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The map label for this gene is 108563234

Identifier: 108563234

GI number: 108563234

Start: 844504

End: 844848

Strand: Direct

Name: 108563234

Synonym: HPAG1_0809

Alternate gene names: NA

Gene position: 844504-844848 (Clockwise)

Preceding gene: 108563233

Following gene: 108563235

Centisome position: 52.9

GC content: 34.78

Gene sequence:

>345_bases
ATGCGCTTTTTGAATAACAAACACAGGGCAAAGGGTTTGAAGGCTGAAGAAGAAGCTTGCGAATTTTTAAAAACGCTGGG
TTTTGAAATGGTGGAGAGGAACTTTTTTTCAAAATTTGGCGAAATTGATATTATCGCTTTGAAAAAAGGGGTTTTGCATT
TCATTGAAGTCAAAAGCGGGGAAAATTTTGATCCCATTTATGCGATCACGCCGAGCAAATTAAAAAAGATGATTAAAACG
ATCCGCTGTTATTTGTCTCAAAAAGATCCCAATAGCGATTTTTGCATTGACGCTCTTATTGTGAAAAATGGTAAATTTGA
GCTTTTAGAAAATATCACTTTTTAG

Upstream 100 bases:

>100_bases
CACACACCACCAACGAAAAATCTATGCTGAACGCCCTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAA
ATGATCCGTTTGGAACATTG

Downstream 100 bases:

>100_bases
ATTTTTATCCAAAACCCATGCGTTTTCATTAACATTCTTAAGCTAATATAATTCTCGTTAATCAAAATCATATATTTAGG
AGTAACTAATGAGTCACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRFLNNKHRAKGLKAEEEACEFLKTLGFEMVERNFFSKFGEIDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKT
IRCYLSQKDPNSDFCIDALIVKNGKFELLENITF

Sequences:

>Translated_114_residues
MRFLNNKHRAKGLKAEEEACEFLKTLGFEMVERNFFSKFGEIDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKT
IRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
>Mature_114_residues
MRFLNNKHRAKGLKAEEEACEFLKTLGFEMVERNFFSKFGEIDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKT
IRCYLSQKDPNSDFCIDALIVKNGKFELLENITF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13197; Mature: 13197

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLNNKHRAKGLKAEEEACEFLKTLGFEMVERNFFSKFGEIDIIALKKGVLHFIEVKSG
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHEEEEEECCC
ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
CCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHCCCC
>Mature Secondary Structure
MRFLNNKHRAKGLKAEEEACEFLKTLGFEMVERNFFSKFGEIDIIALKKGVLHFIEVKSG
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHEEEEEECCC
ENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
CCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA