Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797335
Identifier: 108797335
GI number: 108797335
Start: 396659
End: 397870
Strand: Reverse
Name: 108797335
Synonym: Mmcs_0355
Alternate gene names: NA
Gene position: 397870-396659 (Counterclockwise)
Preceding gene: 108797339
Following gene: 108797333
Centisome position: 6.97
GC content: 71.37
Gene sequence:
>1212_bases GTGGACCCCACCGCCGAACCGGCCGACCGTTGCTTCGATGTCCTCGTCGTCGGCGGCGGCAACGCCGGTGTCAGCGCGGC GGCGCGGCTGATCCGTAAGGGCGTCACCGACGTGGCGCTGATCGAACCGCAGCGCGTCCACACCTACCGGCCTTTGCTGT CCTATGTCGGCGGCGGACAGGCGGCGATGCGGGACGCCGAGCGGACCCAGCGGTCGGTGACCCCACGCCGATGCACGTGG CTGCAGGACGCCGCGGCGATGATCGATGCGCCCAACCGCACGGTGTCGTGCTCGTCGGGCCGCCGCTACCGCTATCGGGA TCTGATCCTCGGCACCGGGCTGGTGCCCGACACCGACGCGCTGCCCGGGATCCACACCGCGCTGGACACGCCGGCGGTCG CGAGCAACTACGTGGACCGCGCCGAGGAGACCTGGCAACTCGTGCAGGCCATGCCCCCCAGCGGGCGTGCGGTGTTCACC GTGCCGCGCCCGCCGGTCAGCTGCACCGCGACGACGCTCAAACCGCTGTTCCTGGCCGCCGCGCACTGGAAGCGCACCGG GCGCTTCCCCGGCGTCGACATCACCCTCGTCGTCGACCGGCCACACCTGCTCCCCGCGCCGCGCATCGACGACCGGCTGC GCGACCATCTGCGGGCCCTGGAAGTGCGCGTGCTGTTCGACACCGCGGTGACCGCGCTGAGCCCCGACCAGCGCAACATC ACGGTGACCGGCCGCGACGGCTCCAGCGAGACACTGCCGTACGACATGCTGCACCTCGTACCGCCGTTCCGCGGCGTCCG CTGGCTGGAGGGTTCGGGCCTGACGAATGGGCGGCCCCACGGGCTCATCGACATCGACCCCGAAACGCTGAGACACCGCA CACATCCGGAGATCTGGGCGGCGGGCGACGCCGCGGCCGTCGAAACCGATCCGTCGGGCGGTGCGCTGCGGCGGCAGGTC TCGATCCTGGTCGAGAACCTGCTCGCCGCCCGCGAGGGCGGAGACCTCCAGCGCTACGACGGCTACACGGTCGCGCCGGT CACGACCGACGCGCACCACCTGATACCAGGGGAGTACGACCGGACCGGATCGGTGGCGTCGTCGCTGCCGTCGTTCGTCG ACCCACTCGAATCTCGCCGCACGGCGTGGGCGTTCGACCGCTACGTGCTGCCGCGCACCTACTGGAACCTCATCCTCAGA GGGCGCGTATAA
Upstream 100 bases:
>100_bases CCACTGGCACCCACGAGTTCGCTGGAACCCACCGGCAGTGCCCGCCGCAGCCTAACGCAGCGCGGGGTTGACGGGGCACC GCTGCGGGTAACGCACCGGG
Downstream 100 bases:
>100_bases ATCGTCATCGCCGCCGCGCCAGACCGGCCGCCGCGGATCGGACCGCGCCGGTCAGTCGCGCCACCAGCGGGCTGTCGAGT TTCCAGCACTGCCAGTACAA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Twin-Arginine Translocation Pathway Signal; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide-Quinone Reductase; Sulfide Quinone Oxidoreductase-Like Protein; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Flavoprotein Subunit; Sulfide Dehydrogenase Related Protein; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MDPTAEPADRCFDVLVVGGGNAGVSAAARLIRKGVTDVALIEPQRVHTYRPLLSYVGGGQAAMRDAERTQRSVTPRRCTW LQDAAAMIDAPNRTVSCSSGRRYRYRDLILGTGLVPDTDALPGIHTALDTPAVASNYVDRAEETWQLVQAMPPSGRAVFT VPRPPVSCTATTLKPLFLAAAHWKRTGRFPGVDITLVVDRPHLLPAPRIDDRLRDHLRALEVRVLFDTAVTALSPDQRNI TVTGRDGSSETLPYDMLHLVPPFRGVRWLEGSGLTNGRPHGLIDIDPETLRHRTHPEIWAAGDAAAVETDPSGGALRRQV SILVENLLAAREGGDLQRYDGYTVAPVTTDAHHLIPGEYDRTGSVASSLPSFVDPLESRRTAWAFDRYVLPRTYWNLILR GRV
Sequences:
>Translated_403_residues MDPTAEPADRCFDVLVVGGGNAGVSAAARLIRKGVTDVALIEPQRVHTYRPLLSYVGGGQAAMRDAERTQRSVTPRRCTW LQDAAAMIDAPNRTVSCSSGRRYRYRDLILGTGLVPDTDALPGIHTALDTPAVASNYVDRAEETWQLVQAMPPSGRAVFT VPRPPVSCTATTLKPLFLAAAHWKRTGRFPGVDITLVVDRPHLLPAPRIDDRLRDHLRALEVRVLFDTAVTALSPDQRNI TVTGRDGSSETLPYDMLHLVPPFRGVRWLEGSGLTNGRPHGLIDIDPETLRHRTHPEIWAAGDAAAVETDPSGGALRRQV SILVENLLAAREGGDLQRYDGYTVAPVTTDAHHLIPGEYDRTGSVASSLPSFVDPLESRRTAWAFDRYVLPRTYWNLILR GRV >Mature_403_residues MDPTAEPADRCFDVLVVGGGNAGVSAAARLIRKGVTDVALIEPQRVHTYRPLLSYVGGGQAAMRDAERTQRSVTPRRCTW LQDAAAMIDAPNRTVSCSSGRRYRYRDLILGTGLVPDTDALPGIHTALDTPAVASNYVDRAEETWQLVQAMPPSGRAVFT VPRPPVSCTATTLKPLFLAAAHWKRTGRFPGVDITLVVDRPHLLPAPRIDDRLRDHLRALEVRVLFDTAVTALSPDQRNI TVTGRDGSSETLPYDMLHLVPPFRGVRWLEGSGLTNGRPHGLIDIDPETLRHRTHPEIWAAGDAAAVETDPSGGALRRQV SILVENLLAAREGGDLQRYDGYTVAPVTTDAHHLIPGEYDRTGSVASSLPSFVDPLESRRTAWAFDRYVLPRTYWNLILR GRV
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=395, Percent_Identity=27.3417721518987, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI115534373, Length=355, Percent_Identity=22.8169014084507, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17539680, Length=439, Percent_Identity=23.2346241457859, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24657386, Length=389, Percent_Identity=25.9640102827763, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24657391, Length=389, Percent_Identity=25.9640102827763, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44218; Mature: 44218
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPTAEPADRCFDVLVVGGGNAGVSAAARLIRKGVTDVALIEPQRVHTYRPLLSYVGGGQ CCCCCCHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCH AAMRDAERTQRSVTPRRCTWLQDAAAMIDAPNRTVSCSSGRRYRYRDLILGTGLVPDTDA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEECCCCCCCCC LPGIHTALDTPAVASNYVDRAEETWQLVQAMPPSGRAVFTVPRPPVSCTATTLKPLFLAA CCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHHHHHH AHWKRTGRFPGVDITLVVDRPHLLPAPRIDDRLRDHLRALEVRVLFDTAVTALSPDQRNI HHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHCCCCCCEE TVTGRDGSSETLPYDMLHLVPPFRGVRWLEGSGLTNGRPHGLIDIDPETLRHRTHPEIWA EEECCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCEEECCHHHHHCCCCCCEEE AGDAAAVETDPSGGALRRQVSILVENLLAAREGGDLQRYDGYTVAPVTTDAHHLIPGEYD CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC RTGSVASSLPSFVDPLESRRTAWAFDRYVLPRTYWNLILRGRV CCCHHHHHHHHHHHHHHHCCHHHHHHHEECHHHHHHHHEECCC >Mature Secondary Structure MDPTAEPADRCFDVLVVGGGNAGVSAAARLIRKGVTDVALIEPQRVHTYRPLLSYVGGGQ CCCCCCHHHHCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCH AAMRDAERTQRSVTPRRCTWLQDAAAMIDAPNRTVSCSSGRRYRYRDLILGTGLVPDTDA HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEECCCCCCCCC LPGIHTALDTPAVASNYVDRAEETWQLVQAMPPSGRAVFTVPRPPVSCTATTLKPLFLAA CCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHHHHHH AHWKRTGRFPGVDITLVVDRPHLLPAPRIDDRLRDHLRALEVRVLFDTAVTALSPDQRNI HHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHCCCCCCEE TVTGRDGSSETLPYDMLHLVPPFRGVRWLEGSGLTNGRPHGLIDIDPETLRHRTHPEIWA EEECCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCCEEECCHHHHHCCCCCCEEE AGDAAAVETDPSGGALRRQVSILVENLLAAREGGDLQRYDGYTVAPVTTDAHHLIPGEYD CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC RTGSVASSLPSFVDPLESRRTAWAFDRYVLPRTYWNLILRGRV CCCHHHHHHHHHHHHHHHCCHHHHHHHEECHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA