The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487998

Identifier: 103487998

GI number: 103487998

Start: 2655095

End: 2656693

Strand: Reverse

Name: 103487998

Synonym: Sala_2519

Alternate gene names: NA

Gene position: 2656693-2655095 (Counterclockwise)

Preceding gene: 103487999

Following gene: 103487997

Centisome position: 79.42

GC content: 62.1

Gene sequence:

>1599_bases
ATGGCACAGTTTCAAATCCTTTGCCCGCACTCGGAAGCCGAGTGGCGGCCGGTCACGATCGAATTCCTTTTCGCACCCAA
TGGCGACCAGCAATATCTTTGGCCTTCCTTTGACGAAGCCGAAGCCGCGCGGAAACAGCTTCTCCTCCGCGCGCCCGATG
CGCAGCTCCGGATCGCGCTCGCGGACGCCGAGATCGGCGACGTCGACTGGCCGGTTCGCGAGAAATTGCGGTTCGCCGAC
GGCACCTATGCGCCGACGCCCTGGCATGAGGAGCCCTGGTATCAGGAGAAGCACGAAGAGCATTTCTGCCATGTCTCGAC
CGAGCAGGCGGGCAAGATCGCTTTCACCGAGAATGCGGCGAAGGGCGAGGTCGACCGCCAGCTCGTGATGTCGCCGGGCC
GCTACCTTAATCGCTTCTTTTCTGCCCATCTGGACAATGAAGCGATCGAGGGCTGGTGCGCCCGGCTTTCGGTCCAGCTT
GCAGAAGATGCGCTCAAGATCACGCAGGACGCCGACGAAATCGAGGAGGTTTATGTCGGCGGTCCCGGCAGCTGCATGTC
GCACGGCGCGAGCGACTTCGAGAGCTATTGCCACCCGGTGCGCGTCTATGCCGGTCCCGACACGGCGCTCGCCTATATCG
GCGCCCGCGACGATGCCCGCGCGCGCAGCGTGGTGTGGCCCGAACTCAAAATCTACACCAGCATCTATGGCGATGTATCG
CGGCTCAAGCTGCTGCTCGAAAATGCGGGCTATGCGAAGGGCAGCCTCAATGGCGCACGCATCCGGCGGCTCGTCGATGG
CGGCAGCTTCGTCGTTCCCTATATCGATGCGGGCGATGACCTCGCCGACGACGGCGAATATCTCATCATCGGCCATGGTG
AGATCCCGTCCGAGAATACCAACGGCCTGGGGGACCGATGTTGGTACTGCCCGCGGTGCGACCGCGAAACGACGCCGCAT
GAGGAAGTCTATTTCGGCGACGGCTCGTCGGAAGAATGGTGCTATAATTGCTTCACCGATCACACGACCTTCTGCGCGCA
TAATGAGCGCAGCTACAGCGATGCCGAAACCTTCATCCCGGTGCTCGCCGATGGCGATGAGCATGACGTGCTTGACGGTT
ATGTCGAGGCCTTCGGTGCGGTGTACATCGAAGATCGCGGCGAATGGTGGCTCGCGACCTGCTGCCGGAAATGCGATGCC
TCGGGCGAATGGTATCATGCGACTGATCTCACCGAATATCATGGTGAATGGCTTTGTGCGGATTATCTGCCCGATCCTGT
CGACGATGACGATCCATCGCTCGCCAATGCCCATGTCCTCGCTCGCGACTGGTTTCGGTACGAAATGTCGGCGATCGAAC
TCGAGGTCGCCAAATGGCAGGCAGCCGGTGAGCGTGCCCGCGAAGAACGGCTGAGGCACGAACGGGAAGCAGCCGAGCGA
CCTCGCCTCGAAGACTTGCGACGTGGATCTCTTCCGCCGTGCAGCTGTGCCTGCGCGCACGGCTATCCTCCCGACATGCC
GACGCCGGTCGATGGCCTCACCTCCGCCGCCGCAGCGCCTCTGGCAGCGACCGCAACCCCTTGCCAGACAGGAGCCTGA

Upstream 100 bases:

>100_bases
CTGACCCCCGACCCTCGCTAACCCTGCGCCACCCCATCAGCAATGCAGCCCGCGATCGCGCCTCTTCGGGGCATGCGCGC
GGCTGCGCGGAGTCCCATCC

Downstream 100 bases:

>100_bases
TCCATGACCCATGACCTTGCGGGCCGCGCCGGCCTCCTCGAAATCCTGTCCTGGGCACGGCCCCATGACAGCGCGACCGA
ACGCGCCTTCTGCCGCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MAQFQILCPHSEAEWRPVTIEFLFAPNGDQQYLWPSFDEAEAARKQLLLRAPDAQLRIALADAEIGDVDWPVREKLRFAD
GTYAPTPWHEEPWYQEKHEEHFCHVSTEQAGKIAFTENAAKGEVDRQLVMSPGRYLNRFFSAHLDNEAIEGWCARLSVQL
AEDALKITQDADEIEEVYVGGPGSCMSHGASDFESYCHPVRVYAGPDTALAYIGARDDARARSVVWPELKIYTSIYGDVS
RLKLLLENAGYAKGSLNGARIRRLVDGGSFVVPYIDAGDDLADDGEYLIIGHGEIPSENTNGLGDRCWYCPRCDRETTPH
EEVYFGDGSSEEWCYNCFTDHTTFCAHNERSYSDAETFIPVLADGDEHDVLDGYVEAFGAVYIEDRGEWWLATCCRKCDA
SGEWYHATDLTEYHGEWLCADYLPDPVDDDDPSLANAHVLARDWFRYEMSAIELEVAKWQAAGERAREERLRHEREAAER
PRLEDLRRGSLPPCSCACAHGYPPDMPTPVDGLTSAAAAPLAATATPCQTGA

Sequences:

>Translated_532_residues
MAQFQILCPHSEAEWRPVTIEFLFAPNGDQQYLWPSFDEAEAARKQLLLRAPDAQLRIALADAEIGDVDWPVREKLRFAD
GTYAPTPWHEEPWYQEKHEEHFCHVSTEQAGKIAFTENAAKGEVDRQLVMSPGRYLNRFFSAHLDNEAIEGWCARLSVQL
AEDALKITQDADEIEEVYVGGPGSCMSHGASDFESYCHPVRVYAGPDTALAYIGARDDARARSVVWPELKIYTSIYGDVS
RLKLLLENAGYAKGSLNGARIRRLVDGGSFVVPYIDAGDDLADDGEYLIIGHGEIPSENTNGLGDRCWYCPRCDRETTPH
EEVYFGDGSSEEWCYNCFTDHTTFCAHNERSYSDAETFIPVLADGDEHDVLDGYVEAFGAVYIEDRGEWWLATCCRKCDA
SGEWYHATDLTEYHGEWLCADYLPDPVDDDDPSLANAHVLARDWFRYEMSAIELEVAKWQAAGERAREERLRHEREAAER
PRLEDLRRGSLPPCSCACAHGYPPDMPTPVDGLTSAAAAPLAATATPCQTGA
>Mature_531_residues
AQFQILCPHSEAEWRPVTIEFLFAPNGDQQYLWPSFDEAEAARKQLLLRAPDAQLRIALADAEIGDVDWPVREKLRFADG
TYAPTPWHEEPWYQEKHEEHFCHVSTEQAGKIAFTENAAKGEVDRQLVMSPGRYLNRFFSAHLDNEAIEGWCARLSVQLA
EDALKITQDADEIEEVYVGGPGSCMSHGASDFESYCHPVRVYAGPDTALAYIGARDDARARSVVWPELKIYTSIYGDVSR
LKLLLENAGYAKGSLNGARIRRLVDGGSFVVPYIDAGDDLADDGEYLIIGHGEIPSENTNGLGDRCWYCPRCDRETTPHE
EVYFGDGSSEEWCYNCFTDHTTFCAHNERSYSDAETFIPVLADGDEHDVLDGYVEAFGAVYIEDRGEWWLATCCRKCDAS
GEWYHATDLTEYHGEWLCADYLPDPVDDDDPSLANAHVLARDWFRYEMSAIELEVAKWQAAGERAREERLRHEREAAERP
RLEDLRRGSLPPCSCACAHGYPPDMPTPVDGLTSAAAAPLAATATPCQTGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59559; Mature: 59428

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFQILCPHSEAEWRPVTIEFLFAPNGDQQYLWPSFDEAEAARKQLLLRAPDAQLRIAL
CCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEECCCCEEEEEE
ADAEIGDVDWPVREKLRFADGTYAPTPWHEEPWYQEKHEEHFCHVSTEQAGKIAFTENAA
ECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCEEEECCCC
KGEVDRQLVMSPGRYLNRFFSAHLDNEAIEGWCARLSVQLAEDALKITQDADEIEEVYVG
CCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEC
GPGSCMSHGASDFESYCHPVRVYAGPDTALAYIGARDDARARSVVWPELKIYTSIYGDVS
CCCHHHHCCHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCEECCCCEEHHHHHCCHH
RLKLLLENAGYAKGSLNGARIRRLVDGGSFVVPYIDAGDDLADDGEYLIIGHGEIPSENT
HHHHHHHCCCCCCCCCCHHHHHHEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
NGLGDRCWYCPRCDRETTPHEEVYFGDGSSEEWCYNCFTDHTTFCAHNERSYSDAETFIP
CCCCCCCEECCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCHHHEEE
VLADGDEHDVLDGYVEAFGAVYIEDRGEWWLATCCRKCDASGEWYHATDLTEYHGEWLCA
EEECCCCCHHHHHHHHHHCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCEEEE
DYLPDPVDDDDPSLANAHVLARDWFRYEMSAIELEVAKWQAAGERAREERLRHEREAAER
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC
PRLEDLRRGSLPPCSCACAHGYPPDMPTPVDGLTSAAAAPLAATATPCQTGA
CCHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQFQILCPHSEAEWRPVTIEFLFAPNGDQQYLWPSFDEAEAARKQLLLRAPDAQLRIAL
CCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEEECCCCEEEEEE
ADAEIGDVDWPVREKLRFADGTYAPTPWHEEPWYQEKHEEHFCHVSTEQAGKIAFTENAA
ECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCEEEECCCC
KGEVDRQLVMSPGRYLNRFFSAHLDNEAIEGWCARLSVQLAEDALKITQDADEIEEVYVG
CCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEC
GPGSCMSHGASDFESYCHPVRVYAGPDTALAYIGARDDARARSVVWPELKIYTSIYGDVS
CCCHHHHCCHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCEECCCCEEHHHHHCCHH
RLKLLLENAGYAKGSLNGARIRRLVDGGSFVVPYIDAGDDLADDGEYLIIGHGEIPSENT
HHHHHHHCCCCCCCCCCHHHHHHEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
NGLGDRCWYCPRCDRETTPHEEVYFGDGSSEEWCYNCFTDHTTFCAHNERSYSDAETFIP
CCCCCCCEECCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCHHHEEE
VLADGDEHDVLDGYVEAFGAVYIEDRGEWWLATCCRKCDASGEWYHATDLTEYHGEWLCA
EEECCCCCHHHHHHHHHHCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCEEEE
DYLPDPVDDDDPSLANAHVLARDWFRYEMSAIELEVAKWQAAGERAREERLRHEREAAER
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHC
PRLEDLRRGSLPPCSCACAHGYPPDMPTPVDGLTSAAAAPLAATATPCQTGA
CCHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA