Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486013
Identifier: 103486013
GI number: 103486013
Start: 536471
End: 536854
Strand: Reverse
Name: 103486013
Synonym: Sala_0520
Alternate gene names: NA
Gene position: 536854-536471 (Counterclockwise)
Preceding gene: 103486014
Following gene: 103486012
Centisome position: 16.05
GC content: 67.19
Gene sequence:
>384_bases ATGCCGCGCACACGCAACCGCCTGATAACCGCCGCGCGCCGGTCGATGCTCCAGCGCGCTGAACTCTATCGGCGGCTCGA CGTCGCCAAGGCGGCGCTGCATCCCGCCGCGCTGCTCGACCGCGGCAAATATCGCGTGCGGACCAAGGTCGACGATGCCG CGCACGCGGTAAGGCAGGAGTTTCGCGACAATCGCTGGCCGATTGCGATCGCCGCCGCTGCGGGCATCGCCTGGCTGCTG CGCGAACCGATCAAGGAACATGCGCCCCGGCTGGCGCGCAAGGTGCAGGACGTGGTCGCGGGCATCGCCGATCGTTTTCG TGCCGACGCGACCGACGAAGATGGCGCCGGACAAGTGGAGGAAAATGATGAAGCCGTTCAGTGA
Upstream 100 bases:
>100_bases TGTTGATCGCGGCGCTCGCCGGCTGGCGCGCGCGCCGCGCCTATGACGACATCCGCACCGCGCTGCGGCGCGACCTGGTG AACGAAGGGGTCGATGACTG
Downstream 100 bases:
>100_bases AACCGCGCGCGAAACACGTGCGAAAGCGAGTGAACTTGCAGAAAAAACCGCCGAAAATGCCCGCCTGACCGCCGAGGCGG CAAAGGCGCGCATCCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MPRTRNRLITAARRSMLQRAELYRRLDVAKAALHPAALLDRGKYRVRTKVDDAAHAVRQEFRDNRWPIAIAAAAGIAWLL REPIKEHAPRLARKVQDVVAGIADRFRADATDEDGAGQVEENDEAVQ
Sequences:
>Translated_127_residues MPRTRNRLITAARRSMLQRAELYRRLDVAKAALHPAALLDRGKYRVRTKVDDAAHAVRQEFRDNRWPIAIAAAAGIAWLL REPIKEHAPRLARKVQDVVAGIADRFRADATDEDGAGQVEENDEAVQ >Mature_126_residues PRTRNRLITAARRSMLQRAELYRRLDVAKAALHPAALLDRGKYRVRTKVDDAAHAVRQEFRDNRWPIAIAAAAGIAWLLR EPIKEHAPRLARKVQDVVAGIADRFRADATDEDGAGQVEENDEAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14317; Mature: 14186
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTRNRLITAARRSMLQRAELYRRLDVAKAALHPAALLDRGKYRVRTKVDDAAHAVRQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FRDNRWPIAIAAAAGIAWLLREPIKEHAPRLARKVQDVVAGIADRFRADATDEDGAGQVE HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ENDEAVQ CCCCCCC >Mature Secondary Structure PRTRNRLITAARRSMLQRAELYRRLDVAKAALHPAALLDRGKYRVRTKVDDAAHAVRQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FRDNRWPIAIAAAAGIAWLLREPIKEHAPRLARKVQDVVAGIADRFRADATDEDGAGQVE HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ENDEAVQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA