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The map label for this gene is recR [H]

Identifier: 108563331

GI number: 108563331

Start: 954472

End: 955053

Strand: Direct

Name: recR [H]

Synonym: HPAG1_0906

Alternate gene names: 108563331

Gene position: 954472-955053 (Clockwise)

Preceding gene: 108563329

Following gene: 108563332

Centisome position: 59.79

GC content: 37.8

Gene sequence:

>582_bases
ATGAATACTTATAAAAACAGCTTGAACCACTTTTTAAATTTAGTGGATTGTTTAGAAAAGATCCCCAATGTGGGTAAAAA
GTCCGCCTTTAAAATAGCGTATCATTTGGGTTTAGAAAACCCTTATCTGGCGCTCAAAATCACGCACGCTTTAGAGAATG
CCCTAGAAAACCTTAAAACATGCACATCTTGTAACGCGCTCAGCGAGAGTGAGGTTTGTGAGATTTGCTCTGATGAGAGC
CGACAAAATTCTCAGCTTTGCATGGTTTTACACCCAAGAGATGTGTTTATTTTAGAAGACTTAAAGGACTTTTTAGGGCG
CTATTATGTGTTAAATTCTATAGAAGAAGTGGATTTTAACGCCCTAGAAAAACGCCTGATTGAAGAAAACATTAAAGAAA
TCATTTTTGCTTTCCCTCCCACTTTGGCTAATGATTCTCTAATGCTTTATATTGAAGACAAGTTACAGCATTTCCACCTC
ACTTTCACTAAAATCGCTCAAGGCGTGCCTACTGGAGTGAATTTTGAAAACATTGACTCTGTTTCGCTCTCAAGGGCGTT
TAATTCAAGGATCAAAGCATGA

Upstream 100 bases:

>100_bases
ACGCTCCATTAGCGCTTTTTCATCTTAAACTCTCTTTTAAAAAACAATAAAAGCCCTTTTAATCTCTTTCAAGTCAAGTT
AAGTTTGATATACTAACGGA

Downstream 100 bases:

>100_bases
ATTTAAATTTTATGCCCCTATTGCATGCTTATAACCATGCGAGCATTGATTTTCATTTCAATTCTAGCGCTAGGGATTTT
TGCGTGCATGAAGTGCCTTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEVCEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHL
TFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA

Sequences:

>Translated_193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEVCEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHL
TFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA
>Mature_193_residues
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKTCTSCNALSESEVCEICSDES
RQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHL
TFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=33.1578947368421, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR [H]

EC number: NA

Molecular weight: Translated: 22004; Mature: 22004

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKT
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCEEEEEHHHHHHHHHHHHHH
CTSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFN
HHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
ALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCH
VSLSRAFNSRIKA
HHHHHHHHHHCCC
>Mature Secondary Structure
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKT
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCEEEEEHHHHHHHHHHHHHH
CTSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFN
HHHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
ALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCH
VSLSRAFNSRIKA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA