| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488234
Identifier: 103488234
GI number: 103488234
Start: 2906667
End: 2906933
Strand: Reverse
Name: 103488234
Synonym: Sala_2757
Alternate gene names: NA
Gene position: 2906933-2906667 (Counterclockwise)
Preceding gene: 103488236
Following gene: 103488228
Centisome position: 86.9
GC content: 65.54
Gene sequence:
>267_bases ATGATATTGACCCACCGTGATTGCCCCCTGAAGTTCGTCGGCAAGAAGCGTCTCGCAGGACGGGCTGGTTGCCCGGACCA GAGACGCGCCGCTGTCCGGCGGGCTTCAGGAGGCAACCCCTCCGGGGCGGGCCGATTCTGGCCGATTGCCACGTTGCTCG TCGGGCGCGATGTCCCGCATCGCGCCGCTCCTCGCGCCTCGCACTCGGCCAAAATCGCCTCCGTCACGGTGGGTCAATAT CATGTCATCGCGCTCTACACCGGATGA
Upstream 100 bases:
>100_bases CCGTAGCCGGATGAGGATAAGCTTCATGGCGATGGTGAACATCGTCTTCACCATCATTGCCCGAACACGGGGCCGCGGGC GCCAGCTAGAGCGCGATGAC
Downstream 100 bases:
>100_bases GCGGCGATGCGCAGCAGCGCGCCGATGTCGATATGGATTGCCAGTTCGGCGGCGATGTCGTCGAGCGCGGCGTCGACATC GGCGCCATGGTCGCGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRAAPRASHSAKIASVTVGQY HVIALYTG
Sequences:
>Translated_88_residues MILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRAAPRASHSAKIASVTVGQY HVIALYTG >Mature_88_residues MILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRAAPRASHSAKIASVTVGQY HVIALYTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9400; Mature: 9400
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPH CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC RAAPRASHSAKIASVTVGQYHVIALYTG CCCCCCCCCCEEEEEECCCEEEEEEECC >Mature Secondary Structure MILTHRDCPLKFVGKKRLAGRAGCPDQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPH CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC RAAPRASHSAKIASVTVGQYHVIALYTG CCCCCCCCCCEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA