Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487997

Identifier: 103487997

GI number: 103487997

Start: 2654126

End: 2655091

Strand: Reverse

Name: 103487997

Synonym: Sala_2518

Alternate gene names: NA

Gene position: 2655091-2654126 (Counterclockwise)

Preceding gene: 103487998

Following gene: 103487996

Centisome position: 79.37

GC content: 65.22

Gene sequence:

>966_bases
ATGACCCATGACCTTGCGGGCCGCGCCGGCCTCCTCGAAATCCTGTCCTGGGCACGGCCCCATGACAGCGCGACCGAACG
CGCCTTCTGCCGCGAATATCTCGACCGGGTTCCCGGCATCCGCGCCGATGGTTTCGGCAACCGAATGCTGGAAATCGGCG
ATCGCCCGCGCACATTGTGGAGCTGCCATGTCGATACGGTCGCGGCCGTCGGCGGGCACCAGGCGGTGGGCGTCGATGAA
TATGGCATCGCGCATCTGTGCGACGGCAAAGCGGGCATGTCGCTCGGCGCCGACGACGGCGCGGGACTGTGGATCATGCT
CGGCATGATCGCGGCCGCGCGTCCCGGCCTCTACCTCTTCCATCGCGGCGAGGAGCAGGGTTGCCTCGGCTCGCGCTGGA
TCGAGCGCCACACGCCCGAACTTCTCGCGGACATCGACGCGGCGATCGCCTTCGACCGCGCGGGGCTTGGCGATGTCATC
ACCCACCAGAGCTATGGCCGGACATGCTCCGATGCCTTCGCATCGAGTCTTGCGGCGGCGCTCAACCGGCAGAATATGGG
GTTCCGCTATGCCCCCGACGATACCGGCGTCTACACCGACACCAATGAATATGCCGGCATCGTTTCCGAATGCACCAATC
TGTCGGTGGGCTATCAGCGTCAGCACGGGCCGCGCGAGACGCTCGATGTCGTCCACTGCGAGCAATTGCTCGCAGCCATG
CTCGAACTCGATGCGTCGCAGCTGGTGATCGAGCGCGATCCTTCCGTCCAGGAAGAGGCCGGTTGGTGGTTCGACCGCGG
GCGCAGGCATGGTGGTGATGATTTCGTCGAAGCCGTCGCCGATCATCCGGCGCTCGCGGCCTGGATGCTCGAGCAATGCG
GGGTCAGCTATGATGACTTCCAGATGGCGCTGTGGGCCGAGGAAATGGACGACGACCGGGGTTATCGTCCGCTCATGCCG
ACCTGA

Upstream 100 bases:

>100_bases
CTATCCTCCCGACATGCCGACGCCGGTCGATGGCCTCACCTCCGCCGCCGCAGCGCCTCTGGCAGCGACCGCAACCCCTT
GCCAGACAGGAGCCTGATCC

Downstream 100 bases:

>100_bases
TACGCGGCATCCGCCGTTATAGCCTGCCGACCGATAGTGTCCGCCATGATCCGATTGGCTTCGACGCCGCCGGTTCCGCA
GGTCCCACCGCCAGACGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTHDLAGRAGLLEILSWARPHDSATERAFCREYLDRVPGIRADGFGNRMLEIGDRPRTLWSCHVDTVAAVGGHQAVGVDE
YGIAHLCDGKAGMSLGADDGAGLWIMLGMIAAARPGLYLFHRGEEQGCLGSRWIERHTPELLADIDAAIAFDRAGLGDVI
THQSYGRTCSDAFASSLAAALNRQNMGFRYAPDDTGVYTDTNEYAGIVSECTNLSVGYQRQHGPRETLDVVHCEQLLAAM
LELDASQLVIERDPSVQEEAGWWFDRGRRHGGDDFVEAVADHPALAAWMLEQCGVSYDDFQMALWAEEMDDDRGYRPLMP
T

Sequences:

>Translated_321_residues
MTHDLAGRAGLLEILSWARPHDSATERAFCREYLDRVPGIRADGFGNRMLEIGDRPRTLWSCHVDTVAAVGGHQAVGVDE
YGIAHLCDGKAGMSLGADDGAGLWIMLGMIAAARPGLYLFHRGEEQGCLGSRWIERHTPELLADIDAAIAFDRAGLGDVI
THQSYGRTCSDAFASSLAAALNRQNMGFRYAPDDTGVYTDTNEYAGIVSECTNLSVGYQRQHGPRETLDVVHCEQLLAAM
LELDASQLVIERDPSVQEEAGWWFDRGRRHGGDDFVEAVADHPALAAWMLEQCGVSYDDFQMALWAEEMDDDRGYRPLMP
T
>Mature_320_residues
THDLAGRAGLLEILSWARPHDSATERAFCREYLDRVPGIRADGFGNRMLEIGDRPRTLWSCHVDTVAAVGGHQAVGVDEY
GIAHLCDGKAGMSLGADDGAGLWIMLGMIAAARPGLYLFHRGEEQGCLGSRWIERHTPELLADIDAAIAFDRAGLGDVIT
HQSYGRTCSDAFASSLAAALNRQNMGFRYAPDDTGVYTDTNEYAGIVSECTNLSVGYQRQHGPRETLDVVHCEQLLAAML
ELDASQLVIERDPSVQEEAGWWFDRGRRHGGDDFVEAVADHPALAAWMLEQCGVSYDDFQMALWAEEMDDDRGYRPLMPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35307; Mature: 35176

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDLAGRAGLLEILSWARPHDSATERAFCREYLDRVPGIRADGFGNRMLEIGDRPRTLW
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEE
SCHVDTVAAVGGHQAVGVDEYGIAHLCDGKAGMSLGADDGAGLWIMLGMIAAARPGLYLF
EECHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
HRGEEQGCLGSRWIERHTPELLADIDAAIAFDRAGLGDVITHQSYGRTCSDAFASSLAAA
ECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
LNRQNMGFRYAPDDTGVYTDTNEYAGIVSECTNLSVGYQRQHGPRETLDVVHCEQLLAAM
HHHCCCCCEECCCCCCCEECCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHH
LELDASQLVIERDPSVQEEAGWWFDRGRRHGGDDFVEAVADHPALAAWMLEQCGVSYDDF
HHCCHHHEEEECCCCCHHHHCCHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHH
QMALWAEEMDDDRGYRPLMPT
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
THDLAGRAGLLEILSWARPHDSATERAFCREYLDRVPGIRADGFGNRMLEIGDRPRTLW
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEE
SCHVDTVAAVGGHQAVGVDEYGIAHLCDGKAGMSLGADDGAGLWIMLGMIAAARPGLYLF
EECHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
HRGEEQGCLGSRWIERHTPELLADIDAAIAFDRAGLGDVITHQSYGRTCSDAFASSLAAA
ECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
LNRQNMGFRYAPDDTGVYTDTNEYAGIVSECTNLSVGYQRQHGPRETLDVVHCEQLLAAM
HHHCCCCCEECCCCCCCEECCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHH
LELDASQLVIERDPSVQEEAGWWFDRGRRHGGDDFVEAVADHPALAAWMLEQCGVSYDDF
HHCCHHHEEEECCCCCHHHHCCHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHH
QMALWAEEMDDDRGYRPLMPT
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA