| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is adhE [H]
Identifier: 108797177
GI number: 108797177
Start: 215365
End: 216942
Strand: Reverse
Name: adhE [H]
Synonym: Mmcs_0197
Alternate gene names: 108797177
Gene position: 216942-215365 (Counterclockwise)
Preceding gene: 108797178
Following gene: 108797176
Centisome position: 3.8
GC content: 71.04
Gene sequence:
>1578_bases ATGAGCGACATCCCGGCAGGGCGAGCGGAGCGACGGGAGATTGCGGCAGCCGGCCACATGCTCGAGCGCGCCCGGTGGGC GGCACGGGCATATGCCGACTACGACCAGGCCGCCGTTTCGGCCATCACCACCGCGGTCGCCGACGCCGCGTACGGCGCGG CCGACCGGTTCGCCGCCGAGGCCGTCGCCGAGACAGGGATGGGCGTCGTCGCCGACAAGGTGCTCAAGAACCAGGCCTGC TCCCGCGGCATCCTCGACTACTACCGCGAACAGGACTTCGTGTCCCCGCGGGTCGACCCGGACAGCAAGATCGTCGAGAT CCCGCGGCCCGCCGGCGTGGTGCTGGCGCTGACCCCGACGACCAACCCCGTCTCCACCGTGTACTTCAAGGTGCTGCTCG CCCTGATGACGCGCAACGCCGTCGTCGTCGCACCCCATCCGCGGGCCAAGCGGTGCTCGGCCGACGCCGCCCGACTGCTC GCCGACGCCGCGATCGCCGCGGGCGCGCCCGACGGGATCGTCCAGGTGGTCGAGGAACCGTCGATCCCACTGGTCGAGGC GTTGATGGCCGATGAGCGCACCGACGTCATCGTCGCCACCGGCGGCACCGGTGTGGTGCGGGCCGCGTACTCGTCGGGCA CCCCGGCACTCGGTGTCGGCCCGGGCAACGTGCCCGTACTCGTCGACGCCAGCGCCGACATCACCGCGGCGGCCAAGCGC ATCGTCGACAGCAAGGCGTTCGACAACTCGGTGCTGTGCACCAACGAGTCGGTGTTGATCGTCGAGGACTCGGTCGCCGA TGCGCTGCGTTCGGCGATGACCCGCGCCGGTGCGCACATCCTCGACGCCGATGCCACAGAACGCCTGCGCGCCTACATGT TCGCCGACGGTCACCTCAACACCGATGTGGTCGGGCGCGACGCCGCGTGGATCGCCGGACAGGCCGGGATCCGGGTGACA CCGAAGACGCGCGTGCTCGTCGCCCCGTTCGACCACGTGATCAGCGAGGAGATGCTCGCCCACGAGAAGCTCTCGCCGGT GATCGGGATGACGACGGTGCCCGACGCCGCGCGCGGCATCCGCGCCGCCCGCGCGGTGGTGCGCATCGGCGGCGCCGGCC ACTCGGCGGCCATCCACAGCGAAAACGCGTCTGTCATCACCGAATTCGCCACCCAAGTGCCGGTGCTGCGGGTATCGGTC AACGTCGGCAACAGCACCGGCAGCTCGGGCCTGGAGACCAACCTGGCACCGTCGATGACGATCGGCACCGGCTTCGTCGG CCGCAGCTCCATCGGTGAGAACCTGCGCCCCGACAACCTGATGAACTGGGCCCGCATCGCCTACAACAGCGCGCCCGGGG TGGCCATGCCGAGCTTCGCGGGCATCGACCCGTGGCGGTCACCGGCCGGACCGGTGCCCGAATATCCGCGCGCCTCCAAC GATCGCGGCGCACCGCCGGTGTCCCCGTCACGCAGCGCCCCGGCGGCACGCCGCGCGGCCGACCCGAGCATCGAGGCCCT GCGGGCCGAACTGCGGGCGCTGGTCGTCGAAGAGCTCGCACAACTGATCAAGAGGTGA
Upstream 100 bases:
>100_bases AACCGGGTCTCCTGCTCGGCCGCGACCTGTGCGAGGACGTGCTGGACCGGCTGGAGGTCGCGGTGGGCCGGGCGAAGACT GCAGCCAGGAAGGGACGGGC
Downstream 100 bases:
>100_bases CCCGTGGCTGAACTGCGTTCCTTCATCTTCATCGATCGGCTTCAGCCGCAGACGATGTCGTACCTGGGCACCTGGATCAA GGGCGCCCTGCCGCGGGCGA
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH [H]
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MSDIPAGRAERREIAAAGHMLERARWAARAYADYDQAAVSAITTAVADAAYGAADRFAAEAVAETGMGVVADKVLKNQAC SRGILDYYREQDFVSPRVDPDSKIVEIPRPAGVVLALTPTTNPVSTVYFKVLLALMTRNAVVVAPHPRAKRCSADAARLL ADAAIAAGAPDGIVQVVEEPSIPLVEALMADERTDVIVATGGTGVVRAAYSSGTPALGVGPGNVPVLVDASADITAAAKR IVDSKAFDNSVLCTNESVLIVEDSVADALRSAMTRAGAHILDADATERLRAYMFADGHLNTDVVGRDAAWIAGQAGIRVT PKTRVLVAPFDHVISEEMLAHEKLSPVIGMTTVPDAARGIRAARAVVRIGGAGHSAAIHSENASVITEFATQVPVLRVSV NVGNSTGSSGLETNLAPSMTIGTGFVGRSSIGENLRPDNLMNWARIAYNSAPGVAMPSFAGIDPWRSPAGPVPEYPRASN DRGAPPVSPSRSAPAARRAADPSIEALRAELRALVVEELAQLIKR
Sequences:
>Translated_525_residues MSDIPAGRAERREIAAAGHMLERARWAARAYADYDQAAVSAITTAVADAAYGAADRFAAEAVAETGMGVVADKVLKNQAC SRGILDYYREQDFVSPRVDPDSKIVEIPRPAGVVLALTPTTNPVSTVYFKVLLALMTRNAVVVAPHPRAKRCSADAARLL ADAAIAAGAPDGIVQVVEEPSIPLVEALMADERTDVIVATGGTGVVRAAYSSGTPALGVGPGNVPVLVDASADITAAAKR IVDSKAFDNSVLCTNESVLIVEDSVADALRSAMTRAGAHILDADATERLRAYMFADGHLNTDVVGRDAAWIAGQAGIRVT PKTRVLVAPFDHVISEEMLAHEKLSPVIGMTTVPDAARGIRAARAVVRIGGAGHSAAIHSENASVITEFATQVPVLRVSV NVGNSTGSSGLETNLAPSMTIGTGFVGRSSIGENLRPDNLMNWARIAYNSAPGVAMPSFAGIDPWRSPAGPVPEYPRASN DRGAPPVSPSRSAPAARRAADPSIEALRAELRALVVEELAQLIKR >Mature_524_residues SDIPAGRAERREIAAAGHMLERARWAARAYADYDQAAVSAITTAVADAAYGAADRFAAEAVAETGMGVVADKVLKNQACS RGILDYYREQDFVSPRVDPDSKIVEIPRPAGVVLALTPTTNPVSTVYFKVLLALMTRNAVVVAPHPRAKRCSADAARLLA DAAIAAGAPDGIVQVVEEPSIPLVEALMADERTDVIVATGGTGVVRAAYSSGTPALGVGPGNVPVLVDASADITAAAKRI VDSKAFDNSVLCTNESVLIVEDSVADALRSAMTRAGAHILDADATERLRAYMFADGHLNTDVVGRDAAWIAGQAGIRVTP KTRVLVAPFDHVISEEMLAHEKLSPVIGMTTVPDAARGIRAARAVVRIGGAGHSAAIHSENASVITEFATQVPVLRVSVN VGNSTGSSGLETNLAPSMTIGTGFVGRSSIGENLRPDNLMNWARIAYNSAPGVAMPSFAGIDPWRSPAGPVPEYPRASND RGAPPVSPSRSAPAARRAADPSIEALRAELRALVVEELAQLIKR
Specific function: This enzyme has probably two activities:ADH, and ACDH [H]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=440, Percent_Identity=38.6363636363636, Blast_Score=281, Evalue=1e-76, Organism=Escherichia coli, GI1788797, Length=378, Percent_Identity=36.5079365079365, Blast_Score=175, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 54789; Mature: 54657
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIPAGRAERREIAAAGHMLERARWAARAYADYDQAAVSAITTAVADAAYGAADRFAAE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVAETGMGVVADKVLKNQACSRGILDYYREQDFVSPRVDPDSKIVEIPRPAGVVLALTPT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCC TNPVSTVYFKVLLALMTRNAVVVAPHPRAKRCSADAARLLADAAIAAGAPDGIVQVVEEP CCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC SIPLVEALMADERTDVIVATGGTGVVRAAYSSGTPALGVGPGNVPVLVDASADITAAAKR CCHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHH IVDSKAFDNSVLCTNESVLIVEDSVADALRSAMTRAGAHILDADATERLRAYMFADGHLN HHHHHCCCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHEEECCCCC TDVVGRDAAWIAGQAGIRVTPKTRVLVAPFDHVISEEMLAHEKLSPVIGMTTVPDAARGI CCEECCCCCEEECCCCEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RAARAVVRIGGAGHSAAIHSENASVITEFATQVPVLRVSVNVGNSTGSSGLETNLAPSMT HHHHHHHEECCCCCCCEEECCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCEE IGTGFVGRSSIGENLRPDNLMNWARIAYNSAPGVAMPSFAGIDPWRSPAGPVPEYPRASN ECCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRGAPPVSPSRSAPAARRAADPSIEALRAELRALVVEELAQLIKR CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDIPAGRAERREIAAAGHMLERARWAARAYADYDQAAVSAITTAVADAAYGAADRFAAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVAETGMGVVADKVLKNQACSRGILDYYREQDFVSPRVDPDSKIVEIPRPAGVVLALTPT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCC TNPVSTVYFKVLLALMTRNAVVVAPHPRAKRCSADAARLLADAAIAAGAPDGIVQVVEEP CCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC SIPLVEALMADERTDVIVATGGTGVVRAAYSSGTPALGVGPGNVPVLVDASADITAAAKR CCHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHH IVDSKAFDNSVLCTNESVLIVEDSVADALRSAMTRAGAHILDADATERLRAYMFADGHLN HHHHHCCCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHEEECCCCC TDVVGRDAAWIAGQAGIRVTPKTRVLVAPFDHVISEEMLAHEKLSPVIGMTTVPDAARGI CCEECCCCCEEECCCCEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RAARAVVRIGGAGHSAAIHSENASVITEFATQVPVLRVSVNVGNSTGSSGLETNLAPSMT HHHHHHHEECCCCCCCEEECCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCEE IGTGFVGRSSIGENLRPDNLMNWARIAYNSAPGVAMPSFAGIDPWRSPAGPVPEYPRASN ECCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DRGAPPVSPSRSAPAARRAADPSIEALRAELRALVVEELAQLIKR CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226639; 8300540; 11466286 [H]