Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103487427
Identifier: 103487427
GI number: 103487427
Start: 2048670
End: 2048915
Strand: Direct
Name: 103487427
Synonym: Sala_1943
Alternate gene names: NA
Gene position: 2048670-2048915 (Clockwise)
Preceding gene: 103487426
Following gene: 103487428
Centisome position: 61.24
GC content: 61.79
Gene sequence:
>246_bases TTGACGATGCTGAAAAAGATCGGCCGCCTGTTCGTCATCAAGACCCGCTTCGAGGCGTGCCTCATCATTTACGCCCTCGC GGTCGGGGCGATGGCGCGGGGTTCCGCCTATCTGCACGAATATCCCGGCGTCGGGGGCAAATTGCTGATGCTCGCCTGCA CCGGCGCGGTGTTCCTGGCAGGCGCAAAGATTTTCGATTGCCTGCGCTACGAACAGGCGGAGGCGACCGCAAAGGATCGT GGCTGA
Upstream 100 bases:
>100_bases ACGGCGCTTGCTTTCACCTGTCGGGTTAATTTACAGTTTACCATCCCGGTCGTGCCGCGAATCCCCTATTTGCGCGGATG GCACGGCGCTTGCTTGGACA
Downstream 100 bases:
>100_bases CGCCGATGGGTCTTTCGCGCGTGATCGCGATATGCGACAGCGTCGGACATGAGCAGGATCAGCGGCCGCCCGGCGATCAG CACCCAGCATGTCCATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTMLKKIGRLFVIKTRFEACLIIYALAVGAMARGSAYLHEYPGVGGKLLMLACTGAVFLAGAKIFDCLRYEQAEATAKDR G
Sequences:
>Translated_81_residues MTMLKKIGRLFVIKTRFEACLIIYALAVGAMARGSAYLHEYPGVGGKLLMLACTGAVFLAGAKIFDCLRYEQAEATAKDR G >Mature_80_residues TMLKKIGRLFVIKTRFEACLIIYALAVGAMARGSAYLHEYPGVGGKLLMLACTGAVFLAGAKIFDCLRYEQAEATAKDRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8776; Mature: 8644
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLKKIGRLFVIKTRFEACLIIYALAVGAMARGSAYLHEYPGVGGKLLMLACTGAVFLA CCHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHH GAKIFDCLRYEQAEATAKDRG HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TMLKKIGRLFVIKTRFEACLIIYALAVGAMARGSAYLHEYPGVGGKLLMLACTGAVFLA CHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHH GAKIFDCLRYEQAEATAKDRG HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA