The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yhiN [H]

Identifier: 103487315

GI number: 103487315

Start: 1925390

End: 1926598

Strand: Direct

Name: yhiN [H]

Synonym: Sala_1831

Alternate gene names: 103487315

Gene position: 1925390-1926598 (Clockwise)

Preceding gene: 103487314

Following gene: 103487316

Centisome position: 57.56

GC content: 67.49

Gene sequence:

>1209_bases
ATGGGCTGGCGATCGCAAAGCTGCACTGACGCCTGCGTGGCAGTATTCGATTATGACGCCATCGTGCTGGGTGCCGGCGC
GGCCGGGCTGATGTGCGCCGCGGTCGCGGGGCAGCGGGGGCGGCGCGTCCTGCTGCTCGATCACGCCGACGAGGTGGGCA
AGAAAATCCTGATTTCGGGCGGCGGTCGCTGCAATTTCACCAACATCTACACGCGCCCCGAAACCTATATTTCGGCGAAC
CCGCATTTCGCGAAGTCGGCGCTCGCGCGCTACGCCCCCGCCGACTTCATCGCGCTCGTCGAGCGCCATGGCATCGCATA
TCATGAAAAGACGCTCGGCCAGTTGTTCTGCGATGGATCGGCGAAGCAGGTCGTGGCGATGCTGCTCGACGAATGCGCAA
GGGGCGGCGTCGACGTCCGCTGCGGGCAGCCGGTGCGTCAGGTTACCCACGCCGACGGTCGGTTCGCTGTCCGCTTCGGC
GACCTGGACTTCGCCGCCCCCAATCTTGTCATTGCGACAGGCGGGCCTTCGATCCCGAAGATGGGCGCGTCCGGTTTCGC
TTATGATCTCGCCCGCCAATTCGGCCTCAAGGTCGTCGAGCCGCGCCCTGCGCTCGTCCCGCTGACGCTTGGCGGCGACG
ATGTGCTGTTCCGCGAGTTGTCGGGCGTTGCGACGCCGGTCGAGGCGCGCGCGGGCAAGGCGGCGTTTCGCGAAGCCGCG
CTCTTCACGCACAAGGGGCTTTCCGGTCCGGCAATCCTTCAGGTCAGCAGCTATTGGCGCCACGGCGAACCGGTGACGAT
CGACTTTTTGCCCGATGCCGCGCCGGGCTGGCTGCTCGGAGCGAAGCGCGCGCGCCCGCGCGCGACGCTCGCTTCGGCGC
TCGCGCTCCCCGACCGCCTTGCGCAGACGCTCGCCGACCGCCTTGCGCTCCCCGGCGAACTCGGCGCCCAGACCGACCGC
AAGCTCGCCGACGCCGAAGCGCGCCTCAAACGCTGGACTTTCCGCCCCAACGGCACCGAAGGCTTCGCAAAGGCCGAGGT
CACCGCCGGCGGCATTTCGACCGCAAACCTGTCCTCGCAAACAATGATGGCCAAATGCGTGCCGGGACTGTATGCGGTCG
GCGAAGCCGTGGACGTCACCGGGTGGCTGGGCGGCTATAATTTTCAATGGGCCTGGGCCAGCGGACACGCGGCGGGCCAG
GCCCTTTAG

Upstream 100 bases:

>100_bases
GACAAGCTGCACACGCTCGCGAAAAAGGGCATGGCGATGAAAGCGATCGCCAGGGCGCTGACGCGCAGCGAGGAATCGGT
CAAGCAACGCGCCAAGGCCG

Downstream 100 bases:

>100_bases
GAAAACCGACCTACTCATTCTCGTCATGCCGGACTTGATCCGGCATCCATACGCCGATGCTGCACCCCTGGCGGTGGACC
CCGGATCAAGTCCGGGGTGA

Product: HI0933-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MGWRSQSCTDACVAVFDYDAIVLGAGAAGLMCAAVAGQRGRRVLLLDHADEVGKKILISGGGRCNFTNIYTRPETYISAN
PHFAKSALARYAPADFIALVERHGIAYHEKTLGQLFCDGSAKQVVAMLLDECARGGVDVRCGQPVRQVTHADGRFAVRFG
DLDFAAPNLVIATGGPSIPKMGASGFAYDLARQFGLKVVEPRPALVPLTLGGDDVLFRELSGVATPVEARAGKAAFREAA
LFTHKGLSGPAILQVSSYWRHGEPVTIDFLPDAAPGWLLGAKRARPRATLASALALPDRLAQTLADRLALPGELGAQTDR
KLADAEARLKRWTFRPNGTEGFAKAEVTAGGISTANLSSQTMMAKCVPGLYAVGEAVDVTGWLGGYNFQWAWASGHAAGQ
AL

Sequences:

>Translated_402_residues
MGWRSQSCTDACVAVFDYDAIVLGAGAAGLMCAAVAGQRGRRVLLLDHADEVGKKILISGGGRCNFTNIYTRPETYISAN
PHFAKSALARYAPADFIALVERHGIAYHEKTLGQLFCDGSAKQVVAMLLDECARGGVDVRCGQPVRQVTHADGRFAVRFG
DLDFAAPNLVIATGGPSIPKMGASGFAYDLARQFGLKVVEPRPALVPLTLGGDDVLFRELSGVATPVEARAGKAAFREAA
LFTHKGLSGPAILQVSSYWRHGEPVTIDFLPDAAPGWLLGAKRARPRATLASALALPDRLAQTLADRLALPGELGAQTDR
KLADAEARLKRWTFRPNGTEGFAKAEVTAGGISTANLSSQTMMAKCVPGLYAVGEAVDVTGWLGGYNFQWAWASGHAAGQ
AL
>Mature_401_residues
GWRSQSCTDACVAVFDYDAIVLGAGAAGLMCAAVAGQRGRRVLLLDHADEVGKKILISGGGRCNFTNIYTRPETYISANP
HFAKSALARYAPADFIALVERHGIAYHEKTLGQLFCDGSAKQVVAMLLDECARGGVDVRCGQPVRQVTHADGRFAVRFGD
LDFAAPNLVIATGGPSIPKMGASGFAYDLARQFGLKVVEPRPALVPLTLGGDDVLFRELSGVATPVEARAGKAAFREAAL
FTHKGLSGPAILQVSSYWRHGEPVTIDFLPDAAPGWLLGAKRARPRATLASALALPDRLAQTLADRLALPGELGAQTDRK
LADAEARLKRWTFRPNGTEGFAKAEVTAGGISTANLSSQTMMAKCVPGLYAVGEAVDVTGWLGGYNFQWAWASGHAAGQA
L

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0933 [H]

Homologues:

Organism=Escherichia coli, GI2367234, Length=394, Percent_Identity=52.5380710659898, Blast_Score=370, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027
- InterPro:   IPR023166 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 42508; Mature: 42377

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWRSQSCTDACVAVFDYDAIVLGAGAAGLMCAAVAGQRGRRVLLLDHADEVGKKILISG
CCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCHHCCCEEEEEC
GGRCNFTNIYTRPETYISANPHFAKSALARYAPADFIALVERHGIAYHEKTLGQLFCDGS
CCEEEEEEEEECCCEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCC
AKQVVAMLLDECARGGVDVRCGQPVRQVTHADGRFAVRFGDLDFAAPNLVIATGGPSIPK
HHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCC
MGASGFAYDLARQFGLKVVEPRPALVPLTLGGDDVLFRELSGVATPVEARAGKAAFREAA
CCCCCHHHHHHHHHCCEEECCCCCEEEEEECCCHHHHHHHHCCCCCHHHHCCHHHHHHHH
LFTHKGLSGPAILQVSSYWRHGEPVTIDFLPDAAPGWLLGAKRARPRATLASALALPDRL
HHHCCCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCEECCCCCCCHHHHHHHHHCHHHH
AQTLADRLALPGELGAQTDRKLADAEARLKRWTFRPNGTEGFAKAEVTAGGISTANLSSQ
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCEECCCCHH
TMMAKCVPGLYAVGEAVDVTGWLGGYNFQWAWASGHAAGQAL
HHHHHHCCCHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
GWRSQSCTDACVAVFDYDAIVLGAGAAGLMCAAVAGQRGRRVLLLDHADEVGKKILISG
CCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCHHCCCEEEEEC
GGRCNFTNIYTRPETYISANPHFAKSALARYAPADFIALVERHGIAYHEKTLGQLFCDGS
CCEEEEEEEEECCCEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCC
AKQVVAMLLDECARGGVDVRCGQPVRQVTHADGRFAVRFGDLDFAAPNLVIATGGPSIPK
HHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCC
MGASGFAYDLARQFGLKVVEPRPALVPLTLGGDDVLFRELSGVATPVEARAGKAAFREAA
CCCCCHHHHHHHHHCCEEECCCCCEEEEEECCCHHHHHHHHCCCCCHHHHCCHHHHHHHH
LFTHKGLSGPAILQVSSYWRHGEPVTIDFLPDAAPGWLLGAKRARPRATLASALALPDRL
HHHCCCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCEECCCCCCCHHHHHHHHHCHHHH
AQTLADRLALPGELGAQTDRKLADAEARLKRWTFRPNGTEGFAKAEVTAGGISTANLSSQ
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCEECCCCHH
TMMAKCVPGLYAVGEAVDVTGWLGGYNFQWAWASGHAAGQAL
HHHHHHCCCHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]