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The map label for this gene is recR

Identifier: 103485745

GI number: 103485745

Start: 253889

End: 254485

Strand: Direct

Name: recR

Synonym: Sala_0250

Alternate gene names: 103485745

Gene position: 253889-254485 (Clockwise)

Preceding gene: 103485742

Following gene: 103485746

Centisome position: 7.59

GC content: 69.18

Gene sequence:

>597_bases
ATGGTCTCAACCGAAATCGAAGCCCTCGTCCAGCAACTCGCCCGGCTCCCCGGCCTCGGCCCGCGCTCGGCGCGGCGCGC
GGTGCTGCACCTGATGAAAAAGCGCGAAAGTGCGTTCGCACCGCTGCTCGCCGCGCTGCAAACCGTGTCCGAACGGCTCG
TCACCTGCACGACCTGCGGCAATATCGACACGCACGACCCCTGCGCGATCTGCGCCGACCCGCGCCGCGATGCGCGCAGC
CTGTGCGTCGTCGAGGAGGTGTCGGACCTGTGGGCGCTCGACAAGTCGCGGCTCTTCCCCGGCAAATATCATGTGCTCGG
CGGGCGGCTGTCGGCGCTGGAGGGCGTGCGGCCGCAGGATCTCAGCATCGACGCGCTGGTCACGCGCGTCGCGGCGGGCG
GCATCGACGAGGTCGTGCTCGCAATGAATGCGACGCTGGAGGGCCAGACGACCGCCCATTATCTCGCCGAGCGGCTGGAG
GGCTATCCGGTGCGGCTGACGCAGCTGGCGCATGGTTTGCCGGTGGGCGGCGAGCTCGATTATCTCGATGAGGGGACGCT
GGCGCAGGCGCTGCGGGCAAGAAGGCCAGTGGGCTGA

Upstream 100 bases:

>100_bases
CTCCAGCCTCCGCTAGGCGCTTTCCGCCAAGCTGCGGCATCCTCTCCCGCAAGGGGAGAGGATTGTTGTGCGTCCGCGCA
GGCCGCGATAGGTGCTGTGC

Downstream 100 bases:

>100_bases
GCCTGCATCGTGCCGATCATTGACCGCCCGGCCGCGCATACCTAAATGGCATCCATGGCCATCCTACCCATCATCGAGAC
GCCGGACCCCCGGCTGCGCG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCGNIDTHDPCAICADPRRDARS
LCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQDLSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLE
GYPVRLTQLAHGLPVGGELDYLDEGTLAQALRARRPVG

Sequences:

>Translated_198_residues
MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCGNIDTHDPCAICADPRRDARS
LCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQDLSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLE
GYPVRLTQLAHGLPVGGELDYLDEGTLAQALRARRPVG
>Mature_198_residues
MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCGNIDTHDPCAICADPRRDARS
LCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQDLSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLE
GYPVRLTQLAHGLPVGGELDYLDEGTLAQALRARRPVG

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=39.4736842105263, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_SPHAL (Q1GWJ9)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615306.1
- ProteinModelPortal:   Q1GWJ9
- SMR:   Q1GWJ9
- GeneID:   4083108
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0250
- NMPDR:   fig|317655.9.peg.229
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   SALA317655:SALA_0250-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21373; Mature: 21373

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCC
NIDTHDPCAICADPRRDARSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQD
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCC
LSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLEGYPVRLTQLAHGLPVGGELD
CHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC
YLDEGTLAQALRARRPVG
CCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MVSTEIEALVQQLARLPGLGPRSARRAVLHLMKKRESAFAPLLAALQTVSERLVTCTTCG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCC
NIDTHDPCAICADPRRDARSLCVVEEVSDLWALDKSRLFPGKYHVLGGRLSALEGVRPQD
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCC
LSIDALVTRVAAGGIDEVVLAMNATLEGQTTAHYLAERLEGYPVRLTQLAHGLPVGGELD
CHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC
YLDEGTLAQALRARRPVG
CCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA