| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mreB [H]
Identifier: 103487112
GI number: 103487112
Start: 1707402
End: 1708448
Strand: Direct
Name: mreB [H]
Synonym: Sala_1627
Alternate gene names: 103487112
Gene position: 1707402-1708448 (Clockwise)
Preceding gene: 103487110
Following gene: 103487113
Centisome position: 51.04
GC content: 65.43
Gene sequence:
>1047_bases ATGTCCTTCTTTTCCCGCTGGTTCAAATTCAATTCGCAAGACATGGCCATCGACCTCGGCACCGCGAACACGGTCGTCTA TGTGCGCGGCAAGGGCATCGTGCTCAACGAACCTTCGGTCGTCGCGGTCGAGACGCTGAACGGGATCAAGCGGGTCAAGG CGGTCGGCGACGACGCCAAGCTGATGATGGGCAAGACCCCCGACAGCATCGAGGCGATCCGCCCGCTGCGCGATGGCGTG ATTGCCGACATCGACGTCGCCGAACAGATGATCAAGCATTTCATCACCAAGGTGCACGGCGGCAAGCCCAACGCCTTCCG CAGCCCCGAAATCGTCATCTGCGTTCCCTCGGGCTCGACGAGCGTCGAACGCCGTGCGATCCGCGACGCCGCATCGAACG CGGGCGCGAGCGAAGTGTGGCTGATCGAGGAGCCGATGGCCGCCGCGATCGGCGCCGACATGCCGGTGACCGAACCCATC GGGTCGATGGTCGTCGACATCGGCGGCGGCACCACCGAAGTCGCGGTGCTGTCGCTTCGCGGTCTCGCTTACACCACCTC GGTCCGCGCCGGCGGCGACAAGATGGACGAGGCGATCGTCTCCTATGTCCGCCGCCACCATAATCTGCTGATCGGCGAAT CGACCGCCGAACGGATCAAGAAGGATTTCGGCATCGCGCGCATCCCCGCCGACGGCGTGGGCCTGACGATCCACATCAAG GGCCGCGACCTCGTCAACGGGGTGCCCAAGGAAATCTCGATCAACCAGGCGCAGATCGCCGAGGCGCTGTCCGAACCGAT CGGCACGATCGTCGAGGGCGTGCGCATCGCGCTCGAAAACACCGCACCCGAACTCGCCGCCGACATCGTCGATCAGGGGA TCGTGCTGACCGGCGGCGGCGCGCTGATCGCCGAACTCGACGAATTGTTGCGCGATGCGACCGGCCTGCCGGTGACGGTC GCCGACGATCCGCTGACCTGCGTTGCGATCGGCACCGGTCGCGCGATGGAAGACCCCGCCTTCCGCGGCGTGCTCCAACA AGCCTGA
Upstream 100 bases:
>100_bases CCCCAGATTTGGTCCTGTTGTCGGACGGCAACGAGCAATTTATGACGACGGTGGGCGGCCCGTTCGGACGCCGCGCCGTC GATGACAGGAACTATAGCTG
Downstream 100 bases:
>100_bases TCGGGTAGCATCGCGTCGTGGTCCGCCCGGCACATCGACGTCCGGGGCAATCCCGAAAGGCCCAGTACAGCCTGTTCGTC GCCTATGTCATCGCGGTGAC
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSFFSRWFKFNSQDMAIDLGTANTVVYVRGKGIVLNEPSVVAVETLNGIKRVKAVGDDAKLMMGKTPDSIEAIRPLRDGV IADIDVAEQMIKHFITKVHGGKPNAFRSPEIVICVPSGSTSVERRAIRDAASNAGASEVWLIEEPMAAAIGADMPVTEPI GSMVVDIGGGTTEVAVLSLRGLAYTTSVRAGGDKMDEAIVSYVRRHHNLLIGESTAERIKKDFGIARIPADGVGLTIHIK GRDLVNGVPKEISINQAQIAEALSEPIGTIVEGVRIALENTAPELAADIVDQGIVLTGGGALIAELDELLRDATGLPVTV ADDPLTCVAIGTGRAMEDPAFRGVLQQA
Sequences:
>Translated_348_residues MSFFSRWFKFNSQDMAIDLGTANTVVYVRGKGIVLNEPSVVAVETLNGIKRVKAVGDDAKLMMGKTPDSIEAIRPLRDGV IADIDVAEQMIKHFITKVHGGKPNAFRSPEIVICVPSGSTSVERRAIRDAASNAGASEVWLIEEPMAAAIGADMPVTEPI GSMVVDIGGGTTEVAVLSLRGLAYTTSVRAGGDKMDEAIVSYVRRHHNLLIGESTAERIKKDFGIARIPADGVGLTIHIK GRDLVNGVPKEISINQAQIAEALSEPIGTIVEGVRIALENTAPELAADIVDQGIVLTGGGALIAELDELLRDATGLPVTV ADDPLTCVAIGTGRAMEDPAFRGVLQQA >Mature_347_residues SFFSRWFKFNSQDMAIDLGTANTVVYVRGKGIVLNEPSVVAVETLNGIKRVKAVGDDAKLMMGKTPDSIEAIRPLRDGVI ADIDVAEQMIKHFITKVHGGKPNAFRSPEIVICVPSGSTSVERRAIRDAASNAGASEVWLIEEPMAAAIGADMPVTEPIG SMVVDIGGGTTEVAVLSLRGLAYTTSVRAGGDKMDEAIVSYVRRHHNLLIGESTAERIKKDFGIARIPADGVGLTIHIKG RDLVNGVPKEISINQAQIAEALSEPIGTIVEGVRIALENTAPELAADIVDQGIVLTGGGALIAELDELLRDATGLPVTVA DDPLTCVAIGTGRAMEDPAFRGVLQQA
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Homo sapiens, GI34419635, Length=375, Percent_Identity=28.2666666666667, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87082236, Length=339, Percent_Identity=58.1120943952802, Blast_Score=380, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17507981, Length=379, Percent_Identity=25.5936675461741, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 36738; Mature: 36606
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFSRWFKFNSQDMAIDLGTANTVVYVRGKGIVLNEPSVVAVETLNGIKRVKAVGDDAK CCHHHHHHHCCCCCEEEEECCCCEEEEEECCEEEECCCCEEEEHHHHHHHHHHHCCCCCE LMMGKTPDSIEAIRPLRDGVIADIDVAEQMIKHFITKVHGGKPNAFRSPEIVICVPSGST EEECCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC SVERRAIRDAASNAGASEVWLIEEPMAAAIGADMPVTEPIGSMVVDIGGGTTEVAVLSLR HHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEEC GLAYTTSVRAGGDKMDEAIVSYVRRHHNLLIGESTAERIKKDFGIARIPADGVGLTIHIK CCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCEEECCCCCCEEEEEEC GRDLVNGVPKEISINQAQIAEALSEPIGTIVEGVRIALENTAPELAADIVDQGIVLTGGG CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCEEEECCC ALIAELDELLRDATGLPVTVADDPLTCVAIGTGRAMEDPAFRGVLQQA HHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHCC >Mature Secondary Structure SFFSRWFKFNSQDMAIDLGTANTVVYVRGKGIVLNEPSVVAVETLNGIKRVKAVGDDAK CHHHHHHHCCCCCEEEEECCCCEEEEEECCEEEECCCCEEEEHHHHHHHHHHHCCCCCE LMMGKTPDSIEAIRPLRDGVIADIDVAEQMIKHFITKVHGGKPNAFRSPEIVICVPSGST EEECCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC SVERRAIRDAASNAGASEVWLIEEPMAAAIGADMPVTEPIGSMVVDIGGGTTEVAVLSLR HHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEEC GLAYTTSVRAGGDKMDEAIVSYVRRHHNLLIGESTAERIKKDFGIARIPADGVGLTIHIK CCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCEEECCCCCCEEEEEEC GRDLVNGVPKEISINQAQIAEALSEPIGTIVEGVRIALENTAPELAADIVDQGIVLTGGG CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCEEEECCC ALIAELDELLRDATGLPVTVADDPLTCVAIGTGRAMEDPAFRGVLQQA HHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]