| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487314
Identifier: 103487314
GI number: 103487314
Start: 1925239
End: 1925418
Strand: Direct
Name: 103487314
Synonym: Sala_1830
Alternate gene names: NA
Gene position: 1925239-1925418 (Clockwise)
Preceding gene: 103487311
Following gene: 103487315
Centisome position: 57.55
GC content: 62.22
Gene sequence:
>180_bases ATGAAAGACCGCTTTGAACGCCACAAGCAGCCGTGGACCGCGGCGGAGATCGACAAGCTGCACACGCTCGCGAAAAAGGG CATGGCGATGAAAGCGATCGCCAGGGCGCTGACGCGCAGCGAGGAATCGGTCAAGCAACGCGCCAAGGCCGATGGGCTGG CGATCGCAAAGCTGCACTGA
Upstream 100 bases:
>100_bases GAGAATCTCCTTTGTGTATTATATTAATAACACACATCCTGTCCGCCTGTCCAGAGGCGCCGCCATCTTGTCGCCACCTT CGTGCGCCAGAGCGCGCCGC
Downstream 100 bases:
>100_bases CGCCTGCGTGGCAGTATTCGATTATGACGCCATCGTGCTGGGTGCCGGCGCGGCCGGGCTGATGTGCGCCGCGGTCGCGG GGCAGCGGGGGCGGCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MKDRFERHKQPWTAAEIDKLHTLAKKGMAMKAIARALTRSEESVKQRAKADGLAIAKLH
Sequences:
>Translated_59_residues MKDRFERHKQPWTAAEIDKLHTLAKKGMAMKAIARALTRSEESVKQRAKADGLAIAKLH >Mature_59_residues MKDRFERHKQPWTAAEIDKLHTLAKKGMAMKAIARALTRSEESVKQRAKADGLAIAKLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6684; Mature: 6684
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDRFERHKQPWTAAEIDKLHTLAKKGMAMKAIARALTRSEESVKQRAKADGLAIAKLH CCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MKDRFERHKQPWTAAEIDKLHTLAKKGMAMKAIARALTRSEESVKQRAKADGLAIAKLH CCCHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA