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The map label for this gene is yubM [H]

Identifier: 103487999

GI number: 103487999

Start: 2656915

End: 2658999

Strand: Reverse

Name: yubM [H]

Synonym: Sala_2520

Alternate gene names: 103487999

Gene position: 2658999-2656915 (Counterclockwise)

Preceding gene: 103488000

Following gene: 103487998

Centisome position: 79.49

GC content: 67.34

Gene sequence:

>2085_bases
ATGGCCAAATCGCTTCCGAAAATCACCCTCGCCCCGTCGCGCGACATTCCCCTCGACCGCCTGCGCCTGTCGCAGGCCAA
TGTGCGGCGCGTGAAGGCGGGGGTATCGATCGACACGCTGGCGGCCGACATCGCGCGCCGCGGATTGCTCCAGAGCCTCA
ACGTGCGGCCGCTGCTCGATGGCGAGGGGCAGGAAACGGGGGAATTCGAAATTCCAGCCGGAGGCCGGCGCTTCCGCGCG
CTCGAACTGCTGGTGAAGCAGAAAAGGCTCGCGAAGGACGCGCCGATCCCCTGTGTCGTGGGCGGTGCGGCCAATGACAT
ACTCGCCGAAGAGGACAGCCTCGCCGAAAACAGCTTTCGCGAGGCACTGCATCCGCTCGACGAATTTCGCGCGATGCAGG
CGATGGTCGAGAAGGACGCCGGCATCGAGGCAATCGCCGCGCATTTTCACACCACGCCCGCCGCGGTGCGGCAGCGGTTG
AAGCTCGCCGGCGTCTCGCCGAAGCTGCTCGAGCTCTATGCCGACGAGGCGATGACGCTCGATCAGCTCATGGCCTTCAC
CATCGCCGAGGACCATACGCGGCAAGAAGAGGTCTGGGACCAGCTCGAACATAGCTTCAACAAGTCGGCGACCTGGATCC
GCCAGAAGCTCACCGAGAACAGCGTTCGCGCGGGTGACAAAAGGGCGCGCTTCGTCGGTCTCGACACCTATCTCGAAGCG
GGCGGCAGCATCGCGCGCGACCTGTTCGAATCCGATGGCGGCGGCTGGCTCACCGACCCCGCACTTCTCGATCGGCTTGT
CGATGCCAAGCTGAAGGCCGAGGGCGCGCGCATCCTCGCCGAGGGCTGGAAATGGGTGACGACCGCGATCGACCTGCCGT
GGGACGCAACGCGCGGGTATCGCGAGATCGACCGCGAAGAGGTCGCGATGACCGAAGCCGAAGCGACGCGCGTCGCCGAG
CTTGAAGCCGAAGGCGAGGAACTCGGCGATGAATGGGCCGATGCGCACGACGTGCCCGACGAGGTGCATGCGCGGATCGA
GGCGATCGATGCCGAACTCGGTGCTTTGGTCGACCGGCCGCTGATCTTCGATCCCGCGGACATGGCGGTGGCGGGCGCAT
TCGTCTCGCTCGACCGCGATGGGTCGGTGCGCGTCGAGCGCGGCTTCGTGAAGCCCGAGGATCAACTGCGTGATGGACTC
GGCAGTGACAGCGCGTCGGAGCCGGGCGATACGGCGCGCTCCACTGGCCGCGGCGACGGCGAACCGAAGAAGGCGCAGGA
TGACGCCGAAGGAGCTGAGGAACCGGGTGCGCTGCGCCCGCTCCCCGACCGTCTCGTCTCGGACCTCACGGCTTGGCGCA
CCCTCGCGCTGCAGGACAGGGTCGCGCAAGACCCGGCGCTCGCCTTCGTCGCCGTTCTCCACGTCCTCGTGCTGGGCTGC
TTCTACAGCTTCAGCCGCGAGAGCTGCGTCCAGATCGCGGCGAATCGCGTCTCCTTTTCCAATGCCCCTGCCGGTTTGCG
CGATTGCGCGCCCGCGCAGGCGATCGACGCGCGCTCGGGGGCATGGAAGGCGCGGCTGCCGCAGTCGGATAAGGAAGTGT
GGAGCTTTCTGCTCACCCTCGATGGGGAGGAGCAGTCGCAGCTCCTGGCGCATTGCGGCTCGCTCTGCGTCAACGCCCAG
GCCGAGGTCGTTCCCAAATATGACAATGGCCGCATCTCGGCGCATGGCGTCGAGCGCCGGATCGCCCACAGCCATGTCCT
CGCGCTGGCCGCGGGGCTCGATGTGCATGGCGCGGGGTGGCGGCCGACCGCGGCAGGCTATTTCAGCGGTGTGACCAAGC
CGCAGATCCTCGCCGATGTCGCCGAGGCGCGCGGCGACGAAGCTGCCCGCATGATCGGCCATCTCAAGAAAGCCGATATG
GCCCGCGAGGCCGAACGGCTGGTCGAAGAAACGACCTGGCTCCCGGCGCCGATGCGAACGCCGGGTCTGGACGACATCGA
TCCGGACGGCGGTGAAATGGCGGTACCCGCCGATGCCGACGAGGGCGATCCCTGCGACGCCGAGCTGCCCGTCGCGGCGG
AGTGA

Upstream 100 bases:

>100_bases
CCGGTGGCGGCCCCGTTCGAGGAAGAGGGAAGCCGGGGCTTCGTGACGGGTTTCAGGAGCCGGGAGAGTGTCTCGCGGCG
GCCCGTCATGGAGAAGGCCC

Downstream 100 bases:

>100_bases
GCCATCCGGGCGGGGGCGCATGCCCCCGCCGGATCTTCTTCACGGCGCAGCGGTGCCCGGGAAAGTCGGCCTTTGACGGC
TTGAGGCGACACGAGGCCAG

Product: ParB-like nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MAKSLPKITLAPSRDIPLDRLRLSQANVRRVKAGVSIDTLAADIARRGLLQSLNVRPLLDGEGQETGEFEIPAGGRRFRA
LELLVKQKRLAKDAPIPCVVGGAANDILAEEDSLAENSFREALHPLDEFRAMQAMVEKDAGIEAIAAHFHTTPAAVRQRL
KLAGVSPKLLELYADEAMTLDQLMAFTIAEDHTRQEEVWDQLEHSFNKSATWIRQKLTENSVRAGDKRARFVGLDTYLEA
GGSIARDLFESDGGGWLTDPALLDRLVDAKLKAEGARILAEGWKWVTTAIDLPWDATRGYREIDREEVAMTEAEATRVAE
LEAEGEELGDEWADAHDVPDEVHARIEAIDAELGALVDRPLIFDPADMAVAGAFVSLDRDGSVRVERGFVKPEDQLRDGL
GSDSASEPGDTARSTGRGDGEPKKAQDDAEGAEEPGALRPLPDRLVSDLTAWRTLALQDRVAQDPALAFVAVLHVLVLGC
FYSFSRESCVQIAANRVSFSNAPAGLRDCAPAQAIDARSGAWKARLPQSDKEVWSFLLTLDGEEQSQLLAHCGSLCVNAQ
AEVVPKYDNGRISAHGVERRIAHSHVLALAAGLDVHGAGWRPTAAGYFSGVTKPQILADVAEARGDEAARMIGHLKKADM
AREAERLVEETTWLPAPMRTPGLDDIDPDGGEMAVPADADEGDPCDAELPVAAE

Sequences:

>Translated_694_residues
MAKSLPKITLAPSRDIPLDRLRLSQANVRRVKAGVSIDTLAADIARRGLLQSLNVRPLLDGEGQETGEFEIPAGGRRFRA
LELLVKQKRLAKDAPIPCVVGGAANDILAEEDSLAENSFREALHPLDEFRAMQAMVEKDAGIEAIAAHFHTTPAAVRQRL
KLAGVSPKLLELYADEAMTLDQLMAFTIAEDHTRQEEVWDQLEHSFNKSATWIRQKLTENSVRAGDKRARFVGLDTYLEA
GGSIARDLFESDGGGWLTDPALLDRLVDAKLKAEGARILAEGWKWVTTAIDLPWDATRGYREIDREEVAMTEAEATRVAE
LEAEGEELGDEWADAHDVPDEVHARIEAIDAELGALVDRPLIFDPADMAVAGAFVSLDRDGSVRVERGFVKPEDQLRDGL
GSDSASEPGDTARSTGRGDGEPKKAQDDAEGAEEPGALRPLPDRLVSDLTAWRTLALQDRVAQDPALAFVAVLHVLVLGC
FYSFSRESCVQIAANRVSFSNAPAGLRDCAPAQAIDARSGAWKARLPQSDKEVWSFLLTLDGEEQSQLLAHCGSLCVNAQ
AEVVPKYDNGRISAHGVERRIAHSHVLALAAGLDVHGAGWRPTAAGYFSGVTKPQILADVAEARGDEAARMIGHLKKADM
AREAERLVEETTWLPAPMRTPGLDDIDPDGGEMAVPADADEGDPCDAELPVAAE
>Mature_693_residues
AKSLPKITLAPSRDIPLDRLRLSQANVRRVKAGVSIDTLAADIARRGLLQSLNVRPLLDGEGQETGEFEIPAGGRRFRAL
ELLVKQKRLAKDAPIPCVVGGAANDILAEEDSLAENSFREALHPLDEFRAMQAMVEKDAGIEAIAAHFHTTPAAVRQRLK
LAGVSPKLLELYADEAMTLDQLMAFTIAEDHTRQEEVWDQLEHSFNKSATWIRQKLTENSVRAGDKRARFVGLDTYLEAG
GSIARDLFESDGGGWLTDPALLDRLVDAKLKAEGARILAEGWKWVTTAIDLPWDATRGYREIDREEVAMTEAEATRVAEL
EAEGEELGDEWADAHDVPDEVHARIEAIDAELGALVDRPLIFDPADMAVAGAFVSLDRDGSVRVERGFVKPEDQLRDGLG
SDSASEPGDTARSTGRGDGEPKKAQDDAEGAEEPGALRPLPDRLVSDLTAWRTLALQDRVAQDPALAFVAVLHVLVLGCF
YSFSRESCVQIAANRVSFSNAPAGLRDCAPAQAIDARSGAWKARLPQSDKEVWSFLLTLDGEEQSQLLAHCGSLCVNAQA
EVVPKYDNGRISAHGVERRIAHSHVLALAAGLDVHGAGWRPTAAGYFSGVTKPQILADVAEARGDEAARMIGHLKKADMA
REAERLVEETTWLPAPMRTPGLDDIDPDGGEMAVPADADEGDPCDAELPVAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 75160; Mature: 75029

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSLPKITLAPSRDIPLDRLRLSQANVRRVKAGVSIDTLAADIARRGLLQSLNVRPLLD
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEC
GEGQETGEFEIPAGGRRFRALELLVKQKRLAKDAPIPCVVGGAANDILAEEDSLAENSFR
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHCCCHHHHHHHHH
EALHPLDEFRAMQAMVEKDAGIEAIAAHFHTTPAAVRQRLKLAGVSPKLLELYADEAMTL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DQLMAFTIAEDHTRQEEVWDQLEHSFNKSATWIRQKLTENSVRAGDKRARFVGLDTYLEA
HHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHC
GGSIARDLFESDGGGWLTDPALLDRLVDAKLKAEGARILAEGWKWVTTAIDLPWDATRGY
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCCCCCCH
REIDREEVAMTEAEATRVAELEAEGEELGDEWADAHDVPDEVHARIEAIDAELGALVDRP
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
LIFDPADMAVAGAFVSLDRDGSVRVERGFVKPEDQLRDGLGSDSASEPGDTARSTGRGDG
CEECCHHHHHHHHHEEECCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCC
EPKKAQDDAEGAEEPGALRPLPDRLVSDLTAWRTLALQDRVAQDPALAFVAVLHVLVLGC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FYSFSRESCVQIAANRVSFSNAPAGLRDCAPAQAIDARSGAWKARLPQSDKEVWSFLLTL
HHHHCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
DGEEQSQLLAHCGSLCVNAQAEVVPKYDNGRISAHGVERRIAHSHVLALAAGLDVHGAGW
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
RPTAAGYFSGVTKPQILADVAEARGDEAARMIGHLKKADMAREAERLVEETTWLPAPMRT
CCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGLDDIDPDGGEMAVPADADEGDPCDAELPVAAE
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKSLPKITLAPSRDIPLDRLRLSQANVRRVKAGVSIDTLAADIARRGLLQSLNVRPLLD
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEC
GEGQETGEFEIPAGGRRFRALELLVKQKRLAKDAPIPCVVGGAANDILAEEDSLAENSFR
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHCCCHHHHHHHHH
EALHPLDEFRAMQAMVEKDAGIEAIAAHFHTTPAAVRQRLKLAGVSPKLLELYADEAMTL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DQLMAFTIAEDHTRQEEVWDQLEHSFNKSATWIRQKLTENSVRAGDKRARFVGLDTYLEA
HHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHC
GGSIARDLFESDGGGWLTDPALLDRLVDAKLKAEGARILAEGWKWVTTAIDLPWDATRGY
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCCCCCCH
REIDREEVAMTEAEATRVAELEAEGEELGDEWADAHDVPDEVHARIEAIDAELGALVDRP
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
LIFDPADMAVAGAFVSLDRDGSVRVERGFVKPEDQLRDGLGSDSASEPGDTARSTGRGDG
CEECCHHHHHHHHHEEECCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCC
EPKKAQDDAEGAEEPGALRPLPDRLVSDLTAWRTLALQDRVAQDPALAFVAVLHVLVLGC
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FYSFSRESCVQIAANRVSFSNAPAGLRDCAPAQAIDARSGAWKARLPQSDKEVWSFLLTL
HHHHCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
DGEEQSQLLAHCGSLCVNAQAEVVPKYDNGRISAHGVERRIAHSHVLALAAGLDVHGAGW
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
RPTAAGYFSGVTKPQILADVAEARGDEAARMIGHLKKADMAREAERLVEETTWLPAPMRT
CCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PGLDDIDPDGGEMAVPADADEGDPCDAELPVAAE
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]