The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103487985

Identifier: 103487985

GI number: 103487985

Start: 2642893

End: 2644206

Strand: Reverse

Name: 103487985

Synonym: Sala_2506

Alternate gene names: NA

Gene position: 2644206-2642893 (Counterclockwise)

Preceding gene: 103487986

Following gene: 103487984

Centisome position: 79.05

GC content: 69.94

Gene sequence:

>1314_bases
GTGACGCGGGGTTATGCCGGCCGGCGGAGCCTGCTGAAGGCAGGGCTTGCGGCGCCGATCGCTTTTCAGGCTGCTCCCGC
CTTCGCCGCTGGGGGCGATGATGCCATATTCGCGGCCGAACGGCTTTTCGCCGATGTGAAGGCCTACGCCGAAGCGGGCA
ATAAGCAGTCGGGCGGGGCGGGCGATCGCTGGGCCGCCGACTGGGCTGCGCGGCGGCTTGCTGCGGCGGGCTTTGCGGTC
GAGCGCCAGTCGTTCGACGTGCCCTGGTTCGAAGCGGCGACATGCGAATTGGCGCTCGGCGATCGGAAAATCCCCCTGAT
GGCGCAGCCGCTCGCCGTGCCGACGGGCGTTGGCGGGATCGGTGCGCCGCTGCGGCTTGCGGAGGTCAGCGATCGGCTCG
ATGGCGCGATCGCGGTGGTGCGGCTGCCGTATCGCCGCTGGTCGAGCCTGCTCGACCGGGCGGTGCGCGATCCGCTGGCC
GATGCGCTGGCGCGGGGCGCGGCCGCGGTCATCCTTGTGACCACAGGGCCCACCGGCGAGGCGCTGCTCCTCAATGCGCC
GGCCGATGCGCCGCTGTCGGACAATCCGTTGGCGCTGCTGGCGCCGCGCCTTGCGGCGCCCGTCATCGAAGCGGCGCGGC
AGGGGCAGCCGGCGATGCTGGTGCTGCGCGGGAAGGGCGGTTCGCGCGTCGCGGAGAATGTCGTGGCGCGGCGCGTGCGC
AAGGGGCGCCGCTGGCTCGTGGTCTCGACCCCGCGCTCGGGCTGGACCGATTGCGCGGGCGAACGCGGGCCGGGTTTCGC
GATCTGGCTCGCGCTCGCCGAATGGATGCCGCGCGCCTTCCCCGATCATAGCCTGCTCTTCGTCTGCAACAGCGGGCATG
AATATGAAAATCTGGGTGCCAGCCATATCGTCGAAAAGGTCGGGCCGCCGCCTGCCGACACCGATCTCTGGCTGCATCTC
GGCGCCAATGTCGCGACGCGCGACTATCAGGACATGCCCGGGCGCCTGTTGCCGTTGCCGAGCGCCGATCCCTTCCGCTT
CCTGATGACCTCGGCCGCCTTTGTCGATCGCGCCCGGTCGGATTTCAGGGGGTTGCCGGGACTGGAGATGGCTTATCCCT
CGACCGAAGGGGTCGCGGGCGAACTCTCCGAAGTGGTCAAGGCCGGCTATCCGCATCATGCCGGAATTTTCGGCGCGCAC
CGCCATCATCACGCGCCGACCGACAATCTTTCGGTCGTCGCGCCCGCGCCGCTTGCCGCTACGGCGCAAGCGGTTCGCGA
CTTCCTCACCGCCATCATTCCCGTCCGCCGCTGA

Upstream 100 bases:

>100_bases
ACCTGATTGCCACATCGCAACAGAATTTCGCCGAGGCGCTGGCGGAATATAAGGCACGGCGGACCAAGGCAAAGCCTGGC
CGTCGCCGCGCCCGCGCGTC

Downstream 100 bases:

>100_bases
CCGGCGTCGCCGCGAGGGCGATGTTTCCGGCTTGACTCGCGTCGCCATATGCACAAAATTATCGATAATAATTGCAATAA
CGACATGGGAGGGATTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTRGYAGRRSLLKAGLAAPIAFQAAPAFAAGGDDAIFAAERLFADVKAYAEAGNKQSGGAGDRWAADWAARRLAAAGFAV
ERQSFDVPWFEAATCELALGDRKIPLMAQPLAVPTGVGGIGAPLRLAEVSDRLDGAIAVVRLPYRRWSSLLDRAVRDPLA
DALARGAAAVILVTTGPTGEALLLNAPADAPLSDNPLALLAPRLAAPVIEAARQGQPAMLVLRGKGGSRVAENVVARRVR
KGRRWLVVSTPRSGWTDCAGERGPGFAIWLALAEWMPRAFPDHSLLFVCNSGHEYENLGASHIVEKVGPPPADTDLWLHL
GANVATRDYQDMPGRLLPLPSADPFRFLMTSAAFVDRARSDFRGLPGLEMAYPSTEGVAGELSEVVKAGYPHHAGIFGAH
RHHHAPTDNLSVVAPAPLAATAQAVRDFLTAIIPVRR

Sequences:

>Translated_437_residues
MTRGYAGRRSLLKAGLAAPIAFQAAPAFAAGGDDAIFAAERLFADVKAYAEAGNKQSGGAGDRWAADWAARRLAAAGFAV
ERQSFDVPWFEAATCELALGDRKIPLMAQPLAVPTGVGGIGAPLRLAEVSDRLDGAIAVVRLPYRRWSSLLDRAVRDPLA
DALARGAAAVILVTTGPTGEALLLNAPADAPLSDNPLALLAPRLAAPVIEAARQGQPAMLVLRGKGGSRVAENVVARRVR
KGRRWLVVSTPRSGWTDCAGERGPGFAIWLALAEWMPRAFPDHSLLFVCNSGHEYENLGASHIVEKVGPPPADTDLWLHL
GANVATRDYQDMPGRLLPLPSADPFRFLMTSAAFVDRARSDFRGLPGLEMAYPSTEGVAGELSEVVKAGYPHHAGIFGAH
RHHHAPTDNLSVVAPAPLAATAQAVRDFLTAIIPVRR
>Mature_436_residues
TRGYAGRRSLLKAGLAAPIAFQAAPAFAAGGDDAIFAAERLFADVKAYAEAGNKQSGGAGDRWAADWAARRLAAAGFAVE
RQSFDVPWFEAATCELALGDRKIPLMAQPLAVPTGVGGIGAPLRLAEVSDRLDGAIAVVRLPYRRWSSLLDRAVRDPLAD
ALARGAAAVILVTTGPTGEALLLNAPADAPLSDNPLALLAPRLAAPVIEAARQGQPAMLVLRGKGGSRVAENVVARRVRK
GRRWLVVSTPRSGWTDCAGERGPGFAIWLALAEWMPRAFPDHSLLFVCNSGHEYENLGASHIVEKVGPPPADTDLWLHLG
ANVATRDYQDMPGRLLPLPSADPFRFLMTSAAFVDRARSDFRGLPGLEMAYPSTEGVAGELSEVVKAGYPHHAGIFGAHR
HHHAPTDNLSVVAPAPLAATAQAVRDFLTAIIPVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46308; Mature: 46177

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGYAGRRSLLKAGLAAPIAFQAAPAFAAGGDDAIFAAERLFADVKAYAEAGNKQSGGA
CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
GDRWAADWAARRLAAAGFAVERQSFDVPWFEAATCELALGDRKIPLMAQPLAVPTGVGGI
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCC
GAPLRLAEVSDRLDGAIAVVRLPYRRWSSLLDRAVRDPLADALARGAAAVILVTTGPTGE
CCCEEHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
ALLLNAPADAPLSDNPLALLAPRLAAPVIEAARQGQPAMLVLRGKGGSRVAENVVARRVR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
KGRRWLVVSTPRSGWTDCAGERGPGFAIWLALAEWMPRAFPDHSLLFVCNSGHEYENLGA
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCH
SHIVEKVGPPPADTDLWLHLGANVATRDYQDMPGRLLPLPSADPFRFLMTSAAFVDRARS
HHHHHHCCCCCCCCCEEEEECCCCCCCCHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
DFRGLPGLEMAYPSTEGVAGELSEVVKAGYPHHAGIFGAHRHHHAPTDNLSVVAPAPLAA
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH
TAQAVRDFLTAIIPVRR
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRGYAGRRSLLKAGLAAPIAFQAAPAFAAGGDDAIFAAERLFADVKAYAEAGNKQSGGA
CCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
GDRWAADWAARRLAAAGFAVERQSFDVPWFEAATCELALGDRKIPLMAQPLAVPTGVGGI
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCC
GAPLRLAEVSDRLDGAIAVVRLPYRRWSSLLDRAVRDPLADALARGAAAVILVTTGPTGE
CCCEEHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
ALLLNAPADAPLSDNPLALLAPRLAAPVIEAARQGQPAMLVLRGKGGSRVAENVVARRVR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
KGRRWLVVSTPRSGWTDCAGERGPGFAIWLALAEWMPRAFPDHSLLFVCNSGHEYENLGA
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCH
SHIVEKVGPPPADTDLWLHLGANVATRDYQDMPGRLLPLPSADPFRFLMTSAAFVDRARS
HHHHHHCCCCCCCCCEEEEECCCCCCCCHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
DFRGLPGLEMAYPSTEGVAGELSEVVKAGYPHHAGIFGAHRHHHAPTDNLSVVAPAPLAA
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHH
TAQAVRDFLTAIIPVRR
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA