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The map label for this gene is 103487426

Identifier: 103487426

GI number: 103487426

Start: 2047794

End: 2048465

Strand: Direct

Name: 103487426

Synonym: Sala_1942

Alternate gene names: NA

Gene position: 2047794-2048465 (Clockwise)

Preceding gene: 103487425

Following gene: 103487427

Centisome position: 61.22

GC content: 68.9

Gene sequence:

>672_bases
TTGCAGGGTCGCGAACTGATCGACACGGTCGAGGTGCCGGGCGGCGAGGCGCTGCGCCTGCTCCGGCGCGGCGACGAATA
TATCATCGCGATCGGCGCGAGCGAGCTGATGAGCAGCCGCATGAGCGGTTCGGAAGAAGCGCTGGCGACGATGAGCTGCG
AACGATTGCGCAACAGCAAAAACGCCCGCCTGCTGATCGGCGGCTATGGCATGGGTTTCACGCTCCGCGCGGCGCTCGCT
GCGCTCGGCCCCGATGCGCAGATCACCGTCGCCGAGCTGGTTCCCGCAATCATCGACTGGGCGCGCGGGCCGATGGCCGC
GCTTGCCGGGGGCTGCCTCGACGATCGGCGCGTTAATCTGGTGATCGGCGACGTGGCGGCCACCATTGCCGACGCGCCTC
GACGCTTCGATGCGATCCTGCTCGATGTCGACAATGGCCCCGATGGCCTGGTCCGCGCCGAAAACGACCGGCTTTATTCT
CCTGTTGGCCTCGCCGCCGCAAAGGCGGCGTTGCGCCCCGGCGGGCTCCTCGCCATCTGGTCGGCGGCACCCGACGTCCG
CTTCACCCGGCGGCTGGCGGCGGCGGGTTATCGGGTGGACGAAGTCCATGTGCGCGCCCGCGCGGCAGGCAAGGGCGCGC
GGCACGTCATCTGGTTTGCGCAGACGGATTAG

Upstream 100 bases:

>100_bases
GCCCGCCGATCTCGCCTCGACCACGCTGCTCCATGACGTGCGCAGGGCGCGCCTCGCGCTGCTCGACGCGCTCGACCTTT
CCGAACTCGGCTGACGACAT

Downstream 100 bases:

>100_bases
ACGGATGGTTCGGTTCGGACCGGGAAGTGGTGATACCCCTCGTCGTCCTCGCGGTGAAAAGGGGATGGCGGATGAAATGA
TGGCCGATCCGCATCCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQGRELIDTVEVPGGEALRLLRRGDEYIIAIGASELMSSRMSGSEEALATMSCERLRNSKNARLLIGGYGMGFTLRAALA
ALGPDAQITVAELVPAIIDWARGPMAALAGGCLDDRRVNLVIGDVAATIADAPRRFDAILLDVDNGPDGLVRAENDRLYS
PVGLAAAKAALRPGGLLAIWSAAPDVRFTRRLAAAGYRVDEVHVRARAAGKGARHVIWFAQTD

Sequences:

>Translated_223_residues
MQGRELIDTVEVPGGEALRLLRRGDEYIIAIGASELMSSRMSGSEEALATMSCERLRNSKNARLLIGGYGMGFTLRAALA
ALGPDAQITVAELVPAIIDWARGPMAALAGGCLDDRRVNLVIGDVAATIADAPRRFDAILLDVDNGPDGLVRAENDRLYS
PVGLAAAKAALRPGGLLAIWSAAPDVRFTRRLAAAGYRVDEVHVRARAAGKGARHVIWFAQTD
>Mature_223_residues
MQGRELIDTVEVPGGEALRLLRRGDEYIIAIGASELMSSRMSGSEEALATMSCERLRNSKNARLLIGGYGMGFTLRAALA
ALGPDAQITVAELVPAIIDWARGPMAALAGGCLDDRRVNLVIGDVAATIADAPRRFDAILLDVDNGPDGLVRAENDRLYS
PVGLAAAKAALRPGGLLAIWSAAPDVRFTRRLAAAGYRVDEVHVRARAAGKGARHVIWFAQTD

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23673; Mature: 23673

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRELIDTVEVPGGEALRLLRRGDEYIIAIGASELMSSRMSGSEEALATMSCERLRNSK
CCCCHHHHEECCCCHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCC
NARLLIGGYGMGFTLRAALAALGPDAQITVAELVPAIIDWARGPMAALAGGCLDDRRVNL
CCEEEEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEE
VIGDVAATIADAPRRFDAILLDVDNGPDGLVRAENDRLYSPVGLAAAKAALRPGGLLAIW
EEEHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCEECCHHHHHHHHHCCCCCEEEEE
SAAPDVRFTRRLAAAGYRVDEVHVRARAAGKGARHVIWFAQTD
CCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MQGRELIDTVEVPGGEALRLLRRGDEYIIAIGASELMSSRMSGSEEALATMSCERLRNSK
CCCCHHHHEECCCCHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCC
NARLLIGGYGMGFTLRAALAALGPDAQITVAELVPAIIDWARGPMAALAGGCLDDRRVNL
CCEEEEEECCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEE
VIGDVAATIADAPRRFDAILLDVDNGPDGLVRAENDRLYSPVGLAAAKAALRPGGLLAIW
EEEHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCEECCHHHHHHHHHCCCCCEEEEE
SAAPDVRFTRRLAAAGYRVDEVHVRARAAGKGARHVIWFAQTD
CCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA