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The map label for this gene is soxA [H]

Identifier: 103487329

GI number: 103487329

Start: 1939779

End: 1941047

Strand: Direct

Name: soxA [H]

Synonym: Sala_1845

Alternate gene names: 103487329

Gene position: 1939779-1941047 (Clockwise)

Preceding gene: 103487328

Following gene: 103487330

Centisome position: 57.99

GC content: 67.3

Gene sequence:

>1269_bases
TTGGCCGTTGATCCCCCCTCCAGACGCGCTTTGCTCACCGGCCTCGCCGCGCTGCCCGTTGCGGCGAGCGCGGCGGCGGC
CGAGCGCAAGGAGCGCCGATCGAAAAAGCGCAAAGCGCCGCGACCAAAGGTCCAGCATGTCGACGTCGCAATCATCGGCG
CAGGCGTCTTCGGCGCGTGGACCGCGTGGCACCTTGTCCGCGCCGGGAAGAGTGTGCGGCTGTTCGACGCCTATGGCGCG
GGCAACGCGCGCTCCTCCTCCGGCGGGGAAAGCCGCGTGATCCGAATGGGTTATGGTGCGGACAGCCTTTATTCGCAGAT
GGCACGCGAATCGCTGCCCTATTGGAAGGCCTTATCCGACACCGCCAGCGCGCCGATCTTTCACAACACCGGCGTGCTGT
GGTTTGCGCCGCAGGGCGAAGCCTATACCGCCCAGTCGCTGGCGTGGTTACAAGCCAACCGCGTCGACCACGAGCATGGC
GACGTCCGCTGGCTCCAGACCAAATATCGCCAGATCCAATTCTATCAGGGCGAAACGGGCATCCTCGAAACCGAGGCGGG
CGCGCTGATCGCCGCGCGCGGGGTGCAGGAAGTGACCGCCGATGCGGGGGTGGAGGTCGAGCGCGTCGTCATGCCCGCAC
CGCTTTTTTCCAAGCGGGTCAAGCGTCACGCGCTTCCCGACGGCGGCACCGCCGACCATCTCGTCTATTGCGCGGGGCCG
TGGCTCGCTGAAATCTTCCCGCAGCAATTGACGGGACGGATCGTCGCGACGCGGCAGGAGGTCTATCATTTCGGCGCGCC
GCAGGGCGACACGCGCTTCGCCCCGCCTGAACTGCCCGTCTGGGCCGATTTCAACAACGGCCGCATCGTCTATGGCATCC
CCGACCTTGAGGGGGCGGGGTTCAAGATCGCTTTCGACACGCACGGCCCGGTGATCGACCCCGACACGATGGAGCGCGAG
CCGACCCCCGCGGGAATCGCCGCGGCGCGCGCCTATGTCGCGCGGCGCTTTCCCGGCCTTGCGGGGGCGCCGCTGATCGG
CGCGCGCGTCTGCCAATATGAGAACAGCGCGAACGGCGATTATCTGCTCGACCGCTTTCCGGGGCAGGAGCGCGTGTGGC
TCGTCGGCGCCGGGTCGGGGCACGGGTTCAAGAATGGCCCCGCGGTCGGCAAGCGCGTCGCGGCGCATATTCTAGACAAG
GATCTGGCCATCGAACCGCGTTTCAGTTTCGCGAGCAAGGGCACGGTGGCGGGCCGGACGGTGTTCTGA

Upstream 100 bases:

>100_bases
GACCCGATGATGGCAAGCCCCGACGAGATCCGCCGCATGACCCCGCTCGAAACCTGGATCGGTGGCTATCGCTATTACAA
GAAGAAGGAGGGTGCGACGA

Downstream 100 bases:

>100_bases
TGAGCCCCTGCTCCATCATTCGTCATCCCGGCGAAGGCCGGGATCTCGCCGGTGCGGTTCCACGAGAGGGTGAGATCCCG
GCCTTCGCCGGGATGACGAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: MSOX [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAVDPPSRRALLTGLAALPVAASAAAAERKERRSKKRKAPRPKVQHVDVAIIGAGVFGAWTAWHLVRAGKSVRLFDAYGA
GNARSSSGGESRVIRMGYGADSLYSQMARESLPYWKALSDTASAPIFHNTGVLWFAPQGEAYTAQSLAWLQANRVDHEHG
DVRWLQTKYRQIQFYQGETGILETEAGALIAARGVQEVTADAGVEVERVVMPAPLFSKRVKRHALPDGGTADHLVYCAGP
WLAEIFPQQLTGRIVATRQEVYHFGAPQGDTRFAPPELPVWADFNNGRIVYGIPDLEGAGFKIAFDTHGPVIDPDTMERE
PTPAGIAAARAYVARRFPGLAGAPLIGARVCQYENSANGDYLLDRFPGQERVWLVGAGSGHGFKNGPAVGKRVAAHILDK
DLAIEPRFSFASKGTVAGRTVF

Sequences:

>Translated_422_residues
MAVDPPSRRALLTGLAALPVAASAAAAERKERRSKKRKAPRPKVQHVDVAIIGAGVFGAWTAWHLVRAGKSVRLFDAYGA
GNARSSSGGESRVIRMGYGADSLYSQMARESLPYWKALSDTASAPIFHNTGVLWFAPQGEAYTAQSLAWLQANRVDHEHG
DVRWLQTKYRQIQFYQGETGILETEAGALIAARGVQEVTADAGVEVERVVMPAPLFSKRVKRHALPDGGTADHLVYCAGP
WLAEIFPQQLTGRIVATRQEVYHFGAPQGDTRFAPPELPVWADFNNGRIVYGIPDLEGAGFKIAFDTHGPVIDPDTMERE
PTPAGIAAARAYVARRFPGLAGAPLIGARVCQYENSANGDYLLDRFPGQERVWLVGAGSGHGFKNGPAVGKRVAAHILDK
DLAIEPRFSFASKGTVAGRTVF
>Mature_421_residues
AVDPPSRRALLTGLAALPVAASAAAAERKERRSKKRKAPRPKVQHVDVAIIGAGVFGAWTAWHLVRAGKSVRLFDAYGAG
NARSSSGGESRVIRMGYGADSLYSQMARESLPYWKALSDTASAPIFHNTGVLWFAPQGEAYTAQSLAWLQANRVDHEHGD
VRWLQTKYRQIQFYQGETGILETEAGALIAARGVQEVTADAGVEVERVVMPAPLFSKRVKRHALPDGGTADHLVYCAGPW
LAEIFPQQLTGRIVATRQEVYHFGAPQGDTRFAPPELPVWADFNNGRIVYGIPDLEGAGFKIAFDTHGPVIDPDTMEREP
TPAGIAAARAYVARRFPGLAGAPLIGARVCQYENSANGDYLLDRFPGQERVWLVGAGSGHGFKNGPAVGKRVAAHILDKD
LAIEPRFSFASKGTVAGRTVF

Specific function: Catalyzes the oxidative demethylation of sarcosine [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MSOX/MTOX family. MSOX subfamily [H]

Homologues:

Organism=Homo sapiens, GI60499001, Length=369, Percent_Identity=29.2682926829268, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1787298, Length=377, Percent_Identity=26.790450928382, Blast_Score=106, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI115535191, Length=373, Percent_Identity=21.1796246648794, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006281 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 45606; Mature: 45475

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDPPSRRALLTGLAALPVAASAAAAERKERRSKKRKAPRPKVQHVDVAIIGAGVFGAW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHH
TAWHLVRAGKSVRLFDAYGAGNARSSSGGESRVIRMGYGADSLYSQMARESLPYWKALSD
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHH
TASAPIFHNTGVLWFAPQGEAYTAQSLAWLQANRVDHEHGDVRWLQTKYRQIQFYQGETG
CCCCCEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHEEHHCEEEEEEECCCC
ILETEAGALIAARGVQEVTADAGVEVERVVMPAPLFSKRVKRHALPDGGTADHLVYCAGP
EEEECCCCEEECCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCC
WLAEIFPQQLTGRIVATRQEVYHFGAPQGDTRFAPPELPVWADFNNGRIVYGIPDLEGAG
HHHHHHHHHHCCHHEEEHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCC
FKIAFDTHGPVIDPDTMEREPTPAGIAAARAYVARRFPGLAGAPLIGARVCQYENSANGD
EEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCC
YLLDRFPGQERVWLVGAGSGHGFKNGPAVGKRVAAHILDKDLAIEPRFSFASKGTVAGRT
EEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
VF
CC
>Mature Secondary Structure 
AVDPPSRRALLTGLAALPVAASAAAAERKERRSKKRKAPRPKVQHVDVAIIGAGVFGAW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHH
TAWHLVRAGKSVRLFDAYGAGNARSSSGGESRVIRMGYGADSLYSQMARESLPYWKALSD
HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHH
TASAPIFHNTGVLWFAPQGEAYTAQSLAWLQANRVDHEHGDVRWLQTKYRQIQFYQGETG
CCCCCEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHEEHHCEEEEEEECCCC
ILETEAGALIAARGVQEVTADAGVEVERVVMPAPLFSKRVKRHALPDGGTADHLVYCAGP
EEEECCCCEEECCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCC
WLAEIFPQQLTGRIVATRQEVYHFGAPQGDTRFAPPELPVWADFNNGRIVYGIPDLEGAG
HHHHHHHHHHCCHHEEEHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCC
FKIAFDTHGPVIDPDTMEREPTPAGIAAARAYVARRFPGLAGAPLIGARVCQYENSANGD
EEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCC
YLLDRFPGQERVWLVGAGSGHGFKNGPAVGKRVAAHILDKDLAIEPRFSFASKGTVAGRT
EEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
VF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368683 [H]