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The map label for this gene is 108563329

Identifier: 108563329

GI number: 108563329

Start: 952945

End: 954051

Strand: Direct

Name: 108563329

Synonym: HPAG1_0904

Alternate gene names: NA

Gene position: 952945-954051 (Clockwise)

Preceding gene: 108563328

Following gene: 108563331

Centisome position: 59.69

GC content: 37.4

Gene sequence:

>1107_bases
ATGCAAAAAGCCTTATTACATTCATCATTCTTTTTACCCTTATTATTTTTATCTTTTTGTATCGCTGAAGAAAATGGGGC
GTATGCGAGCGTGGGTTTTGAATATTCCATTAGTCATGCCGTTGAGCATAATAACCCTTTTTTAAATCAAGAACGCATCC
AAATCATTTCTAACGTTCAAAATAAGATCTACAAACTCAATCAAGTCAAAAATGAAATCACAAACATGCCCAACACCTTT
AATTACATCAACAACGCTTTAAAAAACCATGCTAAATTAACCCCTACTGAAAAGCAAGCCGAACAATACTACCTCCAATC
CACCCTTGAAGGGATTGAAAAAATAGTGGCGCTCAGCGGTGGCGTTGCATCTCAACCTAAATTAGTCCAAGCGTTGGAAA
AAATGCAAGAACCCATTACTAACCCTTTAGAATTAGCAGAAAACTTAAAAAATTTAGAATTACAATTCAGCCAATCTCAA
AACCGCATGCTTTCTTCTTTATCTTCTCAAATCGCTCAAATTTCAAATTCCTTAAACGCGCTTGATCCCACCTCTTATTC
TAAAAACGTTTCAAGCATGTATGGGGTGAGTTTGAGCGTGGGGTATAAGCATTTCTTCACCAAGAAAAAAAATCAAGGGT
TGCGCTATTACTTGTTCTATGATTATGGTTACACTAATTTTGGTTTTGTGGGCAATGGCTTTGATGGTTTAGGCAAAATG
AATAACCATCTCTATGGGCTTGGCATAGACTATCTTTTCAATTTCATTGATAATGCAAAAAAACATTCTAGCGTGGGTTT
TTATGCGGGCTTTGCTTTAGCGGGGAGTTCGTGGGTAGGGAGTGGTTTAGGCATGTGGGTGAGCCAAACGGATTTTATCA
ACAATTACTTGATTAATTATCAAGCTAAAATGCACACGAGTTTTTTCCAGATCCCTTTGAATTTTGGGGTTCGTGTGAAT
GTCAATAGGCACAATGGCTTTGAAATGGGCTTGAAAATCCCTTTAGCGGTGAATTCCTTTTATGAAACGCATGGCAAAGG
GCTAAACACTTCCCTCTTTTTCAAACGCCTTGTGGCGTTTAATGTGAGTTATGTTTATAGTTTTTAG

Upstream 100 bases:

>100_bases
ATAAAGATATTAATATTACCGGAAATATTGGTATGCGCTATGCTTTTTAATGGTATCATTAAACTTGTTTTTAACAAGCC
TAACATAGCAGGATCAACCC

Downstream 100 bases:

>100_bases
GGGGGTAGAAAATAAGCACCCCCTTACATGTTTTAGCGTATCGCAATCTTTGAATTTCAAAAACTCTTCAGTTTTTTTGC
CTCAAATGATGGACACTCTC

Product: outer membrane protein HopK

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MQKALLHSSFFLPLLFLSFCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNVQNKIYKLNQVKNEITNMPNTF
NYINNALKNHAKLTPTEKQAEQYYLQSTLEGIEKIVALSGGVASQPKLVQALEKMQEPITNPLELAENLKNLELQFSQSQ
NRMLSSLSSQIAQISNSLNALDPTSYSKNVSSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGKM
NNHLYGLGIDYLFNFIDNAKKHSSVGFYAGFALAGSSWVGSGLGMWVSQTDFINNYLINYQAKMHTSFFQIPLNFGVRVN
VNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAFNVSYVYSF

Sequences:

>Translated_368_residues
MQKALLHSSFFLPLLFLSFCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNVQNKIYKLNQVKNEITNMPNTF
NYINNALKNHAKLTPTEKQAEQYYLQSTLEGIEKIVALSGGVASQPKLVQALEKMQEPITNPLELAENLKNLELQFSQSQ
NRMLSSLSSQIAQISNSLNALDPTSYSKNVSSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGKM
NNHLYGLGIDYLFNFIDNAKKHSSVGFYAGFALAGSSWVGSGLGMWVSQTDFINNYLINYQAKMHTSFFQIPLNFGVRVN
VNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAFNVSYVYSF
>Mature_368_residues
MQKALLHSSFFLPLLFLSFCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNVQNKIYKLNQVKNEITNMPNTF
NYINNALKNHAKLTPTEKQAEQYYLQSTLEGIEKIVALSGGVASQPKLVQALEKMQEPITNPLELAENLKNLELQFSQSQ
NRMLSSLSSQIAQISNSLNALDPTSYSKNVSSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGKM
NNHLYGLGIDYLFNFIDNAKKHSSVGFYAGFALAGSSWVGSGLGMWVSQTDFINNYLINYQAKMHTSFFQIPLNFGVRVN
VNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAFNVSYVYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41551; Mature: 41551

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKALLHSSFFLPLLFLSFCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNVQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEHHHHHHCCCCCCCHHHHHHHHHHH
NKIYKLNQVKNEITNMPNTFNYINNALKNHAKLTPTEKQAEQYYLQSTLEGIEKIVALSG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GVASQPKLVQALEKMQEPITNPLELAENLKNLELQFSQSQNRMLSSLSSQIAQISNSLNA
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
LDPTSYSKNVSSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGKM
CCCCCCCCCHHHHHCCEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
NNHLYGLGIDYLFNFIDNAKKHSSVGFYAGFALAGSSWVGSGLGMWVSQTDFINNYLINY
CCCEEEECHHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHCCCCHHHHHHHHHHHHHHEEE
QAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAF
EHHHCCEEEEEEECCCEEEEEECCCCEEECEEEEEEHHHHHHHCCCCCCHHHHHHHHHHH
NVSYVYSF
HHHHEEEC
>Mature Secondary Structure
MQKALLHSSFFLPLLFLSFCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNVQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEHHHHHHCCCCCCCHHHHHHHHHHH
NKIYKLNQVKNEITNMPNTFNYINNALKNHAKLTPTEKQAEQYYLQSTLEGIEKIVALSG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GVASQPKLVQALEKMQEPITNPLELAENLKNLELQFSQSQNRMLSSLSSQIAQISNSLNA
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
LDPTSYSKNVSSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGKM
CCCCCCCCCHHHHHCCEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
NNHLYGLGIDYLFNFIDNAKKHSSVGFYAGFALAGSSWVGSGLGMWVSQTDFINNYLINY
CCCEEEECHHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHCCCCHHHHHHHHHHHHHHEEE
QAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAF
EHHHCCEEEEEEECCCEEEEEECCCCEEECEEEEEEHHHHHHHCCCCCCHHHHHHHHHHH
NVSYVYSF
HHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA