Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is blaI [H]
Identifier: 103485854
GI number: 103485854
Start: 371373
End: 371741
Strand: Direct
Name: blaI [H]
Synonym: Sala_0359
Alternate gene names: 103485854
Gene position: 371373-371741 (Clockwise)
Preceding gene: 103485852
Following gene: 103485855
Centisome position: 11.1
GC content: 67.21
Gene sequence:
>369_bases ATGGCAGAACGAGCAAGCGAATCGGAGATGCAGGTGCTGTCGGCGCTGTGGGATGAAGCCCCGCAGACCGCCGCCGACCT GACCCGGCGCGTCGGTGCGGCGAACGGCTGGACGCAGGCGACGGTCAAGACGCTGCTTGCACGGCTGGTGCAGAAGGGCG CGGTAACCGCCGAGGCCGATGGCCGCCGCTATCTTTACAGCCCCGCGATCGGGCGCGCCGAAGCCGTCGGTGAGGAATCG CAGCGTTTCGTCGACCGCCTGTTCGGCGGCCGCGTCAGCCCGCTGATCGCACACCTCGCCGATCGTGAGGCGCTGAGCGA TGCCGACATCGCCGAGATCGAGGCGCTTTTGAAGAAGCTCAAGTCATGA
Upstream 100 bases:
>100_bases CGGCGACGGGCGGGATCGCCCGTTCGTTCAGCCAGCGTTCAGCCCATTGACTACAACTGTAGTCGCGTCAGTATCGACGA AGCCAATGGGAGGGGTCCGC
Downstream 100 bases:
>100_bases GCGCCGCGATGTTTATCGAAGCGTGGAGCGACACGCTGCTCACGACTGCGCTGCTCGTCGTCGCGGTGTTGCTGATCCGC AAGCCCTTTGCCCGTCATTT
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: Beta-lactamase repressor protein; Regulatory protein BlaI [H]
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAERASESEMQVLSALWDEAPQTAADLTRRVGAANGWTQATVKTLLARLVQKGAVTAEADGRRYLYSPAIGRAEAVGEES QRFVDRLFGGRVSPLIAHLADREALSDADIAEIEALLKKLKS
Sequences:
>Translated_122_residues MAERASESEMQVLSALWDEAPQTAADLTRRVGAANGWTQATVKTLLARLVQKGAVTAEADGRRYLYSPAIGRAEAVGEES QRFVDRLFGGRVSPLIAHLADREALSDADIAEIEALLKKLKS >Mature_121_residues AERASESEMQVLSALWDEAPQTAADLTRRVGAANGWTQATVKTLLARLVQKGAVTAEADGRRYLYSPAIGRAEAVGEESQ RFVDRLFGGRVSPLIAHLADREALSDADIAEIEALLKKLKS
Specific function: Transcriptional repressor that constitutively blocks expression of beta-lactamase. Regulates genes involved in antibiotic resistance. Binds DNA as a dimer [H]
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BlaI transcriptional regulatory family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005650 - InterPro: IPR011991 [H]
Pfam domain/function: PF03965 Pencillinase_R [H]
EC number: NA
Molecular weight: Translated: 13195; Mature: 13064
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERASESEMQVLSALWDEAPQTAADLTRRVGAANGWTQATVKTLLARLVQKGAVTAEAD CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC GRRYLYSPAIGRAEAVGEESQRFVDRLFGGRVSPLIAHLADREALSDADIAEIEALLKKL CCEEECCCCCCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KS CC >Mature Secondary Structure AERASESEMQVLSALWDEAPQTAADLTRRVGAANGWTQATVKTLLARLVQKGAVTAEAD CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC GRRYLYSPAIGRAEAVGEESQRFVDRLFGGRVSPLIAHLADREALSDADIAEIEALLKKL CCEEECCCCCCHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3096969; 3305074; 3260234; 3040663; 3498148 [H]