Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487124

Identifier: 103487124

GI number: 103487124

Start: 1721785

End: 1722630

Strand: Direct

Name: 103487124

Synonym: Sala_1639

Alternate gene names: NA

Gene position: 1721785-1722630 (Clockwise)

Preceding gene: 103487123

Following gene: 103487125

Centisome position: 51.47

GC content: 60.76

Gene sequence:

>846_bases
ATGCGTTTCGAAGGAACCAGCGCCTATATCGCCACCGACGACCTCAAGGTCGCGGTCAACGCCGCGACGCTGCTCCGCCG
CCCCCTTCTCGTGAAGGGCGAACCGGGCACGGGCAAGACCGTGCTCGCCGAGGAGATCGCGAAAGCATTCGACGCGCCGC
TGATCACCTGGAACATCAAATCGACGACCAAGGCGCAGCAAGGGCTTTACGAATATGATGCGGTGGCGCGCCTGCGCGAC
GGGCAACTTGGCGAAGAGCGCGTCCACGACATCCGCAATTACATCAAGCGCGGAAAATTGTGGGAAGCCTTCACCTCGCC
CAAGCTCCCCGTTCTGCTGATCGACGAGATCGACAAGGCCGACATCGAGTTTCCGAACGATCTGCTCCAGGAGCTCGATC
GCATGGCCTTTCATGTCTATGAGACCGACGAGACGATCACCGCCCAAGAGCGCCCGATCGTCGTCATCACCTCGAACAAT
GAAAAGGAGCTGCCCGACGCCTTCCTGCGCCGCTGCTTCTTCCACTATATCAAATTCCCCGACCGCGACACGATGGCGGA
AATCGTCGAGGTCCACTTCCCCGGCATCCAGAAGACGCTGGTGAGCCGCGCGATGGACATTTTCTACGACGTTCGCGAGG
TGCCGGGGCTCAAGAAAAAGCCGTCGACGAGCGAACTGATCGACTGGCTCAAGCTGCTGCTCGCCGAGGATATGCCGCTC
GAAGTGCTGCAGAACCGCGATGTCGGCAAGGCGATCCCGCCCTTGCACGGCGCCCTCCTCAAGAATGAGCAGGATGTGAT
GCTATTCGAAAAGCTCGCCTTCATGGCGCGGCGCCAGGGGGGCTGA

Upstream 100 bases:

>100_bases
GCCCTGCCATGCCGGAGCCATGGCGCCTGTTTGCTTGCACCCTCCCCCTCCCCCCGCTATGCCTGCTTGACGTTCACGTT
AAGGGAAAGGCTCTCCGTCC

Downstream 100 bases:

>100_bases
GCGCTTGGATACCGCTGCCAAGAACAGGGCCGTGCTGCAACATGCCTTCGCCGAAACCGCGAAGGGTAATGGTCGCCCCT
TTGTCGAGATGATGGCTGAC

Product: ATPase

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA_5 ATPase; AAA ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; Aaa ATPase; Oligopeptide ABC Transporter; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; MoxR-Like ATPase CoxD; ATPase Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIKSTTKAQQGLYEYDAVARLRD
GQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKADIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNN
EKELPDAFLRRCFFHYIKFPDRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL
EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG

Sequences:

>Translated_281_residues
MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIKSTTKAQQGLYEYDAVARLRD
GQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKADIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNN
EKELPDAFLRRCFFHYIKFPDRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL
EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG
>Mature_281_residues
MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIKSTTKAQQGLYEYDAVARLRD
GQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKADIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNN
EKELPDAFLRRCFFHYIKFPDRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL
EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32040; Mature: 32040

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIK
CCCCCCEEEEEECCCCEEHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECC
STTKAQQGLYEYDAVARLRDGQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCC
DIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNNEKELPDAFLRRCFFHYIKFP
CCCCCHHHHHHHHHHHEEEEECCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
DRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCH
EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG
HHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIK
CCCCCCEEEEEECCCCEEHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECC
STTKAQQGLYEYDAVARLRDGQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCC
DIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNNEKELPDAFLRRCFFHYIKFP
CCCCCHHHHHHHHHHHEEEEECCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
DRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCH
EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG
HHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA