| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487615
Identifier: 103487615
GI number: 103487615
Start: 2238170
End: 2238463
Strand: Direct
Name: 103487615
Synonym: Sala_2134
Alternate gene names: NA
Gene position: 2238170-2238463 (Clockwise)
Preceding gene: 103487614
Following gene: 103487617
Centisome position: 66.91
GC content: 62.59
Gene sequence:
>294_bases ATGGCGAAACGCCGCCCGAAACGCGCCGAAGGAGATGCGAGCATCGCCAACATTTCGCGAACCCGCCGCGCGCAGCTGGT CGCCGAGTTCGAGGGCGAGCTGGGCATCGACTATAAGGCACGCGCCGCGGCGGAAGAGGCCGAACGACGCTGGATCGCGC GCAAGACCTTCATCGTCTGGACGATCGCGCTGATGTTCTTTGCCATCGCGTGCCAGAAGCTGTGGATCATGGGTCAGGAC GTCGATGTTCCCTTTTCCGACATCAATCCGGTGCGCAGCCTGGTCGGGGATTAA
Upstream 100 bases:
>100_bases AATTGATCGGCATCGCGCGCAATTGACCCTCGCCGGTTAACCAATTGGCAGGGCATCGCGGCTATATCCGGCAGCAGGAC TGGCTGGACCAAGGTGGATC
Downstream 100 bases:
>100_bases ACCCGGTTGACCTGACCCCCTGATTTTCCTCCAGTCTTGATTGGAGTCCGGCCCTGATGAAAGGACAGCCAACCGGATCG ACAACAGGGCAATAATGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MAKRRPKRAEGDASIANISRTRRAQLVAEFEGELGIDYKARAAAEEAERRWIARKTFIVWTIALMFFAIACQKLWIMGQD VDVPFSDINPVRSLVGD
Sequences:
>Translated_97_residues MAKRRPKRAEGDASIANISRTRRAQLVAEFEGELGIDYKARAAAEEAERRWIARKTFIVWTIALMFFAIACQKLWIMGQD VDVPFSDINPVRSLVGD >Mature_96_residues AKRRPKRAEGDASIANISRTRRAQLVAEFEGELGIDYKARAAAEEAERRWIARKTFIVWTIALMFFAIACQKLWIMGQDV DVPFSDINPVRSLVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11012; Mature: 10881
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRRPKRAEGDASIANISRTRRAQLVAEFEGELGIDYKARAAAEEAERRWIARKTFIVW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TIALMFFAIACQKLWIMGQDVDVPFSDINPVRSLVGD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AKRRPKRAEGDASIANISRTRRAQLVAEFEGELGIDYKARAAAEEAERRWIARKTFIVW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TIALMFFAIACQKLWIMGQDVDVPFSDINPVRSLVGD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA