| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487608
Identifier: 103487608
GI number: 103487608
Start: 2232363
End: 2233043
Strand: Direct
Name: 103487608
Synonym: Sala_2127
Alternate gene names: NA
Gene position: 2232363-2233043 (Clockwise)
Preceding gene: 103487607
Following gene: 103487610
Centisome position: 66.73
GC content: 65.35
Gene sequence:
>681_bases ATGTATGAGCTGATCACCGCCAACCGCAATTATTCGAGCTGGTCGCTGCGCCCGTGGATATTGATGAGGGGTCTGGACAT CGCGTTTCGCGACCGCATCGAGCCCTTTACCAAGCCGAGCAATTACGAGGAGTTCCGCGCCTTTTCACCGACCGGACAGG TGCCCGTGCTGCTTCACGAGGGCCGGACGATCCACGATTCGCTGGGCATCGCGCTTTATCTCGCCGACCGGCACGCGGGC GTGTGGCCGACCGATCCCGATGCGCGCGCCTGGGCGGTCTGTGCCGCGTGCGAAATGCACAGCGGCTTTGCGGCGCTCCG CAATGATTGCACGATGAACGTCGGGGTGCGCGTGACGCCGAAGCCGATGTCCGATGCCCTGTGCGCGAACGTCGCGCGCA TCCGCGAATTGTTCGAGGAAGGGCTGGCGCGCTTTGGCGGGCCGTGGCTGGCGGGCGCCGACTTTACCGCCGTCGATGCC TTTTTCGCGCCGGTCGCCTTTCGTATCCGCACCTATGGCCTCGACGTCGGCGCAGGGCAGGCGTGGGTCGATCATATGCT GGCGCATCCGGCGATGCTGGAGTGGGAGCGGCAGGCGCTCGCCGAGCAATGGCGCGAAGAAAGCCATGAGGCCGAACTGG CGGCGGCGGGGGTGATTACGGCGGATTATCGGGTGGGTTAG
Upstream 100 bases:
>100_bases ACTTCGGCAGCGTGCTCGCGGCGCTGCGCGACGGCACGCCGATGCCCTTTGCGCACGACCCCGGCTATGTCTCCCCCATG ATCGCCCAGGAACGCGAAGC
Downstream 100 bases:
>100_bases ACCGAACAAACTCCGTCATTGCGAGCGAAGCGAAGCAATCTCCAGCTATGCGCCATGCGCAAGGACGACAGCTTGAGATT GCCGCGTCGCCTTCGGCTCC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MYELITANRNYSSWSLRPWILMRGLDIAFRDRIEPFTKPSNYEEFRAFSPTGQVPVLLHEGRTIHDSLGIALYLADRHAG VWPTDPDARAWAVCAACEMHSGFAALRNDCTMNVGVRVTPKPMSDALCANVARIRELFEEGLARFGGPWLAGADFTAVDA FFAPVAFRIRTYGLDVGAGQAWVDHMLAHPAMLEWERQALAEQWREESHEAELAAAGVITADYRVG
Sequences:
>Translated_226_residues MYELITANRNYSSWSLRPWILMRGLDIAFRDRIEPFTKPSNYEEFRAFSPTGQVPVLLHEGRTIHDSLGIALYLADRHAG VWPTDPDARAWAVCAACEMHSGFAALRNDCTMNVGVRVTPKPMSDALCANVARIRELFEEGLARFGGPWLAGADFTAVDA FFAPVAFRIRTYGLDVGAGQAWVDHMLAHPAMLEWERQALAEQWREESHEAELAAAGVITADYRVG >Mature_226_residues MYELITANRNYSSWSLRPWILMRGLDIAFRDRIEPFTKPSNYEEFRAFSPTGQVPVLLHEGRTIHDSLGIALYLADRHAG VWPTDPDARAWAVCAACEMHSGFAALRNDCTMNVGVRVTPKPMSDALCANVARIRELFEEGLARFGGPWLAGADFTAVDA FFAPVAFRIRTYGLDVGAGQAWVDHMLAHPAMLEWERQALAEQWREESHEAELAAAGVITADYRVG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25226; Mature: 25226
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYELITANRNYSSWSLRPWILMRGLDIAFRDRIEPFTKPSNYEEFRAFSPTGQVPVLLHE CCEEEECCCCCCCCCCCHHHEECCCCHHHHHCCCCCCCCCCHHHHHEECCCCCEEEEEEC GRTIHDSLGIALYLADRHAGVWPTDPDARAWAVCAACEMHSGFAALRNDCTMNVGVRVTP CCEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEEECCEEECC KPMSDALCANVARIRELFEEGLARFGGPWLAGADFTAVDAFFAPVAFRIRTYGLDVGAGQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHEECCCCCCCH AWVDHMLAHPAMLEWERQALAEQWREESHEAELAAAGVITADYRVG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure MYELITANRNYSSWSLRPWILMRGLDIAFRDRIEPFTKPSNYEEFRAFSPTGQVPVLLHE CCEEEECCCCCCCCCCCHHHEECCCCHHHHHCCCCCCCCCCHHHHHEECCCCCEEEEEEC GRTIHDSLGIALYLADRHAGVWPTDPDARAWAVCAACEMHSGFAALRNDCTMNVGVRVTP CCEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEEECCEEECC KPMSDALCANVARIRELFEEGLARFGGPWLAGADFTAVDAFFAPVAFRIRTYGLDVGAGQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHEECCCCCCCH AWVDHMLAHPAMLEWERQALAEQWREESHEAELAAAGVITADYRVG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA