Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is ppe63 [H]
Identifier: 108797228
GI number: 108797228
Start: 289529
End: 290662
Strand: Direct
Name: ppe63 [H]
Synonym: Mmcs_0248
Alternate gene names: 108797228
Gene position: 289529-290662 (Clockwise)
Preceding gene: 108797227
Following gene: 108797230
Centisome position: 5.07
GC content: 69.4
Gene sequence:
>1134_bases ATGAGACGGCTTCTCGCATTCGGTTCTGCGCTGACGATCATCGGCGCCGCAGGCGGTTTCGGCTTCGGCAGCGCGTCGGC CGACGAGCCACCGGTCCCGCCGCCGCCCGCCCCGGCCGACGGTCCGCCGCCGCTGGGCACACCGGGTAGGGCCTACGCCC TCGGCGGTGCGCACGTGCTGGGCATCCCCTACGACGAATACATCATGCGCACCGGCTCGGACTGGTTCCCGGGTCTGGAC CGGCAGATCGTCGACTACCCGGCCGGGCAGGTCCAGGGGCACACTCTCGAGCGGCTGTTCCCCGGTATCGGCCGGTTGGA CGACTCCTTCCCCGGACTGGGCATCGACGGTCCCAGCGTCGGTGAGTCGGTCGACGTCGGCACACCGAACGTCATCAACG CCGTCCGGGAGGGTGGTCGCGGTACCGCGATCGGCCTGTCCGAGGGTGCGATGGTGCTCAACGACGTGCAGGCGAAGCTG GCCTACGACCCGGCCGCCCCGCCCCCGGACGAGTTGAGCTTCGCGATGTACGGCGACCCGGTGGCCCGGCACGCCTTCGG CGAGAGCTTCCTGACCCAGAACTTCCCCGTCGGCAGCGTCGTGCCGTCACTCGACTACCGGATCCCGGCGCCGGTGGAGA GCCAGTACGACACCTACCACTTCGTCTCCGCGTACGACAGCATCGCCGACTGGCCGGACCGGCCGGACAACTGGATCTCC GTCGCCAATGCGATCGTGGGCCTGGCGACCGGTCACACCGCGGTCGCCTTCACCGAACCGAGCATGGTGCCGGAGCGCAA CATCCGGACCACCGTCAACTCCCGCGGCGCGAAGACCACCACGTTCATGATCCCCGAGGAGCACCTCCCGCTGGTGCTGC CGTTCAAGTACCTCGGGGTGCCCAAGGACACGCTGATGGAACTCGACTCGGTGCTCAAGCCGTACGTGGACGCGGGCTAC TCCCGCAACGACGATCCGCTGACCGCCCCGATCACCGTGGACCCGGTGAACGGTTACGACCCCGCGGAGGTCACCGCGCC GGCGACGCAGGCCGCCTTCGGCGGCGCCGCCGATCCGGTGTCGCAGCTGTTGTCGGGACTCCAGTACGTCCTGAACAACC AGCCGACCGGGTGA
Upstream 100 bases:
>100_bases TTCGCCCGGCTCGACGGCGGGAAGGGGCAGCATGGGCACCTGGCGGGGTAATGTCGGGCCCGGTGCGGCCGAGCAGGGCG GGAAGGTGCGCGAAACGATT
Downstream 100 bases:
>100_bases TTTCGGCGTGCTTGGTCGCGGTGAGCGCGACTGCGCACGCCGAAATCGCTACAGACCCGCGAAGCCGACGCCGAGCAGCA CGCAGCCGATCACGGCCAGC
Product: PE-PPE-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRRLLAFGSALTIIGAAGGFGFGSASADEPPVPPPPAPADGPPPLGTPGRAYALGGAHVLGIPYDEYIMRTGSDWFPGLD RQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGLGIDGPSVGESVDVGTPNVINAVREGGRGTAIGLSEGAMVLNDVQAKL AYDPAAPPPDELSFAMYGDPVARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSIADWPDRPDNWIS VANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEEHLPLVLPFKYLGVPKDTLMELDSVLKPYVDAGY SRNDDPLTAPITVDPVNGYDPAEVTAPATQAAFGGAADPVSQLLSGLQYVLNNQPTG
Sequences:
>Translated_377_residues MRRLLAFGSALTIIGAAGGFGFGSASADEPPVPPPPAPADGPPPLGTPGRAYALGGAHVLGIPYDEYIMRTGSDWFPGLD RQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGLGIDGPSVGESVDVGTPNVINAVREGGRGTAIGLSEGAMVLNDVQAKL AYDPAAPPPDELSFAMYGDPVARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSIADWPDRPDNWIS VANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEEHLPLVLPFKYLGVPKDTLMELDSVLKPYVDAGY SRNDDPLTAPITVDPVNGYDPAEVTAPATQAAFGGAADPVSQLLSGLQYVLNNQPTG >Mature_377_residues MRRLLAFGSALTIIGAAGGFGFGSASADEPPVPPPPAPADGPPPLGTPGRAYALGGAHVLGIPYDEYIMRTGSDWFPGLD RQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGLGIDGPSVGESVDVGTPNVINAVREGGRGTAIGLSEGAMVLNDVQAKL AYDPAAPPPDELSFAMYGDPVARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSIADWPDRPDNWIS VANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEEHLPLVLPFKYLGVPKDTLMELDSVLKPYVDAGY SRNDDPLTAPITVDPVNGYDPAEVTAPATQAAFGGAADPVSQLLSGLQYVLNNQPTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013228 - InterPro: IPR000030 [H]
Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 39700; Mature: 39700
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLAFGSALTIIGAAGGFGFGSASADEPPVPPPPAPADGPPPLGTPGRAYALGGAHVL CCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEE GIPYDEYIMRTGSDWFPGLDRQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGLGIDGPSV CCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC GESVDVGTPNVINAVREGGRGTAIGLSEGAMVLNDVQAKLAYDPAAPPPDELSFAMYGDP CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCH VARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSIADWPDRPDNWIS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEEHLPLVLPFKYLGV HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCEEECHHHHCC PKDTLMELDSVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAEVTAPATQAAFGGAADPV CHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCCCCCCCCCHHHHHCCCCHHHH SQLLSGLQYVLNNQPTG HHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRLLAFGSALTIIGAAGGFGFGSASADEPPVPPPPAPADGPPPLGTPGRAYALGGAHVL CCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEE GIPYDEYIMRTGSDWFPGLDRQIVDYPAGQVQGHTLERLFPGIGRLDDSFPGLGIDGPSV CCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC GESVDVGTPNVINAVREGGRGTAIGLSEGAMVLNDVQAKLAYDPAAPPPDELSFAMYGDP CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCH VARHAFGESFLTQNFPVGSVVPSLDYRIPAPVESQYDTYHFVSAYDSIADWPDRPDNWIS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VANAIVGLATGHTAVAFTEPSMVPERNIRTTVNSRGAKTTTFMIPEEHLPLVLPFKYLGV HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCEEECHHHHCC PKDTLMELDSVLKPYVDAGYSRNDDPLTAPITVDPVNGYDPAEVTAPATQAAFGGAADPV CHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCCCCCCCCCHHHHHCCCCHHHH SQLLSGLQYVLNNQPTG HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]