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The map label for this gene is ydhD [C]

Identifier: 103485852

GI number: 103485852

Start: 370140

End: 370472

Strand: Direct

Name: ydhD [C]

Synonym: Sala_0357

Alternate gene names: 103485852

Gene position: 370140-370472 (Clockwise)

Preceding gene: 103485851

Following gene: 103485854

Centisome position: 11.06

GC content: 60.66

Gene sequence:

>333_bases
ATGAGCGATCCCGCTACCCAAGCCCGTATTTCCAAGCTGGTCGCCGACCATCCCGTGCTGCTGTTCATGAAGGGCACGCC
GCTGTTTCCGCAGTGCGGCTTTTCGTCGCGCGCGATCGCCATGCTCGACCGGCTCGGCGTCGAATATGAAACGGTCGACG
TGCTGCAGGACATGGAAATCCGCCAGGGCATCAAGGAATACTCCGACTGGCCGACGATTCCCCAGCTCTATGTGAAGGGC
GAATTCGTCGGCGGGTCCGACATCATGATGGAAATGTGGGAAGCGGGCGAGCTTCACCAGTTGATGGACGGCATCCCGAC
GCGCGCGCAATAG

Upstream 100 bases:

>100_bases
TGGGCGGCGAACTTCATGCCTTGCAATTGACCACCGCCGTTCCTTCATAGAGGGAAGAGACACATAATTTTCTGGCGCGC
CGCGCCCCCGGAGACTGACC

Downstream 100 bases:

>100_bases
GCTCGCGTCCGTGTTCAGCACCACGGGCCGCTGACGGCGCACCCGCCCTTTTCGGTTCAGGCGGCGCTCAGCGGCAGCGC
AGTTCGCCGCGGTCGATCGC

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSDPATQARISKLVADHPVLLFMKGTPLFPQCGFSSRAIAMLDRLGVEYETVDVLQDMEIRQGIKEYSDWPTIPQLYVKG
EFVGGSDIMMEMWEAGELHQLMDGIPTRAQ

Sequences:

>Translated_110_residues
MSDPATQARISKLVADHPVLLFMKGTPLFPQCGFSSRAIAMLDRLGVEYETVDVLQDMEIRQGIKEYSDWPTIPQLYVKG
EFVGGSDIMMEMWEAGELHQLMDGIPTRAQ
>Mature_109_residues
SDPATQARISKLVADHPVLLFMKGTPLFPQCGFSSRAIAMLDRLGVEYETVDVLQDMEIRQGIKEYSDWPTIPQLYVKGE
FVGGSDIMMEMWEAGELHQLMDGIPTRAQ

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI95113651, Length=101, Percent_Identity=51.4851485148515, Blast_Score=110, Evalue=2e-25,
Organism=Homo sapiens, GI42516576, Length=91, Percent_Identity=51.6483516483517, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1787943, Length=97, Percent_Identity=47.4226804123711, Blast_Score=109, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17556042, Length=105, Percent_Identity=45.7142857142857, Blast_Score=102, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988153, Length=85, Percent_Identity=47.0588235294118, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71988159, Length=87, Percent_Identity=44.8275862068966, Blast_Score=92, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6325198, Length=97, Percent_Identity=50.5154639175258, Blast_Score=108, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=88, Percent_Identity=48.8636363636364, Blast_Score=99, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6321022, Length=88, Percent_Identity=48.8636363636364, Blast_Score=99, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24642023, Length=92, Percent_Identity=48.9130434782609, Blast_Score=111, Evalue=8e-26,
Organism=Drosophila melanogaster, GI19921242, Length=98, Percent_Identity=45.9183673469388, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12376; Mature: 12245

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPATQARISKLVADHPVLLFMKGTPLFPQCGFSSRAIAMLDRLGVEYETVDVLQDMEI
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
RQGIKEYSDWPTIPQLYVKGEFVGGSDIMMEMWEAGELHQLMDGIPTRAQ
HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
SDPATQARISKLVADHPVLLFMKGTPLFPQCGFSSRAIAMLDRLGVEYETVDVLQDMEI
CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
RQGIKEYSDWPTIPQLYVKGEFVGGSDIMMEMWEAGELHQLMDGIPTRAQ
HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]