATTCGTCCTGCTGCCGGCCGATTCAACAGAATTCTGGCTGCAGAAGAGGTTCCAGGATGTCGGACGG ATCTCCAGCGACCCTCTGGCGAACACCAGCCTGGCCGGACTTCTCACGCGCTTCAACTGGGTCCCGCCGTGGCCGACCGT GGCCGCAGGCGTATTCGCGATCGTCGCCATCGCGATCGCCGCGCTGGCGTGGCGCCGCGGTCAACGGCTCTTGAGCGTCG CCATCGCGGGGATGACCTCGGCCGCCGCGTCACCCTTCAGCTGGAGCCATCACTGGGTGTGGTTCGCACCGCTTCTCGTC CATCTCGGGTACCTCGGCTATGTACACCGCTCGCGCGTCGCGGCGCTGGCCATGTGGGTGCTGGCGGCGATCTTCGGGGG CTGGTTCGTCGCATCGCGAAGCTTGCCCCCACAAGCAGGTCTGATGTCCTTGCGCCACCCCGGAACATGGGATCAGCTAC TTCCAGCGGCTTACCTTTTCGCGCTCACCATCGTGCTCATCTGCAGCGTGTGCGGGCTCTGGCGGGCACGACAGCACCCA CCGGCCGGAGTCGACGCAACGGTGGAGAGCAGTCGACAGCGAGCGAGCATCTGA
Upstream 100 bases:
>100_bases CCGAGACCGTTTACCGTTCGCTGCGCTCGGGTAGGGGCGCTTCCAGGGTTGACCGCGACACTCGCCCGTCGACCGACACC GAGGAAGGAGTCGCCTCATC
Downstream 100 bases:
>100_bases CCATCAGAGGCGGTTTCGGCTGACCGAGGGTTGACCTCCCGGTACCGCGGGTAATGGCTACTTCGGATGGCGTGGCGTGC GCGCCGTCAGCAATACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-D-mannose-alpha-(1-2)-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; PPM-dependent mannosyltransferase; Polyprenol-phosphate-mannose alpha-mannosyltransferase; PPM alpha-mannosyltransferase [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MQDHLPPRAVPRSVRVWGPIVLSVALALYVAAYLRWPSLASQVDLLVYRFGAERAWDGQDLYSVGLTGNPDTMLFIYTPF SALCFLPLIGLSQPGVLVLGLLVNVACMGYIVSRMLSAAGIRTATGLWGLTALLMAPIIWLEPVRLSLQLGQINVLIMAI VVADLLAQPSRRWTGMGIGVAAGIKLTPALFIVFLVATGRRREALVAGLTFVSTIAVGFVLLPADSTEFWLQKRFQDVGR ISSDPLANTSLAGLLTRFNWVPPWPTVAAGVFAIVAIAIAALAWRRGQRLLSVAIAGMTSAAASPFSWSHHWVWFAPLLV HLGYLGYVHRSRVAALAMWVLAAIFGGWFVASRSLPPQAGLMSLRHPGTWDQLLPAAYLFALTIVLICSVCGLWRARQHP PAGVDATVESSRQRASI
Sequences:
>Translated_417_residues MQDHLPPRAVPRSVRVWGPIVLSVALALYVAAYLRWPSLASQVDLLVYRFGAERAWDGQDLYSVGLTGNPDTMLFIYTPF SALCFLPLIGLSQPGVLVLGLLVNVACMGYIVSRMLSAAGIRTATGLWGLTALLMAPIIWLEPVRLSLQLGQINVLIMAI VVADLLAQPSRRWTGMGIGVAAGIKLTPALFIVFLVATGRRREALVAGLTFVSTIAVGFVLLPADSTEFWLQKRFQDVGR ISSDPLANTSLAGLLTRFNWVPPWPTVAAGVFAIVAIAIAALAWRRGQRLLSVAIAGMTSAAASPFSWSHHWVWFAPLLV HLGYLGYVHRSRVAALAMWVLAAIFGGWFVASRSLPPQAGLMSLRHPGTWDQLLPAAYLFALTIVLICSVCGLWRARQHP PAGVDATVESSRQRASI >Mature_417_residues MQDHLPPRAVPRSVRVWGPIVLSVALALYVAAYLRWPSLASQVDLLVYRFGAERAWDGQDLYSVGLTGNPDTMLFIYTPF SALCFLPLIGLSQPGVLVLGLLVNVACMGYIVSRMLSAAGIRTATGLWGLTALLMAPIIWLEPVRLSLQLGQINVLIMAI VVADLLAQPSRRWTGMGIGVAAGIKLTPALFIVFLVATGRRREALVAGLTFVSTIAVGFVLLPADSTEFWLQKRFQDVGR ISSDPLANTSLAGLLTRFNWVPPWPTVAAGVFAIVAIAIAALAWRRGQRLLSVAIAGMTSAAASPFSWSHHWVWFAPLLV HLGYLGYVHRSRVAALAMWVLAAIFGGWFVASRSLPPQAGLMSLRHPGTWDQLLPAAYLFALTIVLICSVCGLWRARQHP PAGVDATVESSRQRASI
Specific function: Responsible for the addition of alpha-(1-2) mannose branches to the linear mannan core on the biosynthetic pathway to mature Lipoarabinomannan (LAM) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018584 [H]
Pfam domain/function: PF09594 DUF2029 [H]
EC number: NA
Molecular weight: Translated: 45149; Mature: 45149
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDHLPPRAVPRSVRVWGPIVLSVALALYVAAYLRWPSLASQVDLLVYRFGAERAWDGQD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC LYSVGLTGNPDTMLFIYTPFSALCFLPLIGLSQPGVLVLGLLVNVACMGYIVSRMLSAAG CEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC IRTATGLWGLTALLMAPIIWLEPVRLSLQLGQINVLIMAIVVADLLAQPSRRWTGMGIGV CHHHHHHHHHHHHHHHHHHHHCCHHEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHH AAGIKLTPALFIVFLVATGRRREALVAGLTFVSTIAVGFVLLPADSTEFWLQKRFQDVGR HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHC ISSDPLANTSLAGLLTRFNWVPPWPTVAAGVFAIVAIAIAALAWRRGQRLLSVAIAGMTS CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAASPFSWSHHWVWFAPLLVHLGYLGYVHRSRVAALAMWVLAAIFGGWFVASRSLPPQAG HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LMSLRHPGTWDQLLPAAYLFALTIVLICSVCGLWRARQHPPAGVDATVESSRQRASI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MQDHLPPRAVPRSVRVWGPIVLSVALALYVAAYLRWPSLASQVDLLVYRFGAERAWDGQD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC LYSVGLTGNPDTMLFIYTPFSALCFLPLIGLSQPGVLVLGLLVNVACMGYIVSRMLSAAG CEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC IRTATGLWGLTALLMAPIIWLEPVRLSLQLGQINVLIMAIVVADLLAQPSRRWTGMGIGV CHHHHHHHHHHHHHHHHHHHHCCHHEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHH AAGIKLTPALFIVFLVATGRRREALVAGLTFVSTIAVGFVLLPADSTEFWLQKRFQDVGR HCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHC ISSDPLANTSLAGLLTRFNWVPPWPTVAAGVFAIVAIAIAALAWRRGQRLLSVAIAGMTS CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAASPFSWSHHWVWFAPLLVHLGYLGYVHRSRVAALAMWVLAAIFGGWFVASRSLPPQAG HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LMSLRHPGTWDQLLPAAYLFALTIVLICSVCGLWRARQHPPAGVDATVESSRQRASI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]