Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485851
Identifier: 103485851
GI number: 103485851
Start: 369856
End: 370089
Strand: Direct
Name: 103485851
Synonym: Sala_0356
Alternate gene names: NA
Gene position: 369856-370089 (Clockwise)
Preceding gene: 103485850
Following gene: 103485852
Centisome position: 11.06
GC content: 62.39
Gene sequence:
>234_bases ATGGGCATGCGCGAGGACGAATTGAAGGCGATGATCGAGGCGGCGTTTCCGGGCGCCGCGGTAACGATCACCGACCTTGC CGGCGACAATGACCATTATTCGGCGCATGTGGTCAGCGAATCCTTTCGCGGAATGAGCCGCGTCGCGCAGCACAAGGCGG TCTATGCCGCGCTCGGCGGGCGCATGGGCGGCGAACTTCATGCCTTGCAATTGACCACCGCCGTTCCTTCATAG
Upstream 100 bases:
>100_bases AATGTCGATATCAGCGATGCGGAGATTCGCGCCATGCTGAACGACAAGGCCGCCGAAGCGCGGCGCCAGTTCATCGATAG CGCGAATTGAGGCCGCCGCG
Downstream 100 bases:
>100_bases AGGGAAGAGACACATAATTTTCTGGCGCGCCGCGCCCCCGGAGACTGACCATGAGCGATCCCGCTACCCAAGCCCGTATT TCCAAGCTGGTCGCCGACCA
Product: BolA-like protein
Products: NA
Alternate protein names: BolA-Like Protein; BolA Protein; Conserved Domain Protein; BolA/YrbA Family Protein; Stress-Induced Morphogen; Phosphoribosylformylglycinamidine Synthase II; Stress-Induced Morphogen BolA-Like Protein; Morphology/Transcription Regulator BolA Family Protein; Bola Family Protein
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGMREDELKAMIEAAFPGAAVTITDLAGDNDHYSAHVVSESFRGMSRVAQHKAVYAALGGRMGGELHALQLTTAVPS
Sequences:
>Translated_77_residues MGMREDELKAMIEAAFPGAAVTITDLAGDNDHYSAHVVSESFRGMSRVAQHKAVYAALGGRMGGELHALQLTTAVPS >Mature_76_residues GMREDELKAMIEAAFPGAAVTITDLAGDNDHYSAHVVSESFRGMSRVAQHKAVYAALGGRMGGELHALQLTTAVPS
Specific function: Unknown
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8115; Mature: 7984
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMREDELKAMIEAAFPGAAVTITDLAGDNDHYSAHVVSESFRGMSRVAQHKAVYAALGG CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC RMGGELHALQLTTAVPS CCCCCEEEEEEEECCCC >Mature Secondary Structure GMREDELKAMIEAAFPGAAVTITDLAGDNDHYSAHVVSESFRGMSRVAQHKAVYAALGG CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC RMGGELHALQLTTAVPS CCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA