Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is mreC [H]

Identifier: 103487113

GI number: 103487113

Start: 1708466

End: 1709368

Strand: Direct

Name: mreC [H]

Synonym: Sala_1628

Alternate gene names: 103487113

Gene position: 1708466-1709368 (Clockwise)

Preceding gene: 103487112

Following gene: 103487114

Centisome position: 51.07

GC content: 69.88

Gene sequence:

>903_bases
GTGGTCCGCCCGGCACATCGACGTCCGGGGCAATCCCGAAAGGCCCAGTACAGCCTGTTCGTCGCCTATGTCATCGCGGT
GACCGGCGCGGTGGCCGGGCTGTTGCTCGCGATATTGTCGGTCGCCGATCCCGTCGGCTTTGCCCAGCTGCGCATCGCAA
GCCAGGAACTCGCCGCACCGATCGCGCGCGGGACGCGCTCGGTCATCGGTTCGATTTCGGGCATCGACGACAGCGTCGGC
GCCTATGTCGCCGCAGGATCGCAGAACCGGCGGCTGCGCAAGGAGCTGGCCGACACGCGGCGCCAGCTGGTCGCGACCAG
TTCGCTCCAGGAAGAGAATCGGCAGCTCAAGGCACTGCTCAAGCTCCAGGAAACCGACAAGACCGCGCTCGCCAACGGCT
ATCTGCTCACCTCGACCTCGACGAGCAGCAGGCGCATCGCATTGCTCAGCATCGGGCGCAATCTGGGCGTCGCCGCGGGC
CAGCCGGTGCGCGGCGCCGACGGGCTGATCGGCCGCGTGCTGACCGCCGGGCCGTCGGTGTCGCAGGTGCTGTTGCTCAC
CGACGTCGACAATATCGTCCCCGTGCGCCGCGCGCGCGACGGGCTGCCCGCGCTCGCCAGCGGTCGCGGCAACGGCTATC
TTGACGTTCGCACGCTCAATATCGCGAACAATCCGTTCAAGCCCGGCGACATCCTGGTCACATCGGGCACCGGCGGCCTC
TATCCGCCGAACATCCCCGTCGCGATCGTCGTGCGGCGCCAGGACGACGGCGCGCTCGCGCGTCCGCTCGCCGACCCCGG
CAAGGTCGACGCCGTCGCGGTGCTGCGCCCCTATACCCCCGACAATATCGAGGCGGCGGGTCGCCCCGGTCCGGCCGCGC
TCCCTGTCGCCGCCGCGCCATGA

Upstream 100 bases:

>100_bases
ACGATCCGCTGACCTGCGTTGCGATCGGCACCGGTCGCGCGATGGAAGACCCCGCCTTCCGCGGCGTGCTCCAACAAGCC
TGATCGGGTAGCATCGCGTC

Downstream 100 bases:

>100_bases
ACCGCAAGGGTCCGCGCCTTGGCGAACCCGCCTCGCTGTGGCGGATGCGGATCGTGCCCGTGGCGAGCGTGATGCTCGCC
TCGGCGCTGCCGCTGATGCT

Product: rod shape-determining protein MreC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MVRPAHRRPGQSRKAQYSLFVAYVIAVTGAVAGLLLAILSVADPVGFAQLRIASQELAAPIARGTRSVIGSISGIDDSVG
AYVAAGSQNRRLRKELADTRRQLVATSSLQEENRQLKALLKLQETDKTALANGYLLTSTSTSSRRIALLSIGRNLGVAAG
QPVRGADGLIGRVLTAGPSVSQVLLLTDVDNIVPVRRARDGLPALASGRGNGYLDVRTLNIANNPFKPGDILVTSGTGGL
YPPNIPVAIVVRRQDDGALARPLADPGKVDAVAVLRPYTPDNIEAAGRPGPAALPVAAAP

Sequences:

>Translated_300_residues
MVRPAHRRPGQSRKAQYSLFVAYVIAVTGAVAGLLLAILSVADPVGFAQLRIASQELAAPIARGTRSVIGSISGIDDSVG
AYVAAGSQNRRLRKELADTRRQLVATSSLQEENRQLKALLKLQETDKTALANGYLLTSTSTSSRRIALLSIGRNLGVAAG
QPVRGADGLIGRVLTAGPSVSQVLLLTDVDNIVPVRRARDGLPALASGRGNGYLDVRTLNIANNPFKPGDILVTSGTGGL
YPPNIPVAIVVRRQDDGALARPLADPGKVDAVAVLRPYTPDNIEAAGRPGPAALPVAAAP
>Mature_300_residues
MVRPAHRRPGQSRKAQYSLFVAYVIAVTGAVAGLLLAILSVADPVGFAQLRIASQELAAPIARGTRSVIGSISGIDDSVG
AYVAAGSQNRRLRKELADTRRQLVATSSLQEENRQLKALLKLQETDKTALANGYLLTSTSTSSRRIALLSIGRNLGVAAG
QPVRGADGLIGRVLTAGPSVSQVLLLTDVDNIVPVRRARDGLPALASGRGNGYLDVRTLNIANNPFKPGDILVTSGTGGL
YPPNIPVAIVVRRQDDGALARPLADPGKVDAVAVLRPYTPDNIEAAGRPGPAALPVAAAP

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG1792

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Inner Membrane-Anchored [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreC family [H]

Homologues:

Organism=Escherichia coli, GI1789648, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007221
- InterPro:   IPR005223 [H]

Pfam domain/function: PF04085 MreC [H]

EC number: NA

Molecular weight: Translated: 31218; Mature: 31218

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPAHRRPGQSRKAQYSLFVAYVIAVTGAVAGLLLAILSVADPVGFAQLRIASQELAAP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECHHHHHHH
IARGTRSVIGSISGIDDSVGAYVAAGSQNRRLRKELADTRRQLVATSSLQEENRQLKALL
HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQETDKTALANGYLLTSTSTSSRRIALLSIGRNLGVAAGQPVRGADGLIGRVLTAGPSV
HHHHCCCHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCH
SQVLLLTDVDNIVPVRRARDGLPALASGRGNGYLDVRTLNIANNPFKPGDILVTSGTGGL
HEEEEEECCCHHHHHHHHCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCC
YPPNIPVAIVVRRQDDGALARPLADPGKVDAVAVLRPYTPDNIEAAGRPGPAALPVAAAP
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRPAHRRPGQSRKAQYSLFVAYVIAVTGAVAGLLLAILSVADPVGFAQLRIASQELAAP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECHHHHHHH
IARGTRSVIGSISGIDDSVGAYVAAGSQNRRLRKELADTRRQLVATSSLQEENRQLKALL
HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQETDKTALANGYLLTSTSTSSRRIALLSIGRNLGVAAGQPVRGADGLIGRVLTAGPSV
HHHHCCCHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCH
SQVLLLTDVDNIVPVRRARDGLPALASGRGNGYLDVRTLNIANNPFKPGDILVTSGTGGL
HEEEEEECCCHHHHHHHHCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCCEEEECCCCCC
YPPNIPVAIVVRRQDDGALARPLADPGKVDAVAVLRPYTPDNIEAAGRPGPAALPVAAAP
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]