BacMap

Definition	Sphingopyxis alaskensis RB2256, complete genome.
Accession	NC_008048
Length	3,345,170

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The map label for this gene is deaD [H]

Identifier: 103487316

GI number: 103487316

Start: 1926744

End: 1928576

Strand: Direct

Name: deaD [H]

Synonym: Sala_1832

Alternate gene names: 103487316

Gene position: 1926744-1928576 (Clockwise)

Preceding gene: 103487315

Following gene: 103487317

Centisome position: 57.6

GC content: 70.49

Gene sequence:

>1833_bases
ATGCCTTTCGAACATCTTTCGCCCGTTCTTGCGGACGCCCTCGCCGCGCGCGGCTATGAAGCGCTCACCCCCGTCCAGTT
GCAGGTCACTGAGGCCGAAGCCAAGGGCCGCGACCTGCTCGTCTCGGCGCAGACCGGCTCGGGCAAGACCGTCGCCTTCG
GGCTGGCGATGGCCGACGAGCTGATCGAGGACGGCCGCCTGCCCTTCGCCACCTCGCCGCTTGCGCTGATCGTCGCGCCG
ACGCGCGAACTCGCATTGCAGGTCAGCCGCGAGCTCGGCTGGCTCTATGCCAGGGCCGGGGCGCGCATCGCGACCTGCGT
CGGCGGCATGGACGCCAGCAAGGAACGCCGCGCGCTGAACCAGGGCGTGCAGATCGTCGTCGGTACGCCGGGCCGACTGC
GCGACCATCTCGAGCGCGGGGCGCTCGACCTTGCCGCGCTGCGCGTCGCGGTGCTCGACGAGGCCGACGAAATGCTCGAC
ATGGGCTTTCGCGACGATCTGGAGGAAATCCTCGACGCGACCCCCGAAACGCGCCGCACGCTCCTGTTTTCGGCAACGAT
CCCCAAACCGATCGTCCAGCTGGCCAAGCGTTACCAGCGCGATGCGCTGCGCATCTCGACCGTCGGCGAAGACCGCGGTC
ATGGCGACATCGCCTATCAGGCGGTGACGGTCGCCCCCGCCGACATCGAGGGCGCGGTGGTCAACCTGCTCCGCCTGCAC
GATGCCGAAACGGCGATGCTGTTCTGCGCGACGCGCGACAATGTTCGCCGTCTGCACGCCAGCCTTGTCGAGCGCGGGTT
CGCCGCCGTGGCGCTCTCGGGCGAGCATAGCCAGAATGAACGAAATCAGGCGTTGCAGGCGCTGCGTGATCGCCGCGCCA
AGGTCTGCGTTGCGACCGACGTCGCCGCGCGCGGCATCGATCTGCCGACGCTCAGCCTGGTCATCCACGTCGAAATCCCG
CGCGATGCCGAAGCGCTCCAGCACCGGTCGGGCCGCACTGGCCGCGCGGGCAAAAAGGGCACCGCGGTGATCATCGTCCC
CTATCCGCGCCGCCGCCGCGTCGACGGGATGCTGCGCGGCGCGCGGATCAACGCCGAATGGATGGACGCGCCGACCGCAG
CCGACGTCCGGCAAAAGGATCAGGAACGGCTGATCGAAAAGCTGCTGGCCCCCGTCGAGCACGAGCCCGAAGATCTGGCG
CTGGCGCAGCGGCTGATGGCCGAGCGCACGCCCGAAGACATCGCCGCATCGCTCGTCCGCGCGCACCGCGCGCTGATGCC
GCCGCCCGAGGATCTGCTCGACAACGGGCCGCGCGGCCGTGATGCCACGGGCCGTCCCGAGCGCGGCGAGCGTTTTGAGC
GGCCGGAACGCGGCGGCGACCGCCGCGAGGGGTTCGAGGACGCCGTCTGGTTCCGCCTGAACATCGGCCGCCACCAGAAT
GCCGATCCGCGCTGGATCCTGCCTTTGCTGTGTCGCCGCGGCCATGTAAGCAAGAATGAGATCGGCGCGATCCGCATCGG
GCCGAAGGAAACGATGTTCAACATCCCGCGCGCGATCGCCGACCGTTTTGCCGAAGCCGTGGTGCGCACCGCGAACCAGG
ATGGCGAGGACGACAGCGGGGTCGCGATCACCCCCGCGCCCGATGGGCCGACCTGGCCGCCGCGCCGCGACAAGGGCTCG
GGCGACCGGGCGCCGCGCAGCACGCTCGGTCGGGCGCCCGGCGGCGAGCGTTCGGGTCCGCGCGGGCCGCGTGGTCCGGC
CGGACCGGGCGGCAACGAACGCTACAAGCCCAAGCCCTACGGCCAGCGCAGCCCGCGCCGTCCGGCGAAGTAA

Upstream 100 bases:

>100_bases
TCCATACGCCGATGCTGCACCCCTGGCGGTGGACCCCGGATCAAGTCCGGGGTGACGAATAAACGGCGATGCAGCGCCGC
ACAGGATAAGAAGAACCACA

Downstream 100 bases:

>100_bases
CACGATAAGCCCCTCCCCTGAAGGGGAGGGGCCGTGAGACTTGGTCCGGCGCAGCCGGGCCTTTAGTCGAGCGGGGTGGG
GGCCATCGGCCTTGCGCAAC

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MPFEHLSPVLADALAARGYEALTPVQLQVTEAEAKGRDLLVSAQTGSGKTVAFGLAMADELIEDGRLPFATSPLALIVAP
TRELALQVSRELGWLYARAGARIATCVGGMDASKERRALNQGVQIVVGTPGRLRDHLERGALDLAALRVAVLDEADEMLD
MGFRDDLEEILDATPETRRTLLFSATIPKPIVQLAKRYQRDALRISTVGEDRGHGDIAYQAVTVAPADIEGAVVNLLRLH
DAETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNQALQALRDRRAKVCVATDVAARGIDLPTLSLVIHVEIP
RDAEALQHRSGRTGRAGKKGTAVIIVPYPRRRRVDGMLRGARINAEWMDAPTAADVRQKDQERLIEKLLAPVEHEPEDLA
LAQRLMAERTPEDIAASLVRAHRALMPPPEDLLDNGPRGRDATGRPERGERFERPERGGDRREGFEDAVWFRLNIGRHQN
ADPRWILPLLCRRGHVSKNEIGAIRIGPKETMFNIPRAIADRFAEAVVRTANQDGEDDSGVAITPAPDGPTWPPRRDKGS
GDRAPRSTLGRAPGGERSGPRGPRGPAGPGGNERYKPKPYGQRSPRRPAK

Sequences:

>Translated_610_residues
MPFEHLSPVLADALAARGYEALTPVQLQVTEAEAKGRDLLVSAQTGSGKTVAFGLAMADELIEDGRLPFATSPLALIVAP
TRELALQVSRELGWLYARAGARIATCVGGMDASKERRALNQGVQIVVGTPGRLRDHLERGALDLAALRVAVLDEADEMLD
MGFRDDLEEILDATPETRRTLLFSATIPKPIVQLAKRYQRDALRISTVGEDRGHGDIAYQAVTVAPADIEGAVVNLLRLH
DAETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNQALQALRDRRAKVCVATDVAARGIDLPTLSLVIHVEIP
RDAEALQHRSGRTGRAGKKGTAVIIVPYPRRRRVDGMLRGARINAEWMDAPTAADVRQKDQERLIEKLLAPVEHEPEDLA
LAQRLMAERTPEDIAASLVRAHRALMPPPEDLLDNGPRGRDATGRPERGERFERPERGGDRREGFEDAVWFRLNIGRHQN
ADPRWILPLLCRRGHVSKNEIGAIRIGPKETMFNIPRAIADRFAEAVVRTANQDGEDDSGVAITPAPDGPTWPPRRDKGS
GDRAPRSTLGRAPGGERSGPRGPRGPAGPGGNERYKPKPYGQRSPRRPAK
>Mature_609_residues
PFEHLSPVLADALAARGYEALTPVQLQVTEAEAKGRDLLVSAQTGSGKTVAFGLAMADELIEDGRLPFATSPLALIVAPT
RELALQVSRELGWLYARAGARIATCVGGMDASKERRALNQGVQIVVGTPGRLRDHLERGALDLAALRVAVLDEADEMLDM
GFRDDLEEILDATPETRRTLLFSATIPKPIVQLAKRYQRDALRISTVGEDRGHGDIAYQAVTVAPADIEGAVVNLLRLHD
AETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNQALQALRDRRAKVCVATDVAARGIDLPTLSLVIHVEIPR
DAEALQHRSGRTGRAGKKGTAVIIVPYPRRRRVDGMLRGARINAEWMDAPTAADVRQKDQERLIEKLLAPVEHEPEDLAL
AQRLMAERTPEDIAASLVRAHRALMPPPEDLLDNGPRGRDATGRPERGERFERPERGGDRREGFEDAVWFRLNIGRHQNA
DPRWILPLLCRRGHVSKNEIGAIRIGPKETMFNIPRAIADRFAEAVVRTANQDGEDDSGVAITPAPDGPTWPPRRDKGSG
DRAPRSTLGRAPGGERSGPRGPRGPAGPGGNERYKPKPYGQRSPRRPAK

Specific function: Has a helix-destabilizing activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=33.0788804071247, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13129006, Length=415, Percent_Identity=33.7349397590361, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI20149629, Length=342, Percent_Identity=33.6257309941521, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI45446747, Length=330, Percent_Identity=35.4545454545455, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI45446743, Length=330, Percent_Identity=35.4545454545455, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI21071032, Length=345, Percent_Identity=35.9420289855072, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI41327773, Length=363, Percent_Identity=32.5068870523416, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=34.7457627118644, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=34.7457627118644, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=34.7457627118644, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI301171467, Length=346, Percent_Identity=34.971098265896, Blast_Score=193, Evalue=5e-49,
Organism=Homo sapiens, GI87196351, Length=346, Percent_Identity=34.971098265896, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=34.7457627118644, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI301171475, Length=342, Percent_Identity=35.0877192982456, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI7661920, Length=336, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=34.7578347578348, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=34.7578347578348, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI169881239, Length=346, Percent_Identity=34.6820809248555, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI13514809, Length=346, Percent_Identity=34.6820809248555, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI224593278, Length=413, Percent_Identity=32.4455205811138, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI188035877, Length=394, Percent_Identity=30.7106598984772, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI4758138, Length=344, Percent_Identity=34.593023255814, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI41327771, Length=374, Percent_Identity=31.283422459893, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI31542656, Length=356, Percent_Identity=34.8314606741573, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI83700235, Length=328, Percent_Identity=33.2317073170732, Blast_Score=169, Evalue=9e-42,
Organism=Homo sapiens, GI222352149, Length=340, Percent_Identity=30.8823529411765, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=33.8068181818182, Blast_Score=166, Evalue=8e-41,
Organism=Homo sapiens, GI41327776, Length=342, Percent_Identity=30.4093567251462, Blast_Score=164, Evalue=3e-40,
Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=31.7808219178082, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=32.4175824175824, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI38327634, Length=383, Percent_Identity=30.8093994778068, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI164664518, Length=342, Percent_Identity=28.0701754385965, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI256223453, Length=361, Percent_Identity=30.4709141274238, Blast_Score=159, Evalue=8e-39,
Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=29.1907514450867, Blast_Score=158, Evalue=2e-38,
Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=29.4797687861272, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=29.7687861271676, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=29.7687861271676, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=33.0578512396694, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI51094101, Length=348, Percent_Identity=31.3218390804598, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI164419743, Length=348, Percent_Identity=31.3218390804598, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI17505907, Length=389, Percent_Identity=27.7634961439589, Blast_Score=145, Evalue=2e-34,
Organism=Homo sapiens, GI6005743, Length=356, Percent_Identity=33.7078651685393, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI62241022, Length=322, Percent_Identity=34.472049689441, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=34.472049689441, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI8922886, Length=356, Percent_Identity=33.7078651685393, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI38569505, Length=349, Percent_Identity=30.945558739255, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI38569503, Length=346, Percent_Identity=31.2138728323699, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=30.2631578947368, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI154759257, Length=426, Percent_Identity=28.169014084507, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI4826686, Length=341, Percent_Identity=27.2727272727273, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=27.4611398963731, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=33.9285714285714, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI256773275, Length=378, Percent_Identity=26.7195767195767, Blast_Score=102, Evalue=1e-21,
Organism=Escherichia coli, GI87082221, Length=555, Percent_Identity=33.8738738738739, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1787605, Length=379, Percent_Identity=38.2585751978892, Blast_Score=219, Evalue=4e-58,
Organism=Escherichia coli, GI1787016, Length=351, Percent_Identity=35.6125356125356, Blast_Score=187, Evalue=2e-48,
Organism=Escherichia coli, GI1788930, Length=340, Percent_Identity=38.5294117647059, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1790214, Length=342, Percent_Identity=32.1637426900585, Blast_Score=168, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17555296, Length=342, Percent_Identity=35.0877192982456, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=330, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17507121, Length=336, Percent_Identity=34.2261904761905, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71995724, Length=336, Percent_Identity=34.2261904761905, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71999646, Length=343, Percent_Identity=32.9446064139942, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI71999644, Length=343, Percent_Identity=32.9446064139942, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=34.4729344729345, Blast_Score=185, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17507945, Length=335, Percent_Identity=34.0298507462687, Blast_Score=183, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=34.180790960452, Blast_Score=183, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=34.180790960452, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=34.180790960452, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=33.6043360433604, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI115533224, Length=328, Percent_Identity=32.9268292682927, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71995718, Length=356, Percent_Identity=33.9887640449438, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17537549, Length=358, Percent_Identity=32.6815642458101, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI86570094, Length=342, Percent_Identity=34.2105263157895, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17552114, Length=346, Percent_Identity=28.9017341040462, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=31.2138728323699, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17507877, Length=364, Percent_Identity=31.043956043956, Blast_Score=167, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=325, Percent_Identity=32.3076923076923, Blast_Score=162, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=31.1170212765957, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17507881, Length=353, Percent_Identity=31.1614730878187, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=30.0261096605744, Blast_Score=159, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17507879, Length=364, Percent_Identity=29.9450549450549, Blast_Score=158, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI115532548, Length=338, Percent_Identity=33.4319526627219, Blast_Score=158, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI115532546, Length=338, Percent_Identity=33.1360946745562, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17505370, Length=385, Percent_Identity=29.0909090909091, Blast_Score=149, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17507641, Length=402, Percent_Identity=29.6019900497512, Blast_Score=148, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17556951, Length=391, Percent_Identity=29.156010230179, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17536099, Length=335, Percent_Identity=31.044776119403, Blast_Score=142, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17536101, Length=335, Percent_Identity=31.044776119403, Blast_Score=142, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI17536103, Length=335, Percent_Identity=30.7462686567164, Blast_Score=142, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=382, Percent_Identity=30.1047120418848, Blast_Score=141, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17508543, Length=354, Percent_Identity=31.0734463276836, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=328, Percent_Identity=28.9634146341463, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=26.9129287598945, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71990816, Length=357, Percent_Identity=27.7310924369748, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=33.8235294117647, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25148203, Length=385, Percent_Identity=23.6363636363636, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI25148291, Length=349, Percent_Identity=24.3553008595989, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17566630, Length=332, Percent_Identity=26.2048192771084, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71987152, Length=85, Percent_Identity=38.8235294117647, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=35.4223433242507, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6324778, Length=349, Percent_Identity=37.2492836676218, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6324217, Length=339, Percent_Identity=35.693215339233, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6321360, Length=350, Percent_Identity=33.7142857142857, Blast_Score=193, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=35.6521739130435, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320041, Length=334, Percent_Identity=30.8383233532934, Blast_Score=177, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=347, Percent_Identity=31.9884726224784, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=32.112676056338, Blast_Score=168, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6320224, Length=345, Percent_Identity=30.4347826086957, Blast_Score=167, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6320449, Length=332, Percent_Identity=33.433734939759, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=30.46875, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6322912, Length=314, Percent_Identity=31.5286624203822, Blast_Score=160, Evalue=8e-40,
Organism=Saccharomyces cerevisiae, GI6322323, Length=314, Percent_Identity=31.5286624203822, Blast_Score=160, Evalue=8e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=451, Percent_Identity=28.3813747228381, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6323947, Length=356, Percent_Identity=31.4606741573034, Blast_Score=153, Evalue=7e-38,
Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=30.46875, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6324620, Length=327, Percent_Identity=31.8042813455657, Blast_Score=146, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320119, Length=348, Percent_Identity=29.5977011494253, Blast_Score=146, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=27.3838630806846, Blast_Score=143, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=27.8215223097113, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6321267, Length=394, Percent_Identity=27.1573604060914, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6323306, Length=408, Percent_Identity=25.7352941176471, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6320173, Length=257, Percent_Identity=28.4046692607004, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6324366, Length=355, Percent_Identity=24.5070422535211, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322876, Length=145, Percent_Identity=33.1034482758621, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=33.8666666666667, Blast_Score=202, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24662330, Length=340, Percent_Identity=33.8235294117647, Blast_Score=201, Evalue=2e-51,
Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=32.8840970350404, Blast_Score=201, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24585582, Length=345, Percent_Identity=33.6231884057971, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI17977678, Length=350, Percent_Identity=38, Blast_Score=196, Evalue=5e-50,
Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=32.2857142857143, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24645031, Length=345, Percent_Identity=32.7536231884058, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=31.5789473684211, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI18857967, Length=353, Percent_Identity=32.5779036827195, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24644479, Length=345, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24644483, Length=345, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI281361218, Length=345, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24644481, Length=345, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=3e-44,
Organism=Drosophila melanogaster, GI21355075, Length=343, Percent_Identity=31.7784256559767, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24644487, Length=345, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI45551833, Length=345, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24644485, Length=345, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24584994, Length=373, Percent_Identity=33.5120643431635, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI17136814, Length=358, Percent_Identity=33.5195530726257, Blast_Score=175, Evalue=7e-44,
Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=31.3019390581717, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=31.3019390581717, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=31.3019390581717, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=31.3019390581717, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI21356161, Length=365, Percent_Identity=31.2328767123288, Blast_Score=169, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=28.6567164179104, Blast_Score=165, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=28.6567164179104, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI281365720, Length=303, Percent_Identity=33.993399339934, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28575014, Length=339, Percent_Identity=31.5634218289086, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28571808, Length=343, Percent_Identity=31.1953352769679, Blast_Score=158, Evalue=1e-38,
Organism=Drosophila melanogaster, GI28571809, Length=343, Percent_Identity=31.1953352769679, Blast_Score=158, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=30, Blast_Score=152, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=30, Blast_Score=152, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=30, Blast_Score=152, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24666101, Length=352, Percent_Identity=31.25, Blast_Score=149, Evalue=8e-36,
Organism=Drosophila melanogaster, GI18859659, Length=483, Percent_Identity=28.1573498964803, Blast_Score=143, Evalue=4e-34,
Organism=Drosophila melanogaster, GI28571338, Length=483, Percent_Identity=28.1573498964803, Blast_Score=143, Evalue=4e-34,
Organism=Drosophila melanogaster, GI17647335, Length=341, Percent_Identity=29.0322580645161, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24642822, Length=362, Percent_Identity=28.1767955801105, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI20130173, Length=422, Percent_Identity=26.5402843601896, Blast_Score=131, Evalue=2e-30,
Organism=Drosophila melanogaster, GI21355559, Length=360, Percent_Identity=30.5555555555556, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=27.190332326284, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24643725, Length=383, Percent_Identity=24.0208877284595, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=29.1866028708134, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI19920478, Length=353, Percent_Identity=25.2124645892351, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 66712; Mature: 66580

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFEHLSPVLADALAARGYEALTPVQLQVTEAEAKGRDLLVSAQTGSGKTVAFGLAMADE
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEHHHHHHH
LIEDGRLPFATSPLALIVAPTRELALQVSRELGWLYARAGARIATCVGGMDASKERRALN
HHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHH
QGVQIVVGTPGRLRDHLERGALDLAALRVAVLDEADEMLDMGFRDDLEEILDATPETRRT
CCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHE
LLFSATIPKPIVQLAKRYQRDALRISTVGEDRGHGDIAYQAVTVAPADIEGAVVNLLRLH
EEEECCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHC
DAETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNQALQALRDRRAKVCVATD
CCCEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEH
VAARGIDLPTLSLVIHVEIPRDAEALQHRSGRTGRAGKKGTAVIIVPYPRRRRVDGMLRG
HHHCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHC
ARINAEWMDAPTAADVRQKDQERLIEKLLAPVEHEPEDLALAQRLMAERTPEDIAASLVR
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
AHRALMPPPEDLLDNGPRGRDATGRPERGERFERPERGGDRREGFEDAVWFRLNIGRHQN
HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCC
ADPRWILPLLCRRGHVSKNEIGAIRIGPKETMFNIPRAIADRFAEAVVRTANQDGEDDSG
CCCCCHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VAITPAPDGPTWPPRRDKGSGDRAPRSTLGRAPGGERSGPRGPRGPAGPGGNERYKPKPY
EEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQRSPRRPAK
CCCCCCCCCC
>Mature Secondary Structure 
PFEHLSPVLADALAARGYEALTPVQLQVTEAEAKGRDLLVSAQTGSGKTVAFGLAMADE
CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEHHHHHHH
LIEDGRLPFATSPLALIVAPTRELALQVSRELGWLYARAGARIATCVGGMDASKERRALN
HHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHH
QGVQIVVGTPGRLRDHLERGALDLAALRVAVLDEADEMLDMGFRDDLEEILDATPETRRT
CCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHE
LLFSATIPKPIVQLAKRYQRDALRISTVGEDRGHGDIAYQAVTVAPADIEGAVVNLLRLH
EEEECCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHC
DAETAMLFCATRDNVRRLHASLVERGFAAVALSGEHSQNERNQALQALRDRRAKVCVATD
CCCEEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEH
VAARGIDLPTLSLVIHVEIPRDAEALQHRSGRTGRAGKKGTAVIIVPYPRRRRVDGMLRG
HHHCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHC
ARINAEWMDAPTAADVRQKDQERLIEKLLAPVEHEPEDLALAQRLMAERTPEDIAASLVR
CCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
AHRALMPPPEDLLDNGPRGRDATGRPERGERFERPERGGDRREGFEDAVWFRLNIGRHQN
HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCC
ADPRWILPLLCRRGHVSKNEIGAIRIGPKETMFNIPRAIADRFAEAVVRTANQDGEDDSG
CCCCCHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VAITPAPDGPTWPPRRDKGSGDRAPRSTLGRAPGGERSGPRGPRGPAGPGGNERYKPKPY
EEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQRSPRRPAK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]