| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487125
Identifier: 103487125
GI number: 103487125
Start: 1722635
End: 1723051
Strand: Direct
Name: 103487125
Synonym: Sala_1640
Alternate gene names: NA
Gene position: 1722635-1723051 (Clockwise)
Preceding gene: 103487124
Following gene: 103487127
Centisome position: 51.5
GC content: 60.43
Gene sequence:
>417_bases TTGGATACCGCTGCCAAGAACAGGGCCGTGCTGCAACATGCCTTCGCCGAAACCGCGAAGGGTAATGGTCGCCCCTTTGT CGAGATGATGGCTGACGATGTCGTATGGACGATCATCGGCACGACGAGCTGGTCGCGCCGCTATTCGGGCAAGCAGGCTG TGATCCGTGACTTGCCGGGTCCGCTCGCCGCCAATTTTGACGGGCCGAATATCGTTACCGCCGAGCGCTTCATCGTCGAA GGTGATCTGGCGGTCGTCGAGGGACGCAATCACAGCACCACCAGGCGCGGCGAAGCCTATGCCAATCGCTATAGCTGGAC GTTCCGCTTCCATACCGGAAAAGTGGCGGAGATCACCGAATATACCGACACCGATCTGATCGCGCGGGTGCTCGACCCGC TCCCTGCTCAGAGCTGA
Upstream 100 bases:
>100_bases GCGATCCCGCCCTTGCACGGCGCCCTCCTCAAGAATGAGCAGGATGTGATGCTATTCGAAAAGCTCGCCTTCATGGCGCG GCGCCAGGGGGGCTGAGCGC
Downstream 100 bases:
>100_bases TAGGCCACCTCGACGTCGCCCCAGCGGCGGCCGCCGATGATCGCGGGCATATAGACGTTGCGCACGGTCAGATAATTGAT CCCGTCGCCTTCCTGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Ketosteroid Isomerase-Related Protein-Like Protein; NTF2 Family Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDTAAKNRAVLQHAFAETAKGNGRPFVEMMADDVVWTIIGTTSWSRRYSGKQAVIRDLPGPLAANFDGPNIVTAERFIVE GDLAVVEGRNHSTTRRGEAYANRYSWTFRFHTGKVAEITEYTDTDLIARVLDPLPAQS
Sequences:
>Translated_138_residues MDTAAKNRAVLQHAFAETAKGNGRPFVEMMADDVVWTIIGTTSWSRRYSGKQAVIRDLPGPLAANFDGPNIVTAERFIVE GDLAVVEGRNHSTTRRGEAYANRYSWTFRFHTGKVAEITEYTDTDLIARVLDPLPAQS >Mature_138_residues MDTAAKNRAVLQHAFAETAKGNGRPFVEMMADDVVWTIIGTTSWSRRYSGKQAVIRDLPGPLAANFDGPNIVTAERFIVE GDLAVVEGRNHSTTRRGEAYANRYSWTFRFHTGKVAEITEYTDTDLIARVLDPLPAQS
Specific function: Unknown
COG id: COG3631
COG function: function code R; Ketosteroid isomerase-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15315; Mature: 15315
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTAAKNRAVLQHAFAETAKGNGRPFVEMMADDVVWTIIGTTSWSRRYSGKQAVIRDLPG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEEECCCCCHHCCCCHHHHHHCCC PLAANFDGPNIVTAERFIVEGDLAVVEGRNHSTTRRGEAYANRYSWTFRFHTGKVAEITE CCCCCCCCCCEEEECEEEEECCEEEEECCCCCCCCCCCHHHCEEEEEEEECCCCEEEECC YTDTDLIARVLDPLPAQS CCCHHHHHHHHCCCCCCC >Mature Secondary Structure MDTAAKNRAVLQHAFAETAKGNGRPFVEMMADDVVWTIIGTTSWSRRYSGKQAVIRDLPG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEEECCCCCHHCCCCHHHHHHCCC PLAANFDGPNIVTAERFIVEGDLAVVEGRNHSTTRRGEAYANRYSWTFRFHTGKVAEITE CCCCCCCCCCEEEECEEEEECCEEEEECCCCCCCCCCCHHHCEEEEEEEECCCCEEEECC YTDTDLIARVLDPLPAQS CCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA