| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797176
Identifier: 108797176
GI number: 108797176
Start: 214756
End: 215361
Strand: Reverse
Name: 108797176
Synonym: Mmcs_0196
Alternate gene names: NA
Gene position: 215361-214756 (Counterclockwise)
Preceding gene: 108797177
Following gene: 108797175
Centisome position: 3.77
GC content: 67.82
Gene sequence:
>606_bases GTGGCTGAACTGCGTTCCTTCATCTTCATCGATCGGCTTCAGCCGCAGACGATGTCGTACCTGGGCACCTGGATCAAGGG CGCCCTGCCGCGGGCGAACATGGCCGCCCAGATCATCGAGGTGGCCCCGGGGCTGGACATCGAGGGCATCACCGACGTGG CGCTCAAACACGCGGAGGTCAAGGCCGGGATCCTCGTGGTCGAGCGGCAGTTCGGCTATCTGGAGTTCCACGGCGAGACA GGCGCGGTGAAGGCCGCCGCCGACGCCGCGCTCGAATCCCTGCACCAGGAGGCCGATTCGGCGGTGCGGCCGACCATCCT GGCGTCGCGCATCATCTCCAGCATCGACCACCAGCACGCCTTCCTGATCAACCGCAACAAGATCGGCTCGATGGTGCTGG CCGGTGAGTCGCTGTTCGTCCTCGAGGTCGCCCCGGCGTCGTACGCGATCCTGGCGACCAACGAGGCCGAGAAGGCCGCC GACATCAAGGTCGTGGACTTCCGGATGATCGGCGCGACCGGCCGGGTCTACCTGTCGGGCACCGAGGCCGACATCCGCCA GGCCGCCGAGGCGGCTCAGGACGCCCTCGCCCGGAGCACCGTGTGA
Upstream 100 bases:
>100_bases GGCGGCACGCCGCGCGGCCGACCCGAGCATCGAGGCCCTGCGGGCCGAACTGCGGGCGCTGGTCGTCGAAGAGCTCGCAC AACTGATCAAGAGGTGACCC
Downstream 100 bases:
>100_bases GCACTATCGACCGCGCCGAATTACGCGCCCTGGTACGGGAAGTCGTCCGCGAAGCGGCCAAGGACTTCGCCGGAGCGAAC GGTGGCGCCGCACCGAAGGC
Product: microcompartments protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAELRSFIFIDRLQPQTMSYLGTWIKGALPRANMAAQIIEVAPGLDIEGITDVALKHAEVKAGILVVERQFGYLEFHGET GAVKAAADAALESLHQEADSAVRPTILASRIISSIDHQHAFLINRNKIGSMVLAGESLFVLEVAPASYAILATNEAEKAA DIKVVDFRMIGATGRVYLSGTEADIRQAAEAAQDALARSTV
Sequences:
>Translated_201_residues MAELRSFIFIDRLQPQTMSYLGTWIKGALPRANMAAQIIEVAPGLDIEGITDVALKHAEVKAGILVVERQFGYLEFHGET GAVKAAADAALESLHQEADSAVRPTILASRIISSIDHQHAFLINRNKIGSMVLAGESLFVLEVAPASYAILATNEAEKAA DIKVVDFRMIGATGRVYLSGTEADIRQAAEAAQDALARSTV >Mature_200_residues AELRSFIFIDRLQPQTMSYLGTWIKGALPRANMAAQIIEVAPGLDIEGITDVALKHAEVKAGILVVERQFGYLEFHGETG AVKAAADAALESLHQEADSAVRPTILASRIISSIDHQHAFLINRNKIGSMVLAGESLFVLEVAPASYAILATNEAEKAAD IKVVDFRMIGATGRVYLSGTEADIRQAAEAAQDALARSTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21545; Mature: 21414
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELRSFIFIDRLQPQTMSYLGTWIKGALPRANMAAQIIEVAPGLDIEGITDVALKHAEV CCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH KAGILVVERQFGYLEFHGETGAVKAAADAALESLHQEADSAVRPTILASRIISSIDHQHA HEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEE FLINRNKIGSMVLAGESLFVLEVAPASYAILATNEAEKAADIKVVDFRMIGATGRVYLSG EEEECCCCCCEEEECCCEEEEEECCCCEEEEEECCCHHHCCEEEEEEEEECCCCEEEEEC TEADIRQAAEAAQDALARSTV CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AELRSFIFIDRLQPQTMSYLGTWIKGALPRANMAAQIIEVAPGLDIEGITDVALKHAEV CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH KAGILVVERQFGYLEFHGETGAVKAAADAALESLHQEADSAVRPTILASRIISSIDHQHA HEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEE FLINRNKIGSMVLAGESLFVLEVAPASYAILATNEAEKAADIKVVDFRMIGATGRVYLSG EEEECCCCCCEEEECCCEEEEEECCCCEEEEEECCCHHHCCEEEEEEEEECCCCEEEEEC TEADIRQAAEAAQDALARSTV CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA