Click here to switch to the map view.

The map label for this gene is 108797339

Identifier: 108797339

GI number: 108797339

Start: 400530

End: 400985

Strand: Reverse

Name: 108797339

Synonym: Mmcs_0359

Alternate gene names: NA

Gene position: 400985-400530 (Counterclockwise)

Preceding gene: 108797340

Following gene: 108797335

Centisome position: 7.03

GC content: 64.25

Gene sequence:

>456_bases
ATGACACTCACGAGCACATCCACTGGTTCGCACAGCGCCTTCCACTACGGCAACCCGTCGTTCGACTGCGACCGGGTCCG
GATGCGGGCCCGCTGCCGTCAACTCGCAACGGTCGTCACGGTCACGGGCGACATCGACGCCGACAACCTGTCGTGCGTCG
CGGATTACGCGAGGCGGTTCGTCCTCGCGGAGAAGCCGTTCATCCTCGATCTCAGTGGTGTGAGTACCTTTGCCGCAGAA
GGCCTCTCACTGTTCTACGAAATCGACGCCCGTTGCGCCGAAGCCGACGTCGAATGGTCGGTGATCGGCAGCCAACCCGT
TCTGCAGGTGCTGCGCGCCTCCGGCACTCTCGACGACATGCCGGTGACCGCCTCGGTTCCGGAAGCCTTGCATCACTTCA
GCGAAGGCATCCTGGCCCGGCGCCGCCTGCTGCCCCTCTTGACCAAGACAGCCTGA

Upstream 100 bases:

>100_bases
AGCTACCCGGCGGCCTTAAATTCCCCGCATAACTTCGGAGTCACGTTGAGGTGGCAAAACAACGACGCCATTCCAGCGAA
ACGCCGACGGGAGACCGCTC

Downstream 100 bases:

>100_bases
CACGGAAAGGCACATCCCATGCTCATCGACGTTCGCTGGCTGACATTCCTGCTCAAGCGCCGCCACCACGTGCATCACGT
GCAGTCCGCCGCCTGACCTC

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: STAS Domain-Containing Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTLTSTSTGSHSAFHYGNPSFDCDRVRMRARCRQLATVVTVTGDIDADNLSCVADYARRFVLAEKPFILDLSGVSTFAAE
GLSLFYEIDARCAEADVEWSVIGSQPVLQVLRASGTLDDMPVTASVPEALHHFSEGILARRRLLPLLTKTA

Sequences:

>Translated_151_residues
MTLTSTSTGSHSAFHYGNPSFDCDRVRMRARCRQLATVVTVTGDIDADNLSCVADYARRFVLAEKPFILDLSGVSTFAAE
GLSLFYEIDARCAEADVEWSVIGSQPVLQVLRASGTLDDMPVTASVPEALHHFSEGILARRRLLPLLTKTA
>Mature_150_residues
TLTSTSTGSHSAFHYGNPSFDCDRVRMRARCRQLATVVTVTGDIDADNLSCVADYARRFVLAEKPFILDLSGVSTFAAEG
LSLFYEIDARCAEADVEWSVIGSQPVLQVLRASGTLDDMPVTASVPEALHHFSEGILARRRLLPLLTKTA

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16450; Mature: 16319

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTSTSTGSHSAFHYGNPSFDCDRVRMRARCRQLATVVTVTGDIDADNLSCVADYARRF
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
VLAEKPFILDLSGVSTFAAEGLSLFYEIDARCAEADVEWSVIGSQPVLQVLRASGTLDDM
HHCCCCEEEEECCCHHHHHHHHHEEHHHCCHHCCCCCEEEEECCHHHHHHHHHCCCCCCC
PVTASVPEALHHFSEGILARRRLLPLLTKTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLTSTSTGSHSAFHYGNPSFDCDRVRMRARCRQLATVVTVTGDIDADNLSCVADYARRF
CCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH
VLAEKPFILDLSGVSTFAAEGLSLFYEIDARCAEADVEWSVIGSQPVLQVLRASGTLDDM
HHCCCCEEEEECCCHHHHHHHHHEEHHHCCHHCCCCCEEEEECCHHHHHHHHHCCCCCCC
PVTASVPEALHHFSEGILARRRLLPLLTKTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA