Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486011
Identifier: 103486011
GI number: 103486011
Start: 535836
End: 536051
Strand: Reverse
Name: 103486011
Synonym: Sala_0518
Alternate gene names: NA
Gene position: 536051-535836 (Counterclockwise)
Preceding gene: 103486012
Following gene: 103486006
Centisome position: 16.02
GC content: 59.72
Gene sequence:
>216_bases ATGAGCAAATTGCACCTCGTGTTCGGCGGCCGGGTCAGCGATCCGCAGGGCCTCGACTTTGTCGACCTTGCCAATCTGGA TGTCGTCGGCCTCTATCCCGACTATAAATCGGCCGAAAAAGCATGGCGCAGCGCCGCGCAGCGCACCGTCGACGATGCCG AAATGAAATATGTCGTCGTCCACCTGCACAAGCTGTTGCAGCCCGAGGCGGAGTGA
Upstream 100 bases:
>100_bases GGTCGTTCCGGGGAGGAATGAGCCCGCTTGCCCCGAACGAAAACCGCTGTTAGGGGCCGCCGCTTCTCCCCATCAGCGGT TATCCGCAAGGAAAGCAGCC
Downstream 100 bases:
>100_bases TCGCTGACAAGGGTTGGACTATGATTCACTGCTTGTGACCGTCATTCCGGCGAAGGCCGGAATCTCGCCCTCGCATCCTG CCGCAACGGCGAGATCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Inositol Monophosphatase
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSKLHLVFGGRVSDPQGLDFVDLANLDVVGLYPDYKSAEKAWRSAAQRTVDDAEMKYVVVHLHKLLQPEAE
Sequences:
>Translated_71_residues MSKLHLVFGGRVSDPQGLDFVDLANLDVVGLYPDYKSAEKAWRSAAQRTVDDAEMKYVVVHLHKLLQPEAE >Mature_70_residues SKLHLVFGGRVSDPQGLDFVDLANLDVVGLYPDYKSAEKAWRSAAQRTVDDAEMKYVVVHLHKLLQPEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7969; Mature: 7838
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLHLVFGGRVSDPQGLDFVDLANLDVVGLYPDYKSAEKAWRSAAQRTVDDAEMKYVVV CCCEEEEECCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHH HLHKLLQPEAE HHHHHHCCCCC >Mature Secondary Structure SKLHLVFGGRVSDPQGLDFVDLANLDVVGLYPDYKSAEKAWRSAAQRTVDDAEMKYVVV CCEEEEECCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHH HLHKLLQPEAE HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA