The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485806

Identifier: 103485806

GI number: 103485806

Start: 315471

End: 316313

Strand: Direct

Name: 103485806

Synonym: Sala_0311

Alternate gene names: NA

Gene position: 315471-316313 (Clockwise)

Preceding gene: 103485802

Following gene: 103485807

Centisome position: 9.43

GC content: 67.85

Gene sequence:

>843_bases
ATGACCAGCCGCCTCGGGCCCATGCTGAAGGCCATCCGCGAACGCGCGGGCATCGCGCAGCTCGAGCTGTCGCTGCGCAT
GAATGTGTCGCAGCGCCACATCAGCTTTGTCGAAAGCGGCCGCTCGCGCCCGAGCCGCGACCTGATCGGGGCATGGCTCG
GCGAAACGGACGCGCCGCCTTCGCTGCGCAATGCGGTGCTGCTCGCGGCCGGATACGCCCCCGCATCGCACGATGTTTCG
CCGCGTGATCCACGGCTGGCGGTCGCGATCGCAGCGCTCGACCGCACGCTGGACCTGCACGAACCCTATCCCGGCCTGGT
TTTCGATGCCGACTGGCAGGCGCACCTCACCAACCGGAGCGCGCGGCGGCTGATGCGGCTGAACCTGCCCGATTTCGTTG
CTGCGCTCGATGATCTGTCGCTGGGTTTCAGCATGATCGACGCGCTGATCCATCCCGGCGGGATGTTCCGCTATATGCGT
GACCCGTGGATCGGCGGCGGCGCGCTGCTCGACCAGCTGCGCCGCGAACAATGGGTGCGCCCCGCGATCGAGCCGCGCGC
CGACCGGGTCGAGGCGTCGATGATCGAACGCTTCGGCCCGCGCCCACCGCAGCCGACGAAGCCTTCGGCCGATCCCTGTC
TGAACCTGGTCTTTGATACGCCGCAGGGGGTGATGCGCTTTTTCACGATCCAGAGCGTCTTTGCCTTGCCGCAGGATGTG
ACGCTGGCCTCGCTGCGCATGGAATTGTGGTTCCCCGCCGACGAGCCGACGCGCGCGGCAATGCGGGCACTCGCGAACAG
CGAGGCTGCCCCTGGCGAGCCGCTGGTCACCGTGAAGCCATAA

Upstream 100 bases:

>100_bases
GTTTGGGACGGGCAATTTATCCAGCACCATGCGAAACATTATTACGCCTACCTGCGAGGTAGTCGACCCGAACGCCTTTT
GCATCCCATAGGCCGCACCC

Downstream 100 bases:

>100_bases
AGCAGGACATCGCCCCCGATCAGGCGATGATGGTGCGGTCGAGAAGACTCGAACTTCCACGGCCTTTCGGCCACAACGAC
CTCAACGTTGCGCGTCTACC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTSRLGPMLKAIRERAGIAQLELSLRMNVSQRHISFVESGRSRPSRDLIGAWLGETDAPPSLRNAVLLAAGYAPASHDVS
PRDPRLAVAIAALDRTLDLHEPYPGLVFDADWQAHLTNRSARRLMRLNLPDFVAALDDLSLGFSMIDALIHPGGMFRYMR
DPWIGGGALLDQLRREQWVRPAIEPRADRVEASMIERFGPRPPQPTKPSADPCLNLVFDTPQGVMRFFTIQSVFALPQDV
TLASLRMELWFPADEPTRAAMRALANSEAAPGEPLVTVKP

Sequences:

>Translated_280_residues
MTSRLGPMLKAIRERAGIAQLELSLRMNVSQRHISFVESGRSRPSRDLIGAWLGETDAPPSLRNAVLLAAGYAPASHDVS
PRDPRLAVAIAALDRTLDLHEPYPGLVFDADWQAHLTNRSARRLMRLNLPDFVAALDDLSLGFSMIDALIHPGGMFRYMR
DPWIGGGALLDQLRREQWVRPAIEPRADRVEASMIERFGPRPPQPTKPSADPCLNLVFDTPQGVMRFFTIQSVFALPQDV
TLASLRMELWFPADEPTRAAMRALANSEAAPGEPLVTVKP
>Mature_279_residues
TSRLGPMLKAIRERAGIAQLELSLRMNVSQRHISFVESGRSRPSRDLIGAWLGETDAPPSLRNAVLLAAGYAPASHDVSP
RDPRLAVAIAALDRTLDLHEPYPGLVFDADWQAHLTNRSARRLMRLNLPDFVAALDDLSLGFSMIDALIHPGGMFRYMRD
PWIGGGALLDQLRREQWVRPAIEPRADRVEASMIERFGPRPPQPTKPSADPCLNLVFDTPQGVMRFFTIQSVFALPQDVT
LASLRMELWFPADEPTRAAMRALANSEAAPGEPLVTVKP

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31016; Mature: 30885

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRLGPMLKAIRERAGIAQLELSLRMNVSQRHISFVESGRSRPSRDLIGAWLGETDAPP
CCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCH
SLRNAVLLAAGYAPASHDVSPRDPRLAVAIAALDRTLDLHEPYPGLVFDADWQAHLTNRS
HHHCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCEECCCCHHHHHHHH
ARRLMRLNLPDFVAALDDLSLGFSMIDALIHPGGMFRYMRDPWIGGGALLDQLRREQWVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCC
PAIEPRADRVEASMIERFGPRPPQPTKPSADPCLNLVFDTPQGVMRFFTIQSVFALPQDV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHCCCCC
TLASLRMELWFPADEPTRAAMRALANSEAAPGEPLVTVKP
HHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECC
>Mature Secondary Structure 
TSRLGPMLKAIRERAGIAQLELSLRMNVSQRHISFVESGRSRPSRDLIGAWLGETDAPP
CCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCH
SLRNAVLLAAGYAPASHDVSPRDPRLAVAIAALDRTLDLHEPYPGLVFDADWQAHLTNRS
HHHCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCEECCCCHHHHHHHH
ARRLMRLNLPDFVAALDDLSLGFSMIDALIHPGGMFRYMRDPWIGGGALLDQLRREQWVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHCC
PAIEPRADRVEASMIERFGPRPPQPTKPSADPCLNLVFDTPQGVMRFFTIQSVFALPQDV
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHCCCCC
TLASLRMELWFPADEPTRAAMRALANSEAAPGEPLVTVKP
HHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA