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The map label for this gene is ytcJ [H]

Identifier: 103487328

GI number: 103487328

Start: 1938125

End: 1939789

Strand: Direct

Name: ytcJ [H]

Synonym: Sala_1844

Alternate gene names: 103487328

Gene position: 1938125-1939789 (Clockwise)

Preceding gene: 103487327

Following gene: 103487329

Centisome position: 57.94

GC content: 67.39

Gene sequence:

>1665_bases
ATGAAGCGCCTTATCCTGACCGCGCTGGCCCTCACCCTCGCCGCCCCCGCGCACGCCGATACGCTGGTCGACAATGTCAA
CGGCATCACGCTCGACAGGGACGGCAAGCTCGTCCGCTTTACCGGCCTTGTGATCGACGGCGAAGGCAAGGTGAAGCAGT
TGCTCGACCGCAAGGACAAGCGCCCCGAGCGCCCCGATTTCAAGGAGGATGGAAAGGGCCGGACGCTGATTCCCGGCCTG
ATCGACGCGCACGGGCATGTCATGGGGCTTGGTTTCCAGCTGATGCTGCTCGACCTCAGCGACACGAACAGCCTGGCCGA
GGCGCAGGCGGCGATCCGCCGATATGCCGCCGAAAATCCCGAAATGCCGTGGATCATCGGGCGCGGCTGGAATCAGGAGA
AATGGGGACTCGGCCGCTTCCCGACCGCCGCCGACCTCGACGCCGCGGTGTCCAACCGCCCCGTCTGGCTCGAGCGCGTC
GACGGCCATGCAGGCTGGGCGAACAGCGCGGCGATGGCGGCGGCAAAGGTCACCGCGGCGAGCAAGTCGCCCGAAGGCGG
ACGGATCGAGATGGCCGATGGCAAACCGTCGGGCGTCTTCGTCGATGCCGCGATGAGCCTGATCGACGTTGCCAAACCCA
GGCCGCTCGCGCGCGATCTCGACCGAGCGCTCTATCTGGCGCAGCAAAAATTGCTCGAACAGGGGATCACCGCGATCGCC
GACATGGGCACGACGATCGCCGAATGGCAGGCGTATCGCCGCGCGGGCGACAAGAAACAGCTTGCGGTGCGCATCCTCTC
CTATGGCGGCGACATCGACAATATGGCGATCATCGCGGGCAGCGAACCGACGCCCTGGCTTTACGACGACCGCCTGCGCA
TGGTGGGCGTGAAGCTCTATCTCGACGGCGCGCTCGGTTCGCGCGGCGCGTGGCTGAAGGCGCCCTATACCGATGCGCCG
GGGCAGAAAGGCCTGCCCCTGCTCACCCCCGCGCAGCTCCGCAACAAGATGGTGCGCGCGTCGATGGACAGGTTCCAGGT
CGCGATCCACGCTATCGGCGACGCCGCCAATGCCGAGGCGCTGGCCGCCATTGCCGACCTCGACGCCGACCTTCCCGGCG
AGCGGCGCTGGCGCATCGAACATGCGCAGGTGATTGACCCCGCCGACATGGCGCGCTTCGCCAGCCTGAAGGTCGTCGCC
TCGATGCAGCCGGTGCATCAGACGAGCGACCGGCTGATGGCCGAAGCGCGGCTCGGCCCCGATCGCCTCGCGGGCGCCTA
TGCGTGGCGCAGCCTCGAAACGGCGGGCGTCCGCCTTGCCTTCGGCTCCGACGTGCCGGTCGAAAGCGCCAATCCGTTCG
CTGGGCTCGCTGCGGCGATCTCGCGCACCGATGCCGCGGGCCAGCCGTTCGGCGGCTGGCACCCCGAGGAAGCGGTGAGC
CGCGAGACCGCGCTCGACGGCTTCACCCGCACCGCGGCTTATGCCGGCTTTGCCGAGGACCGCATCGGCACGTTGATGCC
AGGGATGCGCGCTGACTTCCTGATCGTCGATACCGACCCGATGATGGCAAGCCCCGACGAGATCCGCCGCATGACCCCGC
TCGAAACCTGGATCGGTGGCTATCGCTATTACAAGAAGAAGGAGGGTGCGACGATTGGCCGTTGA

Upstream 100 bases:

>100_bases
CCCTGCCGGTCGCCAGCCTCGTCGATCAATTCTACGCCGATGTGCAAAAGGTCGGCGGCGGGCGCAAGGACACGAGCTCG
CTCGTGACGCGGCTGCCGAA

Downstream 100 bases:

>100_bases
TCCCCCCTCCAGACGCGCTTTGCTCACCGGCCTCGCCGCGCTGCCCGTTGCGGCGAGCGCGGCGGCGGCCGAGCGCAAGG
AGCGCCGATCGAAAAAGCGC

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MKRLILTALALTLAAPAHADTLVDNVNGITLDRDGKLVRFTGLVIDGEGKVKQLLDRKDKRPERPDFKEDGKGRTLIPGL
IDAHGHVMGLGFQLMLLDLSDTNSLAEAQAAIRRYAAENPEMPWIIGRGWNQEKWGLGRFPTAADLDAAVSNRPVWLERV
DGHAGWANSAAMAAAKVTAASKSPEGGRIEMADGKPSGVFVDAAMSLIDVAKPRPLARDLDRALYLAQQKLLEQGITAIA
DMGTTIAEWQAYRRAGDKKQLAVRILSYGGDIDNMAIIAGSEPTPWLYDDRLRMVGVKLYLDGALGSRGAWLKAPYTDAP
GQKGLPLLTPAQLRNKMVRASMDRFQVAIHAIGDAANAEALAAIADLDADLPGERRWRIEHAQVIDPADMARFASLKVVA
SMQPVHQTSDRLMAEARLGPDRLAGAYAWRSLETAGVRLAFGSDVPVESANPFAGLAAAISRTDAAGQPFGGWHPEEAVS
RETALDGFTRTAAYAGFAEDRIGTLMPGMRADFLIVDTDPMMASPDEIRRMTPLETWIGGYRYYKKKEGATIGR

Sequences:

>Translated_554_residues
MKRLILTALALTLAAPAHADTLVDNVNGITLDRDGKLVRFTGLVIDGEGKVKQLLDRKDKRPERPDFKEDGKGRTLIPGL
IDAHGHVMGLGFQLMLLDLSDTNSLAEAQAAIRRYAAENPEMPWIIGRGWNQEKWGLGRFPTAADLDAAVSNRPVWLERV
DGHAGWANSAAMAAAKVTAASKSPEGGRIEMADGKPSGVFVDAAMSLIDVAKPRPLARDLDRALYLAQQKLLEQGITAIA
DMGTTIAEWQAYRRAGDKKQLAVRILSYGGDIDNMAIIAGSEPTPWLYDDRLRMVGVKLYLDGALGSRGAWLKAPYTDAP
GQKGLPLLTPAQLRNKMVRASMDRFQVAIHAIGDAANAEALAAIADLDADLPGERRWRIEHAQVIDPADMARFASLKVVA
SMQPVHQTSDRLMAEARLGPDRLAGAYAWRSLETAGVRLAFGSDVPVESANPFAGLAAAISRTDAAGQPFGGWHPEEAVS
RETALDGFTRTAAYAGFAEDRIGTLMPGMRADFLIVDTDPMMASPDEIRRMTPLETWIGGYRYYKKKEGATIGR
>Mature_554_residues
MKRLILTALALTLAAPAHADTLVDNVNGITLDRDGKLVRFTGLVIDGEGKVKQLLDRKDKRPERPDFKEDGKGRTLIPGL
IDAHGHVMGLGFQLMLLDLSDTNSLAEAQAAIRRYAAENPEMPWIIGRGWNQEKWGLGRFPTAADLDAAVSNRPVWLERV
DGHAGWANSAAMAAAKVTAASKSPEGGRIEMADGKPSGVFVDAAMSLIDVAKPRPLARDLDRALYLAQQKLLEQGITAIA
DMGTTIAEWQAYRRAGDKKQLAVRILSYGGDIDNMAIIAGSEPTPWLYDDRLRMVGVKLYLDGALGSRGAWLKAPYTDAP
GQKGLPLLTPAQLRNKMVRASMDRFQVAIHAIGDAANAEALAAIADLDADLPGERRWRIEHAQVIDPADMARFASLKVVA
SMQPVHQTSDRLMAEARLGPDRLAGAYAWRSLETAGVRLAFGSDVPVESANPFAGLAAAISRTDAAGQPFGGWHPEEAVS
RETALDGFTRTAAYAGFAEDRIGTLMPGMRADFLIVDTDPMMASPDEIRRMTPLETWIGGYRYYKKKEGATIGR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 60026; Mature: 60026

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLILTALALTLAAPAHADTLVDNVNGITLDRDGKLVRFTGLVIDGEGKVKQLLDRKDK
CCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHHHCC
RPERPDFKEDGKGRTLIPGLIDAHGHVMGLGFQLMLLDLSDTNSLAEAQAAIRRYAAENP
CCCCCCCCCCCCCCEECCHHHCCCCCEEEECEEEEEEEECCCCHHHHHHHHHHHHHCCCC
EMPWIIGRGWNQEKWGLGRFPTAADLDAAVSNRPVWLERVDGHAGWANSAAMAAAKVTAA
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHEEC
SKSPEGGRIEMADGKPSGVFVDAAMSLIDVAKPRPLARDLDRALYLAQQKLLEQGITAIA
CCCCCCCEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DMGTTIAEWQAYRRAGDKKQLAVRILSYGGDIDNMAIIAGSEPTPWLYDDRLRMVGVKLY
HCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCCEEEEEEEEE
LDGALGSRGAWLKAPYTDAPGQKGLPLLTPAQLRNKMVRASMDRFQVAIHAIGDAANAEA
EECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LAAIADLDADLPGERRWRIEHAQVIDPADMARFASLKVVASMQPVHQTSDRLMAEARLGP
HHHHHHCCCCCCCCCEEEECHHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
DRLAGAYAWRSLETAGVRLAFGSDVPVESANPFAGLAAAISRTDAAGQPFGGWHPEEAVS
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RETALDGFTRTAAYAGFAEDRIGTLMPGMRADFLIVDTDPMMASPDEIRRMTPLETWIGG
HHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCHHHHHHHH
YRYYKKKEGATIGR
HHEEHHCCCCCCCC
>Mature Secondary Structure
MKRLILTALALTLAAPAHADTLVDNVNGITLDRDGKLVRFTGLVIDGEGKVKQLLDRKDK
CCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHHHCC
RPERPDFKEDGKGRTLIPGLIDAHGHVMGLGFQLMLLDLSDTNSLAEAQAAIRRYAAENP
CCCCCCCCCCCCCCEECCHHHCCCCCEEEECEEEEEEEECCCCHHHHHHHHHHHHHCCCC
EMPWIIGRGWNQEKWGLGRFPTAADLDAAVSNRPVWLERVDGHAGWANSAAMAAAKVTAA
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHEEC
SKSPEGGRIEMADGKPSGVFVDAAMSLIDVAKPRPLARDLDRALYLAQQKLLEQGITAIA
CCCCCCCEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DMGTTIAEWQAYRRAGDKKQLAVRILSYGGDIDNMAIIAGSEPTPWLYDDRLRMVGVKLY
HCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCCEEEEEEEEE
LDGALGSRGAWLKAPYTDAPGQKGLPLLTPAQLRNKMVRASMDRFQVAIHAIGDAANAEA
EECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LAAIADLDADLPGERRWRIEHAQVIDPADMARFASLKVVASMQPVHQTSDRLMAEARLGP
HHHHHHCCCCCCCCCEEEECHHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
DRLAGAYAWRSLETAGVRLAFGSDVPVESANPFAGLAAAISRTDAAGQPFGGWHPEEAVS
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RETALDGFTRTAAYAGFAEDRIGTLMPGMRADFLIVDTDPMMASPDEIRRMTPLETWIGG
HHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCHHHHHHHH
YRYYKKKEGATIGR
HHEEHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]