Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486012
Identifier: 103486012
GI number: 103486012
Start: 536131
End: 536487
Strand: Reverse
Name: 103486012
Synonym: Sala_0519
Alternate gene names: NA
Gene position: 536487-536131 (Counterclockwise)
Preceding gene: 103486013
Following gene: 103486011
Centisome position: 16.04
GC content: 67.51
Gene sequence:
>357_bases ATGAAGCCGTTCAGTGAAACCGCGCGCGAAACACGTGCGAAAGCGAGTGAACTTGCAGAAAAAACCGCCGAAAATGCCCG CCTGACCGCCGAGGCGGCAAAGGCGCGCATCCAGGAAGGCTATGGCCGCGCCCGCGCCGCGACCGAAGACCTCGCCGCGC GCGCCAGCGAACAGGCCGGCGTCGCGCGCGAGGCGGCAAGCGAAGCCTATGCGAAGGGCAAGGTGCAGGCGAAGCGCGCG AACAGCAAGCTGAAGGACGTCGCCGAAAAGCAGCCGCTGGCGCTCGTCGCCGGCGCGGTCGCCATCGGCGCGCTGCTTGG ATCGCTGTTGCCGAAGGGTCGTTCCGGGGAGGAATGA
Upstream 100 bases:
>100_bases CGGCTGGCGCGCAAGGTGCAGGACGTGGTCGCGGGCATCGCCGATCGTTTTCGTGCCGACGCGACCGACGAAGATGGCGC CGGACAAGTGGAGGAAAATG
Downstream 100 bases:
>100_bases GCCCGCTTGCCCCGAACGAAAACCGCTGTTAGGGGCCGCCGCTTCTCCCCATCAGCGGTTATCCGCAAGGAAAGCAGCCA TGAGCAAATTGCACCTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKPFSETARETRAKASELAEKTAENARLTAEAAKARIQEGYGRARAATEDLAARASEQAGVAREAASEAYAKGKVQAKRA NSKLKDVAEKQPLALVAGAVAIGALLGSLLPKGRSGEE
Sequences:
>Translated_118_residues MKPFSETARETRAKASELAEKTAENARLTAEAAKARIQEGYGRARAATEDLAARASEQAGVAREAASEAYAKGKVQAKRA NSKLKDVAEKQPLALVAGAVAIGALLGSLLPKGRSGEE >Mature_118_residues MKPFSETARETRAKASELAEKTAENARLTAEAAKARIQEGYGRARAATEDLAARASEQAGVAREAASEAYAKGKVQAKRA NSKLKDVAEKQPLALVAGAVAIGALLGSLLPKGRSGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12279; Mature: 12279
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFSETARETRAKASELAEKTAENARLTAEAAKARIQEGYGRARAATEDLAARASEQAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAREAASEAYAKGKVQAKRANSKLKDVAEKQPLALVAGAVAIGALLGSLLPKGRSGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKPFSETARETRAKASELAEKTAENARLTAEAAKARIQEGYGRARAATEDLAARASEQAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAREAASEAYAKGKVQAKRANSKLKDVAEKQPLALVAGAVAIGALLGSLLPKGRSGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA