| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is menE [H]
Identifier: 108763899
GI number: 108763899
Start: 4113225
End: 4114673
Strand: Direct
Name: menE [H]
Synonym: MXAN_3532
Alternate gene names: 108763899
Gene position: 4113225-4114673 (Clockwise)
Preceding gene: 108761657
Following gene: 108763094
Centisome position: 45.0
GC content: 71.22
Gene sequence:
>1449_bases ATGTCGGTCCTGCTGTGTCCCATTCGAGTAGGCGCTCGTCATCACCCCCAGGCAGAGGCCCTGACGTTCGCGGGCCGCTC CTGGTCCTATGAAGCGCTGGATGCGGAAGTCTCCCGATGGGTTGCCGCACTCGAGGCGGAGGGCGTCGGCGCTTCGGACA GGGTGGCGTCGCTCGCGACGAACCACGTCGCCTCCGTGTGCCTCTTCTGGGCGCTGGGCCGGCTGGGCGCGGTGTTGGCG CCGCTCAATGCCCGCCTCACGTCCGTGGAGCTGGCGCCCATGGTGGAGGACATCCAGCCCCGTTTGAGGCTGGCGCTGGG GGCCCTGGCGGAGCGGCTCCCTGGAGCCCGGCCACTCGAGTCCTTCGCGGAGGCCGTCTCCACGGGGGCTTCCACGTGCC AGCCCCTGGAGGCATCGTCGCCCCGGGTTGTGCTCTTCACCAGCGGGACCACGGGCCGGCCCAAGGGCGCGGTCCTCACC GAAGGCAACTTCCGGGCGTCTTCACGAGCGTCGGCGGGCAACCTGGGGGCGCATCCAGCCCCGCGTTGGCTGGGCACATT GCCGCTTTTCCACGTGGGGGGCATCGCCATGCTCACTCGCACTGCCTACGAGGGAGGCTGCCTCGTCCTGCACGAACGCT TCGACGCCGATGCGGCCAACCGGGCCATCGACGGGGAGGGCGTGTCCCACGCGAGCCTCGTGGCTACGACGCTGGAGCGA GTGCTGGAGGCCCGAGGTGACCGGCGCATGCCGGACTCCTTTGCATGGGCGCTGATAGGCGGAGGTCCGGTGCCCGTGCC CCTCCTCGCACGAGCGAGGGCCGCGGGCCTGCGAGCCCTTCAGACGTACGGCCTGACGGAGGCCTGCTCACAAGTCACGA CTGAGCGCCCGGACACTGCGGACGGCCGCACCGCTGGTGTCCCGTTGCTGGGTGTCGAGGTGCGCATCGTCGGCGCAGGG GGCGAAGTCCTCGGTGCTGGGGCGGAGGGCGACATCGAGGTGCGCGCGCCCACGGTGATGGCCGGGTACTGGCAGCGTCC GGAGGCCACCCAGGAGGCGGTTCGCGACGGCTGGCTGCGCACGAAGGACGTCGGTGTGCTGGATGGTGGGGGGCGGCTCA CCGTGCTGTCACGCCGCACGGACCTCATCGTCCGAGGTGGGGAGAACATCTACCCGGCGGAGGTGGAAGCGGTGCTCGTC AACCACCCCGCGGTGCAGGAAGCCTCCGTGGTGGGCTTCCCGGACGACCGCTGGGGCGAACGGCCCGTGGCCTTCGTCGC GCCGCGCCAGGGGCAACCGCACCCCGGGGATGAGGAACTGGCGGCGTGGTGCCGTCAGTCCCTGGCGGGCTTCAAGACGC CCGCGCGTTTCGTGTGGGTGGACGCGCTGCCTCGCAACGCCATGGGGAAGGTCGAGCGCACCGTCCTGAGACGGCACGCC CTCCGCTGA
Upstream 100 bases:
>100_bases GCACCCCGGGGCTCGGACTGAGCTCCCAGTCCCTGGTGTGACGGCTCGGCGCATGGGAGCCCCCGGCTTGGCCTCCGTTG ATGAAGCCCAAGGTGACGGA
Downstream 100 bases:
>100_bases CCCACGGGGGTGGGGCGGGCGCCCTGTCTCAGCACTCCGAGATCGGGTGGCCCCAGGGATTGGTCCGCGGGAACTGCCGC AGGACGGTGCTCAGCCGGCA
Product: O-succinylbenzoate-CoA ligase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MSVLLCPIRVGARHHPQAEALTFAGRSWSYEALDAEVSRWVAALEAEGVGASDRVASLATNHVASVCLFWALGRLGAVLA PLNARLTSVELAPMVEDIQPRLRLALGALAERLPGARPLESFAEAVSTGASTCQPLEASSPRVVLFTSGTTGRPKGAVLT EGNFRASSRASAGNLGAHPAPRWLGTLPLFHVGGIAMLTRTAYEGGCLVLHERFDADAANRAIDGEGVSHASLVATTLER VLEARGDRRMPDSFAWALIGGGPVPVPLLARARAAGLRALQTYGLTEACSQVTTERPDTADGRTAGVPLLGVEVRIVGAG GEVLGAGAEGDIEVRAPTVMAGYWQRPEATQEAVRDGWLRTKDVGVLDGGGRLTVLSRRTDLIVRGGENIYPAEVEAVLV NHPAVQEASVVGFPDDRWGERPVAFVAPRQGQPHPGDEELAAWCRQSLAGFKTPARFVWVDALPRNAMGKVERTVLRRHA LR
Sequences:
>Translated_482_residues MSVLLCPIRVGARHHPQAEALTFAGRSWSYEALDAEVSRWVAALEAEGVGASDRVASLATNHVASVCLFWALGRLGAVLA PLNARLTSVELAPMVEDIQPRLRLALGALAERLPGARPLESFAEAVSTGASTCQPLEASSPRVVLFTSGTTGRPKGAVLT EGNFRASSRASAGNLGAHPAPRWLGTLPLFHVGGIAMLTRTAYEGGCLVLHERFDADAANRAIDGEGVSHASLVATTLER VLEARGDRRMPDSFAWALIGGGPVPVPLLARARAAGLRALQTYGLTEACSQVTTERPDTADGRTAGVPLLGVEVRIVGAG GEVLGAGAEGDIEVRAPTVMAGYWQRPEATQEAVRDGWLRTKDVGVLDGGGRLTVLSRRTDLIVRGGENIYPAEVEAVLV NHPAVQEASVVGFPDDRWGERPVAFVAPRQGQPHPGDEELAAWCRQSLAGFKTPARFVWVDALPRNAMGKVERTVLRRHA LR >Mature_481_residues SVLLCPIRVGARHHPQAEALTFAGRSWSYEALDAEVSRWVAALEAEGVGASDRVASLATNHVASVCLFWALGRLGAVLAP LNARLTSVELAPMVEDIQPRLRLALGALAERLPGARPLESFAEAVSTGASTCQPLEASSPRVVLFTSGTTGRPKGAVLTE GNFRASSRASAGNLGAHPAPRWLGTLPLFHVGGIAMLTRTAYEGGCLVLHERFDADAANRAIDGEGVSHASLVATTLERV LEARGDRRMPDSFAWALIGGGPVPVPLLARARAAGLRALQTYGLTEACSQVTTERPDTADGRTAGVPLLGVEVRIVGAGG EVLGAGAEGDIEVRAPTVMAGYWQRPEATQEAVRDGWLRTKDVGVLDGGGRLTVLSRRTDLIVRGGENIYPAEVEAVLVN HPAVQEASVVGFPDDRWGERPVAFVAPRQGQPHPGDEELAAWCRQSLAGFKTPARFVWVDALPRNAMGKVERTVLRRHAL R
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=539, Percent_Identity=29.1280148423006, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI187761345, Length=482, Percent_Identity=29.8755186721992, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI187761343, Length=482, Percent_Identity=29.8755186721992, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI122937307, Length=421, Percent_Identity=28.2660332541568, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI38505220, Length=408, Percent_Identity=26.2254901960784, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI115511026, Length=361, Percent_Identity=27.9778393351801, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI157311624, Length=392, Percent_Identity=25.765306122449, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI157311622, Length=392, Percent_Identity=25.765306122449, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI58082049, Length=393, Percent_Identity=25.6997455470738, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI42544132, Length=376, Percent_Identity=24.7340425531915, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI13375727, Length=520, Percent_Identity=23.4615384615385, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI253970489, Length=382, Percent_Identity=27.2251308900524, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI8923896, Length=382, Percent_Identity=27.2251308900524, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI145693145, Length=497, Percent_Identity=28.3702213279678, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1788107, Length=345, Percent_Identity=32.463768115942, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI221142682, Length=491, Percent_Identity=27.9022403258656, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788595, Length=354, Percent_Identity=32.7683615819209, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1786810, Length=487, Percent_Identity=27.3100616016427, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1790505, Length=384, Percent_Identity=25.2604166666667, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17558820, Length=477, Percent_Identity=28.7211740041929, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI32563687, Length=465, Percent_Identity=28.6021505376344, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71994690, Length=349, Percent_Identity=30.6590257879656, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71994694, Length=349, Percent_Identity=30.6590257879656, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71994703, Length=349, Percent_Identity=30.6590257879656, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17531443, Length=455, Percent_Identity=25.2747252747253, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17559526, Length=385, Percent_Identity=29.0909090909091, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17538037, Length=508, Percent_Identity=25.7874015748031, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17560308, Length=528, Percent_Identity=25, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17557194, Length=500, Percent_Identity=26.8, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17560140, Length=343, Percent_Identity=25.9475218658892, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71985884, Length=359, Percent_Identity=27.2980501392758, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17564090, Length=329, Percent_Identity=24.9240121580547, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71983001, Length=556, Percent_Identity=24.2805755395683, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71982997, Length=556, Percent_Identity=24.2805755395683, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=339, Percent_Identity=30.6784660766962, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6319264, Length=553, Percent_Identity=24.0506329113924, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323182, Length=398, Percent_Identity=24.3718592964824, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6320852, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24581924, Length=513, Percent_Identity=27.6803118908382, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI21355181, Length=498, Percent_Identity=25.1004016064257, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI18859661, Length=357, Percent_Identity=31.0924369747899, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI20130357, Length=479, Percent_Identity=22.964509394572, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24653035, Length=389, Percent_Identity=24.9357326478149, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24656500, Length=406, Percent_Identity=26.3546798029557, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24648257, Length=347, Percent_Identity=26.5129682997118, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI21356947, Length=180, Percent_Identity=32.7777777777778, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI21358303, Length=225, Percent_Identity=26.6666666666667, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI281365686, Length=348, Percent_Identity=22.9885057471264, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24648253, Length=511, Percent_Identity=23.091976516634, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24648255, Length=511, Percent_Identity=23.2876712328767, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI161076582, Length=397, Percent_Identity=23.6775818639798, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI19922652, Length=359, Percent_Identity=24.7910863509749, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356441, Length=302, Percent_Identity=22.8476821192053, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648260, Length=343, Percent_Identity=24.198250728863, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 51115; Mature: 50984
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLLCPIRVGARHHPQAEALTFAGRSWSYEALDAEVSRWVAALEAEGVGASDRVASLAT CCEEEEEEECCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NHVASVCLFWALGRLGAVLAPLNARLTSVELAPMVEDIQPRLRLALGALAERLPGARPLE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SFAEAVSTGASTCQPLEASSPRVVLFTSGTTGRPKGAVLTEGNFRASSRASAGNLGAHPA HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC PRWLGTLPLFHVGGIAMLTRTAYEGGCLVLHERFDADAANRAIDGEGVSHASLVATTLER CHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHH VLEARGDRRMPDSFAWALIGGGPVPVPLLARARAAGLRALQTYGLTEACSQVTTERPDTA HHHHCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC DGRTAGVPLLGVEVRIVGAGGEVLGAGAEGDIEVRAPTVMAGYWQRPEATQEAVRDGWLR CCCCCCCEEEEEEEEEEECCCCEEECCCCCCEEEECCEEEECCCCCCHHHHHHHHCCCCE TKDVGVLDGGGRLTVLSRRTDLIVRGGENIYPAEVEAVLVNHPAVQEASVVGFPDDRWGE ECCCEEEECCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCC RPVAFVAPRQGQPHPGDEELAAWCRQSLAGFKTPARFVWVDALPRNAMGKVERTVLRRHA CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC LR CC >Mature Secondary Structure SVLLCPIRVGARHHPQAEALTFAGRSWSYEALDAEVSRWVAALEAEGVGASDRVASLAT CEEEEEEECCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NHVASVCLFWALGRLGAVLAPLNARLTSVELAPMVEDIQPRLRLALGALAERLPGARPLE HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SFAEAVSTGASTCQPLEASSPRVVLFTSGTTGRPKGAVLTEGNFRASSRASAGNLGAHPA HHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC PRWLGTLPLFHVGGIAMLTRTAYEGGCLVLHERFDADAANRAIDGEGVSHASLVATTLER CHHHHCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHH VLEARGDRRMPDSFAWALIGGGPVPVPLLARARAAGLRALQTYGLTEACSQVTTERPDTA HHHHCCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC DGRTAGVPLLGVEVRIVGAGGEVLGAGAEGDIEVRAPTVMAGYWQRPEATQEAVRDGWLR CCCCCCCEEEEEEEEEEECCCCEEECCCCCCEEEECCEEEECCCCCCHHHHHHHHCCCCE TKDVGVLDGGGRLTVLSRRTDLIVRGGENIYPAEVEAVLVNHPAVQEASVVGFPDDRWGE ECCCEEEECCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCC RPVAFVAPRQGQPHPGDEELAAWCRQSLAGFKTPARFVWVDALPRNAMGKVERTVLRRHA CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC LR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA