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The map label for this gene is ybjT [C]

Identifier: 103487617

GI number: 103487617

Start: 2239561

End: 2240499

Strand: Direct

Name: ybjT [C]

Synonym: Sala_2136

Alternate gene names: 103487617

Gene position: 2239561-2240499 (Clockwise)

Preceding gene: 103487615

Following gene: 103487618

Centisome position: 66.95

GC content: 70.5

Gene sequence:

>939_bases
ATGCAGACTTTCGACGGGCAATTGATCACGGTGCTGGGCGGCGGCGGCTTCCTCGGCCGCTATGTCGTGCAACGGTTGCT
GGCGCGCGGCGCGCGCGTTCGTATTGCACAGCGCGACCCGCGCGCGGCGACCTTCCTGAAGCCGCTCGGCGGGCTTGGCC
AGACGCAGTTCGTCCACGCCGACGTCCGTGACGCGGCGAGCGTGGCGCGCGCGGTGCAGGGCAGCGACGCGGTGATCAAC
CTGGTCGGCGCGTTCGACGATATGCGCGCGGTGCAGGCCGATGGCGCGGGACATGTCGCGACGACGGCGAAAGCGGCGGG
CGCGCGCGCGCTCGTCCATGTCTCGGCGATCGGCGCCGACCGCGACAGCCCTTCGGCCTATGGCCGCAGCAAGGGCGACG
GCGAAGCCGCGGTGCGCGCGGCCTTTACCGGGGCCGCCATCCTGCGTCCCTCGATCATCTTTGGCCGCGAGGACCGGTTC
ATCAATCGCTTTGCCGGCATGATGCGCCTCGCGCCGGTCATGCCGGTGATCGCGCCGCAAGCGAAGTTCCAGCCCGTCTA
TGTCGGCGATGTCGCCGATGCGGTCGTCGCCGCGCTGGCCGACACGGCCACCGGCAGGCTGTTCGAACTCGGTGGGCCGC
AGGTGCTGACGATGCGCGAACTGCTCCGCTGGATCGCCGATGCAACCGGACGGTCGCCGCTGTTCATCGACGTGCCCGAT
TTTCTTGCCTCGGCGCTCGCGACCGGATTCGGCTGGGCGCCCGGTGCGCCGATCACCAGAGACCAGTGGCTGATGCTGCA
AAGCGACAATGTCGTGGCGAGCGGCGCCGCGGGCCTCGCCGAGCTTGGCATCACGCCCACCCCGCTCGCGGCGGTCGCCG
ACGGCTGGCTGGTGCAATATCGCCGCCACGGCCGGTTCACGGTCGAAACCCCCGCCTGA

Upstream 100 bases:

>100_bases
CAAACTGGCCTTCTCCCTTGCCCCTCCCTTCGCTTCGCGGCATGGGAAAGCCGTTCGGCGCCCGTGCGCGCCCCTTGAAG
AGAATCACACAGGCGGACCC

Downstream 100 bases:

>100_bases
CACCATCCCGGCCCCGGTGGTCGCGTGGTGATTGCCGGGGCGCAGCCCAGGACATTTCATGCACGACCTTGCCACCATCA
TCCTGCTCGGCATCATCGAG

Product: 3-beta hydroxysteroid dehydrogenase/isomerase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MQTFDGQLITVLGGGGFLGRYVVQRLLARGARVRIAQRDPRAATFLKPLGGLGQTQFVHADVRDAASVARAVQGSDAVIN
LVGAFDDMRAVQADGAGHVATTAKAAGARALVHVSAIGADRDSPSAYGRSKGDGEAAVRAAFTGAAILRPSIIFGREDRF
INRFAGMMRLAPVMPVIAPQAKFQPVYVGDVADAVVAALADTATGRLFELGGPQVLTMRELLRWIADATGRSPLFIDVPD
FLASALATGFGWAPGAPITRDQWLMLQSDNVVASGAAGLAELGITPTPLAAVADGWLVQYRRHGRFTVETPA

Sequences:

>Translated_312_residues
MQTFDGQLITVLGGGGFLGRYVVQRLLARGARVRIAQRDPRAATFLKPLGGLGQTQFVHADVRDAASVARAVQGSDAVIN
LVGAFDDMRAVQADGAGHVATTAKAAGARALVHVSAIGADRDSPSAYGRSKGDGEAAVRAAFTGAAILRPSIIFGREDRF
INRFAGMMRLAPVMPVIAPQAKFQPVYVGDVADAVVAALADTATGRLFELGGPQVLTMRELLRWIADATGRSPLFIDVPD
FLASALATGFGWAPGAPITRDQWLMLQSDNVVASGAAGLAELGITPTPLAAVADGWLVQYRRHGRFTVETPA
>Mature_312_residues
MQTFDGQLITVLGGGGFLGRYVVQRLLARGARVRIAQRDPRAATFLKPLGGLGQTQFVHADVRDAASVARAVQGSDAVIN
LVGAFDDMRAVQADGAGHVATTAKAAGARALVHVSAIGADRDSPSAYGRSKGDGEAAVRAAFTGAAILRPSIIFGREDRF
INRFAGMMRLAPVMPVIAPQAKFQPVYVGDVADAVVAALADTATGRLFELGGPQVLTMRELLRWIADATGRSPLFIDVPD
FLASALATGFGWAPGAPITRDQWLMLQSDNVVASGAAGLAELGITPTPLAAVADGWLVQYRRHGRFTVETPA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=321, Percent_Identity=37.3831775700935, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17556106, Length=338, Percent_Identity=31.3609467455621, Blast_Score=137, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24667554, Length=327, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 32686; Mature: 32686

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFDGQLITVLGGGGFLGRYVVQRLLARGARVRIAQRDPRAATFLKPLGGLGQTQFVHA
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEC
DVRDAASVARAVQGSDAVINLVGAFDDMRAVQADGAGHVATTAKAAGARALVHVSAIGAD
CHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEEECCC
RDSPSAYGRSKGDGEAAVRAAFTGAAILRPSIIFGREDRFINRFAGMMRLAPVMPVIAPQ
CCCCCCCCCCCCCCHHHHHHHHHCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCC
AKFQPVYVGDVADAVVAALADTATGRLFELGGPQVLTMRELLRWIADATGRSPLFIDVPD
CCCCCEEECHHHHHHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHCCCCCCEEEECHH
FLASALATGFGWAPGAPITRDQWLMLQSDNVVASGAAGLAELGITPTPLAAVADGWLVQY
HHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHH
RRHGRFTVETPA
HHCCCEEEECCC
>Mature Secondary Structure
MQTFDGQLITVLGGGGFLGRYVVQRLLARGARVRIAQRDPRAATFLKPLGGLGQTQFVHA
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEC
DVRDAASVARAVQGSDAVINLVGAFDDMRAVQADGAGHVATTAKAAGARALVHVSAIGAD
CHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEEECCC
RDSPSAYGRSKGDGEAAVRAAFTGAAILRPSIIFGREDRFINRFAGMMRLAPVMPVIAPQ
CCCCCCCCCCCCCCHHHHHHHHHCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCC
AKFQPVYVGDVADAVVAALADTATGRLFELGGPQVLTMRELLRWIADATGRSPLFIDVPD
CCCCCEEECHHHHHHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHCCCCCCEEEECHH
FLASALATGFGWAPGAPITRDQWLMLQSDNVVASGAAGLAELGITPTPLAAVADGWLVQY
HHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHH
RRHGRFTVETPA
HHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA