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The map label for this gene is phoD [H]

Identifier: 103487110

GI number: 103487110

Start: 1703813

End: 1705378

Strand: Direct

Name: phoD [H]

Synonym: Sala_1625

Alternate gene names: 103487110

Gene position: 1703813-1705378 (Clockwise)

Preceding gene: 103487109

Following gene: 103487112

Centisome position: 50.93

GC content: 65.07

Gene sequence:

>1566_bases
ATGTACAACCGCCGCCATTTCCTTGCCGGAGCGACGCTCGCCGGGCTTGCCGCGCCGGCGATCGTCCGCGCGCAGGGTAT
CTTGCGCGACTTTCCCTTTCAGCTTGGCGTCGCGGCGGGCGACCCGGCGAGCGATGGTTTCGTCATCTGGACGCGCCTCG
CGCCCGAGCCGATGGAGCGCCACGGCGGGATGCCGCTGACCAATGTGCCGGTCGAATGGGAGGTCGCCAGCGACGGCGGC
TTTCGCGACGTGGTGGCAAAGGGCACCGCGCTGGCGCGCCCCGAGCTGGCGCACAGCGTCCATGTCGAGGTCGCGGGATT
GCAGCCCGATCGCCCCTATTATTACCGTTTCACCGCCGCGGGCGAACGCAGCCTGCGCGGGCGCGCGCGGACGCTTCCCG
CGCCCGGCGCGCGTGTCGATGCGCTGACGTTCGGCGTCGCGGGATGCCAGCATTTCGAGTCGGGCTTTTACGGCGCCTAT
CGCCACATGGCGCGCGAGGATCTGGCCTTCGTCTATCATTATGGCGATTTCATCTATGAATATCGGCAGGATTATCTGTT
CGACGACGGGCTGCCGATCCGCCCGGTGCGCCAATATGCGCAACGCGCGCTGTTCGACCTGACCGATTTCAGAACTGCCT
ATGCGCAGACCCTGCTCGACATCGACCAGCAGGCGGTGCGGTCGGTCCACGCGCATCTGTCGAGCTTCGACGATCACGAG
ATCCGCAACAATTGGGTGTCCGACCACGACAATTGGAAATTGGGGCTCGACAAGGAAGACCCCGATGCTGCGTCGCCCGA
GATTTTCATGCTCAAGAAACAGGCGGCGATGCAGGCGTGGTACGAACATATGCCCGTGCGCCGGTCGCTGTTGCCACGCG
GCGGCATGGTCGCGGCGCACCGCGAGCTGCGTTATGGCGACCTGATGGCGATGCAATTGCTCGACACGCGGCAATATCGC
GACGACCAGCCATGCGGCGACGGCTTCAAACCCGCCTGCCCCGACGTGTTCGCCAGGGACCGGCAGGTGCTCGGCAAGGT
GCAGGAGGAATGGCTGGCGCGCAATCTGGCGCGCGGCGGCGCGACGTGGAACGCGCTGGCGCAGCAGGTGACGATGATGT
CGCTCGACCGGCGGCGGCGGCCCGAAGAGAGTGAAAAGATCGTCAACCTCGACAGCTGGGCAGGTTATGAGGTGGCGCGG
ACGCGGATGTTGTCGCGCTTTGCGGGGCTGAACAACAATATCGTGCTGACCGGCGACGAGCATCAGAATTTCTGCGGCGA
TCTGGTGCTGAAGGACAAGGTCGTCGGCGCCGAGTTTGTCGCGACATCGATCTCCAGCGGCGGGGACGGCAGCGACAAGC
GCGTCGGCACCGACGAATGGCTGGCGCGCAATCCCGAACTCAAATTCGCCAACGACCAGCGCGGTTATCTGGTCTGTGAG
GTCAATCGCGAGGCGTGGCAGACGCACTTCATGGTCGTCGACAAGGTCTCGACGCCGGTGAACAGCCTGTCGAAACGCGC
GACGGGCGTGGTCGAACGCGGCGTTGCGGGCGTGAAGATGGCGTAA

Upstream 100 bases:

>100_bases
TGGCGCGCATGTGGGTGTGAGGACGTCGCCGAACTGTCATTGATGAAACGCAGAGCTGGGCTATCGAGGGGCATCGATTC
GCCCCGACGGAGCCCAGCCC

Downstream 100 bases:

>100_bases
GCCGCCCGGCGGGCCTCATTTTCGGCCGAACAACCGTTCGACATCGCCCATCGCCAGCTTTACCCAAGTCGGGCGGCCAT
GGTTGCACTGGCCCGAATGC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MYNRRHFLAGATLAGLAAPAIVRAQGILRDFPFQLGVAAGDPASDGFVIWTRLAPEPMERHGGMPLTNVPVEWEVASDGG
FRDVVAKGTALARPELAHSVHVEVAGLQPDRPYYYRFTAAGERSLRGRARTLPAPGARVDALTFGVAGCQHFESGFYGAY
RHMAREDLAFVYHYGDFIYEYRQDYLFDDGLPIRPVRQYAQRALFDLTDFRTAYAQTLLDIDQQAVRSVHAHLSSFDDHE
IRNNWVSDHDNWKLGLDKEDPDAASPEIFMLKKQAAMQAWYEHMPVRRSLLPRGGMVAAHRELRYGDLMAMQLLDTRQYR
DDQPCGDGFKPACPDVFARDRQVLGKVQEEWLARNLARGGATWNALAQQVTMMSLDRRRRPEESEKIVNLDSWAGYEVAR
TRMLSRFAGLNNNIVLTGDEHQNFCGDLVLKDKVVGAEFVATSISSGGDGSDKRVGTDEWLARNPELKFANDQRGYLVCE
VNREAWQTHFMVVDKVSTPVNSLSKRATGVVERGVAGVKMA

Sequences:

>Translated_521_residues
MYNRRHFLAGATLAGLAAPAIVRAQGILRDFPFQLGVAAGDPASDGFVIWTRLAPEPMERHGGMPLTNVPVEWEVASDGG
FRDVVAKGTALARPELAHSVHVEVAGLQPDRPYYYRFTAAGERSLRGRARTLPAPGARVDALTFGVAGCQHFESGFYGAY
RHMAREDLAFVYHYGDFIYEYRQDYLFDDGLPIRPVRQYAQRALFDLTDFRTAYAQTLLDIDQQAVRSVHAHLSSFDDHE
IRNNWVSDHDNWKLGLDKEDPDAASPEIFMLKKQAAMQAWYEHMPVRRSLLPRGGMVAAHRELRYGDLMAMQLLDTRQYR
DDQPCGDGFKPACPDVFARDRQVLGKVQEEWLARNLARGGATWNALAQQVTMMSLDRRRRPEESEKIVNLDSWAGYEVAR
TRMLSRFAGLNNNIVLTGDEHQNFCGDLVLKDKVVGAEFVATSISSGGDGSDKRVGTDEWLARNPELKFANDQRGYLVCE
VNREAWQTHFMVVDKVSTPVNSLSKRATGVVERGVAGVKMA
>Mature_521_residues
MYNRRHFLAGATLAGLAAPAIVRAQGILRDFPFQLGVAAGDPASDGFVIWTRLAPEPMERHGGMPLTNVPVEWEVASDGG
FRDVVAKGTALARPELAHSVHVEVAGLQPDRPYYYRFTAAGERSLRGRARTLPAPGARVDALTFGVAGCQHFESGFYGAY
RHMAREDLAFVYHYGDFIYEYRQDYLFDDGLPIRPVRQYAQRALFDLTDFRTAYAQTLLDIDQQAVRSVHAHLSSFDDHE
IRNNWVSDHDNWKLGLDKEDPDAASPEIFMLKKQAAMQAWYEHMPVRRSLLPRGGMVAAHRELRYGDLMAMQLLDTRQYR
DDQPCGDGFKPACPDVFARDRQVLGKVQEEWLARNLARGGATWNALAQQVTMMSLDRRRRPEESEKIVNLDSWAGYEVAR
TRMLSRFAGLNNNIVLTGDEHQNFCGDLVLKDKVVGAEFVATSISSGGDGSDKRVGTDEWLARNPELKFANDQRGYLVCE
VNREAWQTHFMVVDKVSTPVNSLSKRATGVVERGVAGVKMA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58443; Mature: 58443

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNRRHFLAGATLAGLAAPAIVRAQGILRDFPFQLGVAAGDPASDGFVIWTRLAPEPMER
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCEEEEEECCCCHHHH
HGGMPLTNVPVEWEVASDGGFRDVVAKGTALARPELAHSVHVEVAGLQPDRPYYYRFTAA
CCCCCCCCCCEEEEECCCCCHHHHHHCCCHHCCCHHHCEEEEEEECCCCCCCEEEEEECC
GERSLRGRARTLPAPGARVDALTFGVAGCQHFESGFYGAYRHMAREDLAFVYHYGDFIYE
CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHH
YRQDYLFDDGLPIRPVRQYAQRALFDLTDFRTAYAQTLLDIDQQAVRSVHAHLSSFDDHE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IRNNWVSDHDNWKLGLDKEDPDAASPEIFMLKKQAAMQAWYEHMPVRRSLLPRGGMVAAH
HHHCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHCCCCCEEHHH
RELRYGDLMAMQLLDTRQYRDDQPCGDGFKPACPDVFARDRQVLGKVQEEWLARNLARGG
HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ATWNALAQQVTMMSLDRRRRPEESEKIVNLDSWAGYEVARTRMLSRFAGLNNNIVLTGDE
CHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCC
HQNFCGDLVLKDKVVGAEFVATSISSGGDGSDKRVGTDEWLARNPELKFANDQRGYLVCE
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEECCCCCCEEEEE
VNREAWQTHFMVVDKVSTPVNSLSKRATGVVERGVAGVKMA
ECHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYNRRHFLAGATLAGLAAPAIVRAQGILRDFPFQLGVAAGDPASDGFVIWTRLAPEPMER
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCEEEEEECCCCHHHH
HGGMPLTNVPVEWEVASDGGFRDVVAKGTALARPELAHSVHVEVAGLQPDRPYYYRFTAA
CCCCCCCCCCEEEEECCCCCHHHHHHCCCHHCCCHHHCEEEEEEECCCCCCCEEEEEECC
GERSLRGRARTLPAPGARVDALTFGVAGCQHFESGFYGAYRHMAREDLAFVYHYGDFIYE
CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHH
YRQDYLFDDGLPIRPVRQYAQRALFDLTDFRTAYAQTLLDIDQQAVRSVHAHLSSFDDHE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IRNNWVSDHDNWKLGLDKEDPDAASPEIFMLKKQAAMQAWYEHMPVRRSLLPRGGMVAAH
HHHCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHCCCCCEEHHH
RELRYGDLMAMQLLDTRQYRDDQPCGDGFKPACPDVFARDRQVLGKVQEEWLARNLARGG
HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
ATWNALAQQVTMMSLDRRRRPEESEKIVNLDSWAGYEVARTRMLSRFAGLNNNIVLTGDE
CHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCC
HQNFCGDLVLKDKVVGAEFVATSISSGGDGSDKRVGTDEWLARNPELKFANDQRGYLVCE
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEECCCCCCEEEEE
VNREAWQTHFMVVDKVSTPVNSLSKRATGVVERGVAGVKMA
ECHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]