Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is 108563694
Identifier: 108563694
GI number: 108563694
Start: 1316186
End: 1316371
Strand: Reverse
Name: 108563694
Synonym: HPAG1_1269
Alternate gene names: NA
Gene position: 1316371-1316186 (Counterclockwise)
Preceding gene: 108563695
Following gene: 108563693
Centisome position: 82.46
GC content: 40.32
Gene sequence:
>186_bases ATGAATCCTGAAAAAGCCACTCATTGCAAAGAGATTCGTAAGATCTTAAAAGAGGCATTGCATGACAATAAAGATTTGAA TCTTTATTTGGAATCTGGAAGCAAGCACGCCAAGCTGACTAGTGGGGCGAATCATTTGACTATCCCCTCATCGCCAAGCG ACAGAAAAAGCGCAAAAAAACTTTGA
Upstream 100 bases:
>100_bases GCTGGAACTGAAACTCTTGAGCGCTGAAGATTTTGACCAATTCGTGGTGCCTGAAAAGATGATCGGGCCTAAGGCTTAAA ACCTTGGGCGGGCGTGCGAG
Downstream 100 bases:
>100_bases AAAAGAATTAACAGAGTTTATTAAGAAGATAAGAGGAAACAGGATAAGAGCGTGTGAGCAGGAATTTTGATACCGGTTTG GTTGCGTATCAATGACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MNPEKATHCKEIRKILKEALHDNKDLNLYLESGSKHAKLTSGANHLTIPSSPSDRKSAKKL
Sequences:
>Translated_61_residues MNPEKATHCKEIRKILKEALHDNKDLNLYLESGSKHAKLTSGANHLTIPSSPSDRKSAKKL >Mature_61_residues MNPEKATHCKEIRKILKEALHDNKDLNLYLESGSKHAKLTSGANHLTIPSSPSDRKSAKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6795; Mature: 6795
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEKATHCKEIRKILKEALHDNKDLNLYLESGSKHAKLTSGANHLTIPSSPSDRKSAKK CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCEEECCCCCCCCCCCCC L C >Mature Secondary Structure MNPEKATHCKEIRKILKEALHDNKDLNLYLESGSKHAKLTSGANHLTIPSSPSDRKSAKK CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCEEECCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA