The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485927

Identifier: 103485927

GI number: 103485927

Start: 443253

End: 443660

Strand: Direct

Name: 103485927

Synonym: Sala_0434

Alternate gene names: NA

Gene position: 443253-443660 (Clockwise)

Preceding gene: 103485924

Following gene: 103485931

Centisome position: 13.25

GC content: 58.09

Gene sequence:

>408_bases
ATGTTCTGGAAACCGCAGGTGGCTTTGCTGGTTTCTGAGCGCACGCTGCTTCCCGTGCTTATGCCGCTGGCCCCGGCGGC
CACGCTTGCTCGAAGATTCCCCACACAATTGGCCCTGGTTCTGAAGGACCACGGCGTCCCGAGCGAATTCATCGCTGAGG
AAGTCTGGCAGATGGACAAGGTCCAATATGCAAAGACCGCGAACCGGAGCGTCGTGGGCATCCTCAATGAGTTCGTTAAG
CAGGCCGAATTCTGGCTGGCTGCCTATGCCTATGAGAAGGGTGATGATGACGACCTCTTGGCGATTTCCGCCAAGTTAGC
GGAGACACCATGTAGCCCGCTGTACAAGGGGCCGGTCTCGCCGGACAAAGCCCTTCATGAACTCGTGAAGGCTGGTTCGC
AGGCATGA

Upstream 100 bases:

>100_bases
CGCTAACGGGGTCCCTTTTGCACGCCGGTCCACAATTAAACCGGAAATCGTTGCCCCGAGGCAAAGCGACACTGCACTCG
GCAATTGGTATGCCACGGTC

Downstream 100 bases:

>100_bases
GCCTGCTGGCCGTCCACTGCGCTCGGAGATCCTACAGCACTTGTCTGGAAACCCAGCTCGTTCGGTCAGGCGGGATCGGG
CGGCAAATCGACAATCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MFWKPQVALLVSERTLLPVLMPLAPAATLARRFPTQLALVLKDHGVPSEFIAEEVWQMDKVQYAKTANRSVVGILNEFVK
QAEFWLAAYAYEKGDDDDLLAISAKLAETPCSPLYKGPVSPDKALHELVKAGSQA

Sequences:

>Translated_135_residues
MFWKPQVALLVSERTLLPVLMPLAPAATLARRFPTQLALVLKDHGVPSEFIAEEVWQMDKVQYAKTANRSVVGILNEFVK
QAEFWLAAYAYEKGDDDDLLAISAKLAETPCSPLYKGPVSPDKALHELVKAGSQA
>Mature_135_residues
MFWKPQVALLVSERTLLPVLMPLAPAATLARRFPTQLALVLKDHGVPSEFIAEEVWQMDKVQYAKTANRSVVGILNEFVK
QAEFWLAAYAYEKGDDDDLLAISAKLAETPCSPLYKGPVSPDKALHELVKAGSQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14895; Mature: 14895

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWKPQVALLVSERTLLPVLMPLAPAATLARRFPTQLALVLKDHGVPSEFIAEEVWQMDK
CCCCCHHHEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VQYAKTANRSVVGILNEFVKQAEFWLAAYAYEKGDDDDLLAISAKLAETPCSPLYKGPVS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCC
PDKALHELVKAGSQA
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MFWKPQVALLVSERTLLPVLMPLAPAATLARRFPTQLALVLKDHGVPSEFIAEEVWQMDK
CCCCCHHHEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VQYAKTANRSVVGILNEFVKQAEFWLAAYAYEKGDDDDLLAISAKLAETPCSPLYKGPVS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCCCCCCCCC
PDKALHELVKAGSQA
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA